prot_Ecto-sp13_S_contig13522.2802.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13522.2802.1
Unique Nameprot_Ecto-sp13_S_contig13522.2802.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length74
Homology
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BLAST of mRNA_Ecto-sp13_S_contig13522.2802.1 vs. uniprot
Match: A0A6H5K1E2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1E2_9PHAE)

HSP 1 Score: 115 bits (288), Expect = 1.510e-31
Identity = 67/72 (93.06%), Postives = 70/72 (97.22%), Query Frame = 0 
Query:    1 MKIATMMVALVAAVASLAAVGNAFVMPPAGVAGRNAGQQALAPATSQPAPSRSSGASAVGALNVKIVLGEEE 72
            MK+ATMMVALVAA+ASLAA GNAFVMPPAGVAGRNAG+QALAPA SQPAPSRSSGASAVGALNVKIVLGEEE
Sbjct:    1 MKLATMMVALVAAIASLAAGGNAFVMPPAGVAGRNAGRQALAPAPSQPAPSRSSGASAVGALNVKIVLGEEE 72
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13522.2802.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K1E2_9PHAE1.510e-3193.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..73
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..23
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..23
score: 0.81
NoneNo IPR availableTMHMMTMhelixcoord: 4..26

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13522contigEcto-sp13_S_contig13522:1122..4505 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13522.2802.1mRNA_Ecto-sp13_S_contig13522.2802.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13522 1122..4505 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13522.2802.1 ID=prot_Ecto-sp13_S_contig13522.2802.1|Name=mRNA_Ecto-sp13_S_contig13522.2802.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=74bp
MKIATMMVALVAAVASLAAVGNAFVMPPAGVAGRNAGQQALAPATSQPAP
SRSSGASAVGALNVKIVLGEEEK*
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