mRNA_Ecto-sp13_S_contig10261.280.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig10261.280.1
Unique NamemRNA_Ecto-sp13_S_contig10261.280.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig10261.280.1 vs. uniprot
Match: D8LG74_ECTSI (Helicase ATP-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG74_ECTSI)

HSP 1 Score: 614 bits (1584), Expect = 1.520e-217
Identity = 326/339 (96.17%), Postives = 329/339 (97.05%), Query Frame = 1
Query:    1 KNALLESPTGTGKTLCLLTASLAWQQRNSAMVASKPAPTQLAYDERPVTDLSRPRHEQQPYQENKPAAAAAMPSVIIYASRTHSQLGQVANELKNTVYRPRLSLLGSRDQLCVHEEVSQMKGGAKNHACSALVKARRCKYHRGTEDMVERAGXXXXXXXXXXXXAPWPEDGGVPDIEELVSLAKKHEFCPYYLGRGHAPRAELVLMPYNYLLDPGARRGIKINWSNAVVIFDEAHNLESVASDASSFELTSAQIAGAQDEALRCHNLCTEGGVDEQGGGGATQADNALLVKQALHLLEDAMEGVKLPASGKGFTQKGEYVYALFEHAGITFDTAQARFG 1017
            KNALLESPTGTGKTLCLLTASLAWQQRNSAMVASKPAPTQLAYDERPVTDLSRPRHEQQPYQENKPA AAAMPSVIIYASRTHSQLGQVANELKNTVYRPRLSLLGSRDQLCVHEEVSQMKGGAKNHACSALVKARRCKYHRGTEDMVERAGXXXXXXXXXXXX P  +   VPDIEELVSLAKKHEFCPYYLGRGHAPRAELVLMPYNYLLDPG RRGIKINWSNAVVIFDEAHNLESVASDASSFELTSAQIAGAQ+EALRCHNLCTEGGVDE+GGGGATQADNALLVKQALHLLEDAMEGVKLPASGKGFTQKGEYVYALFEHAGITFDTAQA  G
Sbjct:    2 KNALLESPTGTGKTLCLLTASLAWQQRNSAMVASKPAPTQLAYDERPVTDLSRPRHEQQPYQENKPALAAAMPSVIIYASRTHSQLGQVANELKNTVYRPRLSLLGSRDQLCVHEEVSQMKGGAKNHACSALVKARRCKYHRGTEDMVERAGXXXXXXXXXXXXPP--DQSTVPDIEELVSLAKKHEFCPYYLGRGHAPRAELVLMPYNYLLDPGTRRGIKINWSNAVVIFDEAHNLESVASDASSFELTSAQIAGAQEEALRCHNLCTEGGVDEEGGGGATQADNALLVKQALHLLEDAMEGVKLPASGKGFTQKGEYVYALFEHAGITFDTAQAWLG 338          
BLAST of mRNA_Ecto-sp13_S_contig10261.280.1 vs. uniprot
Match: A0A6H5LCY1_9PHAE (Helicase ATP-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LCY1_9PHAE)

HSP 1 Score: 340 bits (871), Expect = 2.550e-114
Identity = 188/277 (67.87%), Postives = 189/277 (68.23%), Query Frame = 1
Query:    1 KNALLESPTGTGKTLCLLTASLAWQQRNSAMVASKPAPTQLAYDERPVTDLSRPRHEQQPYQENKPAAAAAMPSVIIYASRTHSQLGQVANELKNTVYRPRLSLLGSRDQLCVHEEVSQMKGGAKNHACSALVKARRCKYHRGTEDMVERAGXXXXXXXXXXXXAPWPEDGGVPDIEELVSLAKKHEFCPYYLGRGHAPRAELVLMPYNYLLDPGARRGIKINWSNAVVIFDEAHNLESVASDASSFELTSAQIAGAQDEALRCHNLCTEGGVDEQG 831
            KNALLESPTGTGKTLCLLTASLAWQQRNSAMVASKPAPTQLAYDERPVTDLSRPRHEQQPYQENKP  AAAMPSVIIYASRTHSQLGQV                                                                                    PDIEELVSLAKKHEFCPYYLGRGHAPRAELVLMPYNYLLDPG RRGIKINW+NAVVIFDEAHNLESVASDASSFELTSAQIAGAQDEALRCHNLCTEGGVDE G
