prot_Ecto-sp13_S_contig13526.2803.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13526.2803.1
Unique Nameprot_Ecto-sp13_S_contig13526.2803.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length423
Homology
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BLAST of mRNA_Ecto-sp13_S_contig13526.2803.1 vs. uniprot
Match: D8LNW8_ECTSI (Histone acetyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNW8_ECTSI)

HSP 1 Score: 733 bits (1891), Expect = 1.850e-262
Identity = 362/422 (85.78%), Postives = 386/422 (91.47%), Query Frame = 0 
Query:    1 SEKNCAIQNCKLSAWQARLILGCTATPCNICQPVKDFINKSKMDYIKKGILNEHRPETAPVTEGPSPTGGSSFDANMDDLTSRLGSMSVLLQGSSQHDETTKLMEAMAAISIDSDTRQQRRPPAIGLQGPGAAFQVMGASVARDASNIFRIGIKNDDGSPKRKGTRFSSRLRDLKCNARAGQAVAETGDSARKRQYKNKSPVWRVERRDRNARFMEKHRYGYVFDTARWGGDMDDGAGESRTDRDDLGDGGDGAGPTTEDGGHDEAATRGGSATNATGTEHDENPCTSWDECMGGEETGPGPQRERGHRATADQTALNANIAGKNISVEGDQRKFLILLFHLHTCRSDGDGETCQVTKHCPALRRTWRHMKTCDTTVCPVAEAICTSLSSLVHHLYHCDKACRLCDYVRYVSCGDQHVGDDT 422
            SEK+CA+QNCKLSAWQ   +  CTATPCNICQPVKDFI KS+ D I KGILNEHRPE+AP+T GPSPTGGSS DA+MDDLTSRLGSMSVLLQGSSQ DETTKL+EAMAAISIDS+TRQQRRPPAIGL+GPGAAFQVMGASVARDAS+IFRIG K+DDGSPKR GTRFSSRLRD KC ARAGQAVAETGDSARKRQ KNKSPVWRVERRD+NARFMEKHRYGYV D ARWGGD++DGAG+SRTD DDLGDGGDG GP T+DGG+DEAATRGGSATNATGTEHDENPCT WD+CM GEETG G +  RG R TADQTALNANI GKN SVEGDQRKFLILL+HLHTCR+DGDGE CQVTKHCPA+RRTWRHMKTCD TVCP+AEAICTSLSSLVHHLYHCDKACRLCDYVRYV CGDQHVGD T
Sbjct:  171 SEKDCAVQNCKLSAWQLSHLKRCTATPCNICQPVKDFIKKSRTDCIDKGILNEHRPESAPITAGPSPTGGSSVDADMDDLTSRLGSMSVLLQGSSQDDETTKLLEAMAAISIDSNTRQQRRPPAIGLRGPGAAFQVMGASVARDASSIFRIGSKDDDGSPKRMGTRFSSRLRDFKCKARAGQAVAETGDSARKRQNKNKSPVWRVERRDKNARFMEKHRYGYVCDAARWGGDIEDGAGQSRTDSDDLGDGGDGEGPMTDDGGNDEAATRGGSATNATGTEHDENPCTIWDDCMEGEETGLGARGGRGRRVTADQTALNANIVGKNNSVEGDQRKFLILLYHLHTCRADGDGEMCQVTKHCPAMRRTWRHMKTCDATVCPIAEAICTSLSSLVHHLYHCDKACRLCDYVRYVGCGDQHVGDHT 592
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BLAST of mRNA_Ecto-sp13_S_contig13526.2803.1 vs. uniprot
Match: A0A6H5JVR0_9PHAE (TAZ-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVR0_9PHAE)

