mRNA_Ecto-sp13_S_contig10010.28.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig10010.28.1
Unique NamemRNA_Ecto-sp13_S_contig10010.28.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig10010.28.1 vs. uniprot
Match: A0A6H5KVK2_9PHAE (N-acetyltransferase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVK2_9PHAE)

HSP 1 Score: 546 bits (1408), Expect = 1.220e-193
Identity = 308/345 (89.28%), Postives = 314/345 (91.01%), Query Frame = 1 
Query:    1 MLLNLGGPLLASSHAALYTSVPSYGRLPPGVESAARMNAITQQSLGSSXXXXXXXXXXXXXXXPSSASSGPRLLHPSGSGPEGVPSSLFTFQPPRATRIERPTEVAPGASEGGHNGGSEDGAGQSAAAVITKAVASANEEALHVRLVEESDLPDVSALLAEVFEPNILIDPAELRSESSVERLEKANKYLKEMAYKK-----------------------ILRSIKSRCGKRLTRGDFALTSDALVLAVRDSRSSGSARATSAVPELGGDGAGDGGGGDAGDVVAVVELCLRQPDGWFPINGPFVPMTGWEPYMCNLAVAEKYRGNGYGKQLVRLCEGVAKKHWG 966
            MLLNLGGPLLASSHAALY SVPSYGRLPPGVESAARMNAITQQ LGSSXXXXXXXXXXXXXX PSSASSGPRLLHPSGSGPEGVPSSLFTFQPPRAT IERPTEVAPG +EGGHN GSEDGAG+SAAAVITKAVASA+EEALHV+LVEESDLPDVSALLAEVFEPNILIDPAELRSESSVERLEKANKYLKEMAYKK                       ILRSIKSRCGKRLTRGDFALTSDALVLAVRDSR +GSARATSAVPELGGDGAGD GGGDAGD+VAVVELCLRQPDGWFPINGPFVPMTGWEPYMCNLAVAEKYRGNGYGKQLVRLCEGVAKKHWG
Sbjct:    1 MLLNLGGPLLASSHAALYASVPSYGRLPPGVESAARMNAITQQRLGSSXXXXXXXXXXXXXXRPSSASSGPRLLHPSGSGPEGVPSSLFTFQPPRATPIERPTEVAPGTTEGGHNSGSEDGAGRSAAAVITKAVASADEEALHVKLVEESDLPDVSALLAEVFEPNILIDPAELRSESSVERLEKANKYLKEMAYKKVGGTHPREERECPLVVWSDTSCQILRSIKSRCGKRLTRGDFALTSDALVLAVRDSRPNGSARATSAVPELGGDGAGDAGGGDAGDIVAVVELCLRQPDGWFPINGPFVPMTGWEPYMCNLAVAEKYRGNGYGKQLVRLCEGVAKKHWG 345
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BLAST of mRNA_Ecto-sp13_S_contig10010.28.1 vs. uniprot
Match: D7FVP3_ECTSI (N-acetyltransferase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVP3_ECTSI)

HSP 1 Score: 256 bits (653), Expect = 3.480e-82
Identity = 125/130 (96.15%), Postives = 127/130 (97.69%), Query Frame = 1 
Query:  577 MAYKKILRSIKSRCGKRLTRGDFALTSDALVLAVRDSRSSGSARATSAVPELGGDGAGDGGGGDAGDVVAVVELCLRQPDGWFPINGPFVPMTGWEPYMCNLAVAEKYRGNGYGKQLVRLCEGVAKKHWG 966
            MAYKKILRSIKSRCGKRLTRGDFALTSDALVLAVRDSR +GSARATSAVPELGGDGAGDGGGGDAGD+VAVVELCLRQPDGW PINGPFVPMTGWEPYMCNLAV EKYRGNGYGKQLVRLCEGVAKKHWG
Sbjct:    1 MAYKKILRSIKSRCGKRLTRGDFALTSDALVLAVRDSRPNGSARATSAVPELGGDGAGDGGGGDAGDIVAVVELCLRQPDGWLPINGPFVPMTGWEPYMCNLAVTEKYRGNGYGKQLVRLCEGVAKKHWG 130
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BLAST of mRNA_Ecto-sp13_S_contig10010.28.1 vs. uniprot
Match: D7FVP4_ECTSI (N-acetyltransferase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVP4_ECTSI)

HSP 1 Score: 229 bits (584), Expect = 4.480e-69