Sbjct:   36 KNALLESPTGTGKTLCLLTASLAWQQRNSAMVASKPAPTQLAYDERPVTDLSRPRHEQQPYQENKPTTAAAMPSVIIYASRTHSQLGQV------------------------------------------------------------------------------------PDIEELVSLAKKHEFCPYYLGRGHAPRAELVLMPYNYLLDPGTRRGIKINWTNAVVIFDEAHNLESVASDASSFELTSAQIAGAQDEALRCHNLCTEGGVDEVG 228          
BLAST of mRNA_Ecto-sp13_S_contig10261.280.1 vs. uniprot
Match: A0A836CNR1_9STRA (Helicase C-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNR1_9STRA)

HSP 1 Score: 250 bits (638), Expect = 3.360e-73
Identity = 161/340 (47.35%), Postives = 193/340 (56.76%), Query Frame = 1
Query:    4 NALLESPTGTGKTLCLLTASLAWQQRNSAMVASKPAPTQLAYDERPVTDLSRPRHEQQPYQENKPAAAAAMPS-VIIYASRTHSQLGQVANELKNTVYRPRLSLLGSRDQLCVHEEVSQMKGGAKNHACSALVKARRCKYHRGTEDMVERAGXXXXXXXXXXXXAPWPEDGGVPDIEELVSLAKKHEFCPYYLGRGHAPRAELVLMPYNYLLDPGARRGIKINWSNAVVIFDEAHNLESVASDASSFELTSAQIAGAQDEALRCHNLCTEGGVDEQGGGGATQAD--NALLVKQALHLLEDAMEG----VKLPASG-KGFTQKGEYVYALFEHAGITFDT 999
            NALLESPTGTGKTLCLL ++LAWQ  N A  A      QL+     +  L                         IIYASRTHSQL QVA ELK+T YRPRL+LLGSR+QLCVH+E++Q++GG  N AC AL   R C +HR  +     AG               P    V DIEEL +  +   FCPYYL RG A  A+LVLMPYNYLLD  ARR +++ W  AVVI DEAHNLE VAS+++SFEL+S  +AGA+ E  RC      G   + GGGGA   D    L V  AL  L D +E     V+LPA G KG + KG Y++ L     IT DT
Sbjct:   37 NALLESPTGTGKTLCLLCSALAWQAHNKAQQAR-----QLSRGGGSMQQLGXXXXXXXXXXXXXXXXXXXXXRCTIIYASRTHSQLSQVARELKSTAYRPRLALLGSREQLCVHKEIAQLRGGQLNAACQALASRRACAHHRALD-----AGAG-------------PPADAVLDIEELAARGRAEGFCPYYLSRGAAADADLVLMPYNYLLDAAARRALRLAWPGAVVILDEAHNLEGVASESASFELSSYDVAGARVELQRCVAALRRG---DGGGGGADAGDVEGTLGVYHALLKLMDGLENMLDSVRLPAGGDKGVSHKGVYLFDLLRTVDITADT 350          
BLAST of mRNA_Ecto-sp13_S_contig10261.280.1 vs. uniprot
Match: A0A1D6NL73_MAIZE (Regulator of telomere elongation helicase 1 n=2 Tax=Zea mays TaxID=4577 RepID=A0A1D6NL73_MAIZE)

HSP 1 Score: 223 bits (567), Expect = 5.120e-66
Identity = 137/341 (40.18%), Postives = 189/341 (55.43%), Query Frame = 1
Query:    1 KNALLESPTGTGKTLCLLTASLAWQQRNSAMVA---SKPAPTQLAYDERP-VTDLSRPRHEQQPYQENKPAAAAAMPSVIIYASRTHSQLGQVANELKNTVYRPRLSLLGSRDQLCVHEEVSQMKGGAKNHACSALVKARRCKYHRGTEDMVERAGXXXXXXXXXXXXAPWPEDGGVP-DIEELVSLAKKHEFCPYYLGRGHAPRAELVLMPYNYLLDPGARRGIK-INWSNAVVIFDEAHNLESVASDASSFELTSAQIAGAQDEALRCHNLCTEGGVDEQGGGGATQADNALLVKQALHLLEDAMEGVKLPASGKGFTQKGEYVYALFEHAGITFDTAQ 1005
            KNALLESPTGTGKTLCLL ASLAW++     +          QL Y  +P  +  S     Q+  Q   P        VIIYASRTHSQL QV  ELK T YRP++++LGSR+Q+C+H+EVS++ G A+N+AC  L K RRC ++    + ++                  PE G  P DIE+L+++ +    CPYY+ R  +   +++  PYNYL+DPG RR +  I W NAV+IFDEAHNLES+ +DA+SF+L    +     EA  C  LC+     E         +N  ++K  L  LE  +  + L  S  G+T+ G Y+Y       IT DT++