HSP 1 Score: 592 bits (1527), Expect = 8.900e-211
Identity = 306/367 (83.38%), Postives = 312/367 (85.01%), Query Frame = 0 
Query:   56 PETAPVTEGPSPTGGSSFDANMDDLTSRLGSMSVLLQGSSQHDETTKLMEAMAAISIDSDTRQQRRPPAIGLQGPGAAFQVMGASVARDASNIFRIGIKNDDGSPKRKGTRFSSRLRDLKCNARAGQAVAETGDSARKRQYKNKSPVWRVERRDRNARFMEKHRYGYVFDTARWGGDMDDGAGESRTDRDDLGDGGDGAGPTTEDGGHDEAATRGGSATNATGTEHDENPCTSWDECMGGEETGPGPQRERGHRATADQTALNANIAGKNISVEGDQRKFLILLFHLHTCRSDGDGETCQVTKHCPALRRTWRHMKTCDTTVCPVAEAICTSLSSLVHHLYHCDKACRLCDYVRYVSCGDQHVGDDT 422
            P   PVTEGPSPTGGSSFDANMDDLTSRLGSMSVLLQGSSQ DETTKLMEAMAAISIDSDT QQRRPPAIGL+GPGAAFQVMG  VARDASN FRIGIKN+DGSPKRKGTRFSSRLRDLKC AR GQ VAETGDSARKRQ KNKSPVWRVERRDRNARFM KHRYGYVFDTARWGGDMDDGA                             ATRGGSATNATGTEHDE+PCT WDECMGGEET PGPQ   G RA ADQTALNANI GKNISVEGDQRKFLILL+HLHTCR+DGDGETCQVTKHCPALR TWRHMKTC+ TVCPVAEAICT LSSLVHHLYHCDKACRLCD V YVSCGDQHVGDDT
Sbjct:   24 PILPPVTEGPSPTGGSSFDANMDDLTSRLGSMSVLLQGSSQDDETTKLMEAMAAISIDSDTWQQRRPPAIGLRGPGAAFQVMGDPVARDASNTFRIGIKNNDGSPKRKGTRFSSRLRDLKCKARDGQPVAETGDSARKRQNKNKSPVWRVERRDRNARFMGKHRYGYVFDTARWGGDMDDGA-----------------------------ATRGGSATNATGTEHDESPCTIWDECMGGEETEPGPQ---GGRAAADQTALNANIVGKNISVEGDQRKFLILLYHLHTCRADGDGETCQVTKHCPALRWTWRHMKTCEATVCPVAEAICTRLSSLVHHLYHCDKACRLCDCVGYVSCGDQHVGDDT 358
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13526.2803.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LNW8_ECTSI1.850e-26285.78Histone acetyltransferase n=1 Tax=Ectocarpus silic... [more]
A0A6H5JVR0_9PHAE8.900e-21183.38TAZ-type domain-containing protein n=1 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000197Zinc finger, TAZ-typeSMARTSM00551TAZ_2coord: 326..408
e-value: 0.0035
score: 3.2
IPR000197Zinc finger, TAZ-typePFAMPF02135zf-TAZcoord: 334..405
e-value: 1.9E-11
score: 44.3
IPR000197Zinc finger, TAZ-typePROSITEPS50134ZF_TAZcoord: 324..408
score: 8.57
IPR035898TAZ domain superfamilyGENE3D1.20.1020.10coord: 323..412
e-value: 8.8E-10
score: 40.3
IPR035898TAZ domain superfamilySUPERFAMILY57933TAZ domaincoord: 331..409

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13526contigEcto-sp13_S_contig13526:1182..4698 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13526.2803.1mRNA_Ecto-sp13_S_contig13526.2803.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13526 1182..4698 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13526.2803.1 ID=prot_Ecto-sp13_S_contig13526.2803.1|Name=mRNA_Ecto-sp13_S_contig13526.2803.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=423bp
SEKNCAIQNCKLSAWQARLILGCTATPCNICQPVKDFINKSKMDYIKKGI
LNEHRPETAPVTEGPSPTGGSSFDANMDDLTSRLGSMSVLLQGSSQHDET
TKLMEAMAAISIDSDTRQQRRPPAIGLQGPGAAFQVMGASVARDASNIFR
IGIKNDDGSPKRKGTRFSSRLRDLKCNARAGQAVAETGDSARKRQYKNKS
PVWRVERRDRNARFMEKHRYGYVFDTARWGGDMDDGAGESRTDRDDLGDG
GDGAGPTTEDGGHDEAATRGGSATNATGTEHDENPCTSWDECMGGEETGP
GPQRERGHRATADQTALNANIAGKNISVEGDQRKFLILLFHLHTCRSDGD
GETCQVTKHCPALRRTWRHMKTCDTTVCPVAEAICTSLSSLVHHLYHCDK
ACRLCDYVRYVSCGDQHVGDDT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000197Znf_TAZ
IPR035898TAZ_dom_sf