Identity = 161/348 (46.26%), Postives = 199/348 (57.18%), Query Frame = 1 
Query:    1 MLLNLGGPLLASSHAALYTSVPSYGRL-PPGVESAARMNAITQQSLGSSXXXXXXXXXXXXXXXPSSASSGPRLLHPSGSGPEGVPSSLFTFQPPRATRIERPTEVAPGASEGGHNGGSEDGAGQSAAAVITKAVASANEEALHVRLVEESDLPDVSALLAEVFEPNILIDPAELRSESSV---ERLEKANKYLKEMAYKKILRSIKSRCGKRLTRGDFALTSDALVLAVRDSRSSGSARATSAVPELGGDGAGDGGGGD---AGDVVAVVELCLRQPDGWFPINGPFV-------------------PMTGWEPYMCNLAVAEKYRGNGYGKQLVRLCEGVAKKHWG 966
            MLL +GGPL+ S++A L+  + S G L PPG            Q  G++               P+SASSGPRLLHP GSGP+GVPSSLFTFQP R T  + P E           GG  D A  S+A V  +      E  L   L++ESDLPDVSALL EVFEP +++   E     SV     ++  N Y+K +AY +IL S++SRCG RLTRGDF  +SDALVLAVR   S+    +++ V +   DG  DGG G    A ++VAVVEL +R+PDG  P+N PF                    P   W+PYMCNLAVAE+YRGNGYGKQLVRLCE VAK  WG
Sbjct:    1 MLLTVGGPLV-SAYATLHPLLLSAGTLNPPG------------QHTGTTSITATGDCTRRQQTRPNSASSGPRLLHPRGSGPDGVPSSLFTFQP-RTTPKKYPQEKK-------RAGG--DSASTSSAPVAGE------ENVLRAGLMDESDLPDVSALLVEVFEPGVVLADGEFTGLESVILGAPIDMTNNYMKAVAYNEILYSLRSRCGNRLTRGDFDRSSDALVLAVRGPPSTSGKSSSTPVTQ---DGDADGGVGXXXXAAELVAVVELTIRKPDGSLPLNWPFPAPWRREARDLIVPLLYIEKPPEQWQPYMCNLAVAEEYRGNGYGKQLVRLCEHVAKNSWG 316
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BLAST of mRNA_Ecto-sp13_S_contig10010.28.1 vs. uniprot
Match: A0A836CNC1_9STRA (N-acetyltransferase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNC1_9STRA)

HSP 1 Score: 79.3 bits (194), Expect = 1.990e-13
Identity = 60/195 (30.77%), Postives = 88/195 (45.13%), Query Frame = 1 
Query:  412 NEEALHVRLVEESDLPDVSALLAEVFEPNILIDPAELRSESSVERLE----KANKYLKEMAYKKILRSIKSRCGKRLTRGDFALTSDALVLAVRDSRSSGSARATSAVPELGGDGAGDGGGGDAGDVVAVVELCLRQPDGWFPINGPFVPM-------TGWEPYMCNLAVAEKYRGNGYGKQLVRLCEGVAKKHW 963
            +E  L + L+E+ D+   + LL   F   + +       E  V+ L       N YL+  +Y +IL  IK R G++L       +  A++L V D  ++                           ++AVVEL LR PDG  P N P           +  EPY+CNLAV+E++RG G GKQLVRL E + +  W
Sbjct:   23 SERNLVLGLIEDRDVAQAAELLVNCFPFEVSLSTEAGFKEWEVQVLRIPVGLMNAYLRGFSYYEILLGIKLRMGEQLLNPQIDASGSAMILGVADPSTN--------------------------QIIAVVELELRIPDGTLPGNWPLPRFIKGQSAESHSEPYLCNLAVSERWRGQGIGKQLVRLSEHIVRNCW 191
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BLAST of mRNA_Ecto-sp13_S_contig10010.28.1 vs. uniprot
Match: A0A4D9DEA7_9STRA (N-acetyltransferase domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DEA7_9STRA)

HSP 1 Score: 62.8 bits (151), Expect = 1.580e-7
Identity = 32/71 (45.07%), Postives = 38/71 (53.52%), Query Frame = 1 
Query:  778 VVAVVELCLRQPDGWFPINGPFVPM---------TGWEPYMCNLAVAEKYRGNGYGKQLVRLCEGVAKKHW 963
            +VAVVELCLR+PD      G  +P              PY+CNLAV+  YRG G GK LVR+ E V    W