Sbjct:   36 KNALLESPTGTGKTLCLLCASLAWRRTFGEFLRVGRGGGGTKQLPYGSQPSASQQSEDSTSQKQQQSRYP--------VIIYASRTHSQLRQVIKELKATSYRPKMAVLGSREQMCIHDEVSKLHGRAQNNACHFLCKKRRCPHNNHVAEFIKNK----------------PELGNEPFDIEDLINIGRHKGPCPYYISRELSKSVDILFAPYNYLIDPGNRRSLNGIPWDNAVLIFDEAHNLESICADAASFDLFPNNLTACIAEAHECIKLCSAKRSIENSADKQFDPENYAILKALLMALEKKIAEL-LIGSELGYTKAGSYIYDFLSELNITSDTSK 351          
BLAST of mRNA_Ecto-sp13_S_contig10261.280.1 vs. uniprot
Match: A0A833QJ34_9POAL (Regulator of telomere elongation helicase 1 n=1 Tax=Carex littledalei TaxID=544730 RepID=A0A833QJ34_9POAL)

HSP 1 Score: 232 bits (591), Expect = 2.450e-65
Identity = 137/336 (40.77%), Postives = 195/336 (58.04%), Query Frame = 1
Query:    1 KNALLESPTGTGKTLCLLTASLAWQQRNSAMVASKPAPTQLAYDERPVTDLSRPRHEQQPYQENKPAAAAAMPSVIIYASRTHSQLGQVANELKNTVYRPRLSLLGSRDQLCVHEEVSQMKGGAKNHACSALVKARRCKYHRGTEDMVERAGXXXXXXXXXXXXAPWPEDGGVP-DIEELVSLAKKHEFCPYYLGRGHAPRAELVLMPYNYLLDPGARRGIK-INWSNAVVIFDEAHNLESVASDASSFELTSAQIAGAQDEALRCHNLCTEGGVDEQGGGGATQADNALLVKQALHLLEDAMEGVKLPASGKGFTQKGEYVYALFEHAGITFDTA 1002
            KNALLESPTGTGKTL LL A+LAW+ ++    ++ P+       E      S+P   Q        +  + +P VIIY SRTHSQL QV  ELK + YRP++++LGSR+Q+C+H++V  ++G A+NHAC  + K R+C++H    + V+R                    G  P DIE+LV++ +    CPYY+ R     A+++  PYNYL+DPG RR +  I WS AV+IFDEAHNLES+ +DA+SF+L S  IA    EA +C +LC +  V E+        DN  ++K  L  LE  +  V + +  +GFT+ G Y+Y       ITF+TA
Sbjct:   36 KNALLESPTGTGKTLSLLCATLAWR-KSFGEFSTNPS-------EEKGWGSSQPSSSQSVSSTPSDSQRSGLP-VIIYTSRTHSQLKQVIRELKTSNYRPKMAILGSREQMCIHDDVRLLRGKAQNHACQYMCKKRKCRHHPPVSEFVKRHNPL----------------GNEPFDIEDLVNIGRTKGPCPYYVSRELHKSADILFAPYNYLIDPGNRRSLTGIPWSKAVLIFDEAHNLESICADAASFDLPSTYIASCISEANQCIDLCGKKLVTEKSADKQFDPDNYAILKALLTKLEKKVGEVVIQSKEQGFTRPGSYIYEFLSDLNITFETA 346          
BLAST of mRNA_Ecto-sp13_S_contig10261.280.1 vs. uniprot
Match: UPI001929A55A (regulator of telomere elongation helicase 1 homolog isoform X3 n=1 Tax=Dioscorea cayennensis subsp. rotundata TaxID=55577 RepID=UPI001929A55A)

HSP 1 Score: 228 bits (582), Expect = 4.980e-65
Identity = 134/337 (39.76%), Postives = 187/337 (55.49%), Query Frame = 1
Query:    4 NALLESPTGTGKTLCLLTASLAWQQR--NSAMVASKPAPTQLAYDERPVTDLSRPRHEQQPYQENKPAAAAAMPSVIIYASRTHSQLGQVANELKNTVYRPRLSLLGSRDQLCVHEEVSQMKGGAKNHACSALVKARRCKYHRGTEDMVERAGXXXXXXXXXXXXAPWPEDGGVP-DIEELVSLAKKHEFCPYYLGRGHAPRAELVLMPYNYLLDPGARRGIK-INWSNAVVIFDEAHNLESVASDASSFELTSAQIAGAQDEALRCHNLCTEGGVDEQGGGGATQADNALLVKQALHLLEDAMEGVKLPASGKGFTQKGEYVYALFEHAGITFDTA 1002
            NALLESPTGTGKTLCLL ASLAW++     +   S+               + RPR                +P VI+Y SRTHSQL QV  ELK + YRP++++LGSR+Q+C+H+EV  ++G A+N+AC  L K RRC++H    D ++                  PE G  P DIE+LV++ +    CPYY+ R      +++  PYNYL+DPG RR +  I+W N V+IFDEAHNLES+ +DA+SFEL +  +     EA +C +LC       Q     +  DN  ++K  L  LE  +  V + +   GFT+ G Y+Y   E   IT++TA
Sbjct:   37 NALLESPTGTGKTLCLLCASLAWRRSLGEFSTTVSEEKGCSSESQRSGSQSMERPRSH--------------LP-VIVYTSRTHSQLKQVIRELKASNYRPKMAVLGSREQMCIHDEVHLLRGRAQNNACHYLCKKRRCQHHNRVSDYMKNH----------------PELGNEPFDIEDLVNIGRTKRVCPYYVSRDLHKMVDILFAPYNYLIDPGNRRSLTGIDWRNTVLIFDEAHNLESICADAASFELPTGYLTACISEAKQCVDLCIRKREIYQSADKESDPDNYAILKALLLKLEKRIYEVPITSKELGFTRPGHYIYEFLEELNITYETA 342          
BLAST of mRNA_Ecto-sp13_S_contig10261.280.1 vs. uniprot
Match: A0A3L6FP76_MAIZE (Helicase ATP-binding domain-containing protein (Fragment) n=1 Tax=Zea mays TaxID=4577 RepID=A0A3L6FP76_MAIZE)

HSP 1 Score: 223 bits (567), Expect = 8.090e-65
Identity = 137/341 (40.18%), Postives = 189/341 (55.43%), Query Frame = 1
Query:    1 KNALLESPTGTGKTLCLLTASLAWQQRNSAMVA---SKPAPTQLAYDERP-VTDLSRPRHEQQPYQENKPAAAAAMPSVIIYASRTHSQLGQVANELKNTVYRPRLSLLGSRDQLCVHEEVSQMKGGAKNHACSALVKARRCKYHRGTEDMVERAGXXXXXXXXXXXXAPWPEDGGVP-DIEELVSLAKKHEFCPYYLGRGHAPRAELVLMPYNYLLDPGARRGIK-INWSNAVVIFDEAHNLESVASDASSFELTSAQIAGAQDEALRCHNLCTEGGVDEQGGGGATQADNALLVKQALHLLEDAMEGVKLPASGKGFTQKGEYVYALFEHAGITFDTAQ 1005
            KNALLESPTGTGKTLCLL ASLAW++     +          QL Y  +P  +  S     Q+  Q   P        VIIYASRTHSQL QV  ELK T YRP++++LGSR+Q+C+H+EVS++ G A+N+AC  L K RRC ++    + ++                  PE G  P DIE+L+++ +    CPYY+ R  +   +++  PYNYL+DPG RR +  I W NAV+IFDEAHNLES+ +DA+SF+L    +     EA  C  LC+     E         +N  ++K  L  LE  +  + L  S  G+T+ G Y+Y       IT DT++
Sbjct:  102 KNALLESPTGTGKTLCLLCASLAWRRTFGEFLRVGRGGGGTKQLPYGSQPSASQQSEDSTSQKQQQSRYP--------VIIYASRTHSQLRQVIKELKATSYRPKMAVLGSREQMCIHDEVSKLHGRAQNNACHFLCKKRRCPHNNHVAEFIKNK----------------PELGNEPFDIEDLINIGRHKGPCPYYISRELSKSVDILFAPYNYLIDPGNRRSLNGIPWDNAVLIFDEAHNLESICADAASFDLFPNNLTACIAEAHECIKLCSAKRSIENSADKQFDPENYAILKALLMALEKKIAEL-LIGSELGYTKAGSYIYDFLSELNITSDTSK 417          
BLAST of mRNA_Ecto-sp13_S_contig10261.280.1 vs. uniprot
Match: UPI00192A13E8 (regulator of telomere elongation helicase 1 homolog isoform X1 n=2 Tax=Dioscorea cayennensis subsp. rotundata TaxID=55577 RepID=UPI00192A13E8)

HSP 1 Score: 228 bits (582), Expect = 7.470e-64
Identity = 134/337 (39.76%), Postives = 187/337 (55.49%), Query Frame = 1
Query:    4 NALLESPTGTGKTLCLLTASLAWQQR--NSAMVASKPAPTQLAYDERPVTDLSRPRHEQQPYQENKPAAAAAMPSVIIYASRTHSQLGQVANELKNTVYRPRLSLLGSRDQLCVHEEVSQMKGGAKNHACSALVKARRCKYHRGTEDMVERAGXXXXXXXXXXXXAPWPEDGGVP-DIEELVSLAKKHEFCPYYLGRGHAPRAELVLMPYNYLLDPGARRGIK-INWSNAVVIFDEAHNLESVASDASSFELTSAQIAGAQDEALRCHNLCTEGGVDEQGGGGATQADNALLVKQALHLLEDAMEGVKLPASGKGFTQKGEYVYALFEHAGITFDTA 1002
            NALLESPTGTGKTLCLL ASLAW++     +   S+               + RPR                +P VI+Y SRTHSQL QV  ELK + YRP++++LGSR+Q+C+H+EV  ++G A+N+AC  L K RRC++H    D ++                  PE G  P DIE+LV++ +    CPYY+ R      +++  PYNYL+DPG RR +  I+W N V+IFDEAHNLES+ +DA+SFEL +  +     EA +C +LC       Q     +  DN  ++K  L  LE  +  V + +   GFT+ G Y+Y   E   IT++TA
Sbjct:   37 NALLESPTGTGKTLCLLCASLAWRRSLGEFSTTVSEEKGCSSESQRSGSQSMERPRSH--------------LP-VIVYTSRTHSQLKQVIRELKASNYRPKMAVLGSREQMCIHDEVHLLRGRAQNNACHYLCKKRRCQHHNRVSDYMKNH----------------PELGNEPFDIEDLVNIGRTKRVCPYYVSRDLHKMVDILFAPYNYLIDPGNRRSLTGIDWRNTVLIFDEAHNLESICADAASFELPTGYLTACISEAKQCVDLCIRKREIYQSADKESDPDNYAILKALLLKLEKRIYEVPITSKELGFTRPGHYIYEFLEELNITYETA 342          
BLAST of mRNA_Ecto-sp13_S_contig10261.280.1 vs. uniprot
Match: UPI001B7E4DB3 (regulator of telomere elongation helicase 1 homolog isoform X1 n=2 Tax=Juglans microcarpa x Juglans regia TaxID=2249226 RepID=UPI001B7E4DB3)

HSP 1 Score: 222 bits (565), Expect = 1.510e-63
Identity = 128/333 (38.44%), Postives = 187/333 (56.16%), Query Frame = 1
Query:    4 NALLESPTGTGKTLCLLTASLAWQQRNSAMVASKPAPTQLAYDERPVTDLSRPRHEQQPYQENKPAAAAAMPSVIIYASRTHSQLGQVANELKNTVYRPRLSLLGSRDQLCVHEEVSQMKGGAKNHACSALVKARRCKYHRGTEDMVERAGXXXXXXXXXXXXAPWPEDGGVP-DIEELVSLAKKHEFCPYYLGRGHAPRAELVLMPYNYLLDPGARRGIKINWSNAVVIFDEAHNLESVASDASSFELTSAQIAGAQDEALRCHNLCTEGGVDEQGGGGATQADNALLVKQALHLLEDAMEGVKLPASGKGFTQKGEYVYALFEHAGITFDT 999
            NALLESPTGTGKTLCLL A+LAW++            +    +  P   LS      QP + N PA        IIY SRTHSQ+ QV  ELK T YRP++ +LGSR+QLC+H+EVS ++G  + ++C +L + R+C +H    + +++                 P  G  P DIE+LV++ ++   CPYY+ R     A++   PYNYL+DPG R+ +K++W+N+++IFDEAHNLE + +DA+SFEL S  +     EA  C +L  E    E+    +   DN  +++  L  LE  +  V + +   GFT+ G Y+Y L     IT +T
Sbjct:   37 NALLESPTGTGKTLCLLCATLAWRKSLGGFSTGMSVKSSQKEESEPDVSLS------QPVRSNLPA--------IIYTSRTHSQIRQVIQELKRTRYRPKMVVLGSREQLCIHDEVSSLRGKTQTNSCHSLCRKRKCSHHSRVAEYMKKN----------------PHLGDEPIDIEDLVNVGRRFGPCPYYVSRELHRIADIFFAPYNYLIDPGNRKSLKVDWNNSILIFDEAHNLEGLCADAASFELPSWLLKACIIEAKHCIDLSVE--RREESNDKSRNPDNFAILRALLLKLEKRIAEVPIQSKELGFTKPGPYIYELLSELNITHET 337          
BLAST of mRNA_Ecto-sp13_S_contig10261.280.1 vs. uniprot
Match: A0A024T824_9STRA (Helicase ATP-binding domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024T824_9STRA)

HSP 1 Score: 220 bits (561), Expect = 1.980e-63
Identity = 129/334 (38.62%), Postives = 182/334 (54.49%), Query Frame = 1
Query:    1 KNALLESPTGTGKTLCLLTASLAWQQRNSAMVASKPAPTQLAYDERPVTDLSRPRHEQQPYQENKPAAAAAMPSVIIYASRTHSQLGQVANELKNTVYRPRLSLLGSRDQLCVHEEVSQMKGGAKNHACSALVKARRCKYHRGTEDMVERAGXXXXXXXXXXXXAPWPEDGGVPDIEELVSLAKKHEFCPYYLGRGHAPRAELVLMPYNYLLDPGARRGIKINWSNAVVIFDEAHNLESVASDASSFELTSAQIAGAQDEALRCHNLCTEGGVDEQGGGGATQADNALLVKQALHLLEDAMEGVKLPASGKGFTQKGEYVYALFEHAGITFDTA 1002
            +NALLESPTGTGKTLCLL A+LAW+      + +    T++ Y+   +        + +  ++  P         IIYASRTHSQL QV  ELK T Y+P++++LGSR+ LCVH E+S M+G  +NH C   V+A +C Y  G +   +                       + DIEELV+  K  E CP+YL R     A++V MPYNYL++P  R  + +   NAV+IFDEAHN+ESVA+DA+S+ L+S  + G   E   CHNL   G + + G      + +AL +K  L  +   +    L   G G T+ G +++  F    ITFDTA
Sbjct:   36 QNALLESPTGTGKTLCLLCATLAWRIHRLKQLKAASKRTKVQYES--IDGGGADDDDDKALRDKLPK--------IIYASRTHSQLKQVVKELKQTPYKPKVAILGSREHLCVHPEISSMRGTQQNHTCRQAVRAHKCTYKTGYDRQAKTKSAALP----------------ILDIEELVTTMKDREVCPFYLSRDMLVSADIVFMPYNYLVEPFVRNSLGVTLENAVLIFDEAHNVESVATDAASYSLSSLDVQGCIKEVEECHNLIVSGRI-QPGEDTYLNSQSALTLKSLLLEIHTGLNTFPLNDRG-GCTKPGAFIFEFFNQFNITFDTA 341          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10261.280.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LG74_ECTSI1.520e-21796.17Helicase ATP-binding domain-containing protein n=1... [more]
A0A6H5LCY1_9PHAE2.550e-11467.87Helicase ATP-binding domain-containing protein n=1... [more]
A0A836CNR1_9STRA3.360e-7347.35Helicase C-terminal domain-containing protein n=1 ... [more]
A0A1D6NL73_MAIZE5.120e-6640.18Regulator of telomere elongation helicase 1 n=2 Ta... [more]
A0A833QJ34_9POAL2.450e-6540.77Regulator of telomere elongation helicase 1 n=1 Ta... [more]
UPI001929A55A4.980e-6539.76regulator of telomere elongation helicase 1 homolo... [more]
A0A3L6FP76_MAIZE8.090e-6540.18Helicase ATP-binding domain-containing protein (Fr... [more]
UPI00192A13E87.470e-6439.76regulator of telomere elongation helicase 1 homolo... [more]
UPI001B7E4DB31.510e-6338.44regulator of telomere elongation helicase 1 homolo... [more]
A0A024T824_9STRA1.980e-6338.62Helicase ATP-binding domain-containing protein n=1... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10261contigEcto-sp13_S_contig10261:1058..5588 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score622.9
Seed ortholog