Sbjct:  125 LVAVVELCLRRPD------GNLIPSIRSSSLRYDAACRPYLCNLAVSPLYRGQGLGKALVRIAENVVSACW 189
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BLAST of mRNA_Ecto-sp13_S_contig10010.28.1 vs. uniprot
Match: B7FSR9_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FSR9_PHATC)

HSP 1 Score: 58.9 bits (141), Expect = 4.030e-6
Identity = 64/206 (31.07%), Postives = 99/206 (48.06%), Query Frame = 1 
Query:  418 EALHVRLVEESDLPDVSALLAEVFEPNILIDPAELRS-ESSVER--LEKANKYLKEMAYKKILRSIKSRCGKRLTRGDFALTSDALVLAVRD-SRSSGSARAT--SAVPELGGDGAGDGGGGDAG-DVVAVVELCLRQPDGWFPINGPFVPM-----TGW-----------EPYMCNLAVAEKYRGNGYGKQLVRLCEGVAKKHWG 966
            +   + L EE+DLPDVS  +   F  + +    ++ + E  + R  +E  N Y   +A+ ++L  ++SR   R+  G     SD  +  ++  SR+   + AT  S V  LG   AG+    D   DV+A VEL L+  D   P + P++         W           +PY+ NL VAE+YRG G G+ LVR  E ++K  WG
Sbjct:   94 DVFELALAEETDLPDVSRFIVTSFGADAIRVSQDMSTFEGMLMRPAVELVNGYSGIVAFAEVLAGLRSRLKTRIANG-----SDLSLPELKGRSRTEQISEATNDSIVLVLGRRHAGN----DWHIDVIASVELRLQLCDAKIPFSLPWLDRIERTAASWIGLGKNHARDLQPYLGNLCVAERYRGRGIGRALVRCVEDISKTKWG 290
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10010.28.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5KVK2_9PHAE1.220e-19389.28N-acetyltransferase domain-containing protein n=1 ... [more]
D7FVP3_ECTSI3.480e-8296.15N-acetyltransferase domain-containing protein n=1 ... [more]
D7FVP4_ECTSI4.480e-6946.26N-acetyltransferase domain-containing protein n=2 ... [more]
A0A836CNC1_9STRA1.990e-1330.77N-acetyltransferase domain-containing protein n=1 ... [more]
A0A4D9DEA7_9STRA1.580e-745.07N-acetyltransferase domain-containing protein n=2 ... [more]
B7FSR9_PHATC4.030e-631.07Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10010contigEcto-sp13_S_contig10010:3594..5806 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score256.9
Seed ortholog evalue1.2e-65
Seed eggNOG ortholog2880.D7FVP3
Model size969
Hectar predicted targeting categoryother localisation
Exons4
EggNOG free text desc.Acetyltransferase (GNAT) family
EggNOG OGs2CZCN@1,2S9Q8@2759
Ec32 ortholog descriptionAcetyltransferase (GNAT) domain protein
Ec32 orthologEc-01_006000.1
Cds size969
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462500.2763758-CDS-Ecto-sp13_S_contig10010:3593..40761681462500.2763758-CDS-Ecto-sp13_S_contig10010:3593..4076Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10010 3594..4076 +
1681462500.3331282-CDS-Ecto-sp13_S_contig10010:4488..45961681462500.3331282-CDS-Ecto-sp13_S_contig10010:4488..4596Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10010 4489..4596 +
1681462500.345244-CDS-Ecto-sp13_S_contig10010:4940..51951681462500.345244-CDS-Ecto-sp13_S_contig10010:4940..5195Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10010 4941..5195 +
1681462500.3536248-CDS-Ecto-sp13_S_contig10010:5683..58061681462500.3536248-CDS-Ecto-sp13_S_contig10010:5683..5806Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10010 5684..5806 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10010.28.1prot_Ecto-sp13_S_contig10010.28.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig10010 3594..5806 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig10010.28.1

>prot_Ecto-sp13_S_contig10010.28.1 ID=prot_Ecto-sp13_S_contig10010.28.1|Name=mRNA_Ecto-sp13_S_contig10010.28.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=323bp
MLLNLGGPLLASSHAALYTSVPSYGRLPPGVESAARMNAITQQSLGSSSS
SNSSGSIRRRRHRPSSASSGPRLLHPSGSGPEGVPSSLFTFQPPRATRIE
RPTEVAPGASEGGHNGGSEDGAGQSAAAVITKAVASANEEALHVRLVEES
DLPDVSALLAEVFEPNILIDPAELRSESSVERLEKANKYLKEMAYKKILR
SIKSRCGKRLTRGDFALTSDALVLAVRDSRSSGSARATSAVPELGGDGAG
DGGGGDAGDVVAVVELCLRQPDGWFPINGPFVPMTGWEPYMCNLAVAEKY
RGNGYGKQLVRLCEGVAKKHWG*
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mRNA from alignment at Ecto-sp13_S_contig10010:3594..5806+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig10010.28.1 ID=mRNA_Ecto-sp13_S_contig10010.28.1|Name=mRNA_Ecto-sp13_S_contig10010.28.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2213bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10010:3594..5806+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTTGCTGAACCTAGGAGGGCCTTTGCTGGCCTCGTCCCATGCTGCGCT
GTACACGTCAGTGCCTAGTTATGGGCGCCTGCCGCCCGGCGTAGAGTCGG
CGGCTCGCATGAACGCCATCACCCAGCAGAGCCTAGGCAGCAGCAGCAGC
AGCAACAGCAGCGGTAGCATCAGACGACGACGACACCGCCCCAGTTCAGC
GTCATCAGGCCCTCGACTACTGCATCCCAGCGGTAGTGGTCCCGAGGGCG
TGCCCTCTTCTCTCTTCACGTTCCAGCCACCAAGGGCTACCCGAATCGAA
CGCCCAACAGAGGTCGCACCTGGCGCCAGCGAAGGCGGCCATAACGGCGG
CAGCGAGGATGGCGCTGGGCAAAGTGCCGCTGCTGTAATCACGAAGGCTG
TGGCATCTGCTAATGAAGAAGCTCTACACGTAAGGCTGGTCGAAGAATCG
GACCTCCCTGATGTCTCGGCTCTGCTCGCGGAGGTGAGAGTGCAGTATGA
ACAGGTACCTTGGGTTGCCCAGAGGCCCATGCAGAAAGGGAGTCTAGTCT
CGAGAGCTACTCATAACTACTGCTGTAGCAGCCGCCCTGCGGAGTGCCCT
CGACGTGTCGCCTACATACATGGACTATAGCGTCAGTTGCCGTTGTTTCG
GTTTTCGTGACGCTCATGATACAGCTTGCGTGTTCCATCCTATATCAAAG
ACAGCAGCTCGATCAAGGACTAGCTACAGTTACGCATACCAAAGAACGGG
CAGCAGTGGGGTGATGCGGTAGATTCCGCTCGACTCCCGCCAGGACTATG
TGCATTTTCACTCCGCGTTGGATTTTACAGCCACGTGGTCTCGTAAAATT
CTTGTCTTGTGAAGATTTCGGTGGTGATGGCAACCGGAAAAACAGGTGTT
TGAACCAAACATTTTGATAGACCCCGCTGAATTGAGGAGCGAGTCATCCG
TGGAGCGGCTGGAGAAGGCCAACAAGTACCTGAAAGAGATGGCCTACAAA
AAGGTGGGCGGGACGCATCCAACAGATGAGAGGGAGTGCCCATTGGTGTT
TGGGTGGATATCTCATGCCAGGTCATACGAAGAAGAACCGCTGTAATTAC
TGAGGTTAACCGAAGGTAACCGTTTTGTCGCGGGTCATCGCGATGGAAAC
TAGCCCATGTATTAGTCGGTAAACCTGAGCTCTAACGTTTTCTCTCCTTT
CTCCCGACCTCTGTACGTGTATGTACACCATACACCGTCTCTCGCTTCGT
CGGTCCTTCCGTTTTCCTTTGTCTCCCTGGTGCGGCGTGTTCCGTATTGC
TGTCTCATCCCTCTCTTCGCCATTGTGCCGCCCGGCGTCCAATCCAGATT
TTGCGCTCCATCAAGTCTCGGTGTGGGAAGCGCCTTACACGCGGGGATTT
TGCTCTCACCAGCGATGCGCTCGTGCTAGCCGTAAGAGACAGCCGTTCCA
GTGGTAGTGCCCGCGCGACGTCCGCCGTGCCGGAGTTGGGCGGCGACGGT
GCTGGCGATGGTGGCGGTGGGGATGCTGGCGATGTCGTCGCGGTTGTGGA
GCTGTGTCTTCGTCAACCGGATGGCTGGTTCCCCATCAACGGGCCATTCG
TGGTGAGGTACTTCGCTGCTGTCCCACTCGACGATAGTGTTTATGTCTGT
GCTGCGCGAACACGACGGCGTTGTTATCGTGGCAAAGTTCCCGAATGGCC
GGCTGGGTAGCTGCAGACGTTCGGTAGAATTTTGGTTCTCTGGTGTTGTG
TTGCGTTCAAAGATAGCTGCTGCTTCCTTTTTGTATCCCTTGCGTCTGTA
GTTTGTCCAGGCGCTGACAAAGGCACCCCTTTTCGTGCCGTAGTCAGGTT
TGTGCTCTTGCTGTTCCCGTGACTGTTACAACTACTTTCTGTGTGTTTCT
TACATGCCTGGTCCTTCCGACCGAGACGGCACCCGCAGCACCGAGTAGCT
CCAATATATTTGTGTTGGTGTAGCCAACTGTCCTACCAGTACTGCTGCCT
AGTTCGGTCGATGAAGCAAAAGTCACAATCGCAACAAGGCTCCCCCCCCC
CCCCCCCCCCCAAACTCTTTGCTCTCTGTACGTGCAAAAGCCAATGACGG
GGTGGGAGCCATATATGTGCAACCTTGCCGTTGCCGAGAAATACCGAGGG
AATGGGTACGGCAAGCAGCTGGTGCGACTCTGCGAAGGCGTGGCCAAAAA
GCATTGGGGGTGA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10010:3594..5806+

>mRNA_Ecto-sp13_S_contig10010.28.1 ID=mRNA_Ecto-sp13_S_contig10010.28.1|Name=mRNA_Ecto-sp13_S_contig10010.28.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=969bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10010:3594..5806+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTTGCTGAACCTAGGAGGGCCTTTGCTGGCCTCGTCCCATGCTGCGCT
GTACACGTCAGTGCCTAGTTATGGGCGCCTGCCGCCCGGCGTAGAGTCGG
CGGCTCGCATGAACGCCATCACCCAGCAGAGCCTAGGCAGCAGCAGCAGC
AGCAACAGCAGCGGTAGCATCAGACGACGACGACACCGCCCCAGTTCAGC
GTCATCAGGCCCTCGACTACTGCATCCCAGCGGTAGTGGTCCCGAGGGCG
TGCCCTCTTCTCTCTTCACGTTCCAGCCACCAAGGGCTACCCGAATCGAA
CGCCCAACAGAGGTCGCACCTGGCGCCAGCGAAGGCGGCCATAACGGCGG
CAGCGAGGATGGCGCTGGGCAAAGTGCCGCTGCTGTAATCACGAAGGCTG
TGGCATCTGCTAATGAAGAAGCTCTACACGTAAGGCTGGTCGAAGAATCG
GACCTCCCTGATGTCTCGGCTCTGCTCGCGGAGGTGTTTGAACCAAACAT
TTTGATAGACCCCGCTGAATTGAGGAGCGAGTCATCCGTGGAGCGGCTGG
AGAAGGCCAACAAGTACCTGAAAGAGATGGCCTACAAAAAGATTTTGCGC
TCCATCAAGTCTCGGTGTGGGAAGCGCCTTACACGCGGGGATTTTGCTCT
CACCAGCGATGCGCTCGTGCTAGCCGTAAGAGACAGCCGTTCCAGTGGTA
GTGCCCGCGCGACGTCCGCCGTGCCGGAGTTGGGCGGCGACGGTGCTGGC
GATGGTGGCGGTGGGGATGCTGGCGATGTCGTCGCGGTTGTGGAGCTGTG
TCTTCGTCAACCGGATGGCTGGTTCCCCATCAACGGGCCATTCGTGCCAA
TGACGGGGTGGGAGCCATATATGTGCAACCTTGCCGTTGCCGAGAAATAC
CGAGGGAATGGGTACGGCAAGCAGCTGGTGCGACTCTGCGAAGGCGTGGC
CAAAAAGCATTGGGGGTGA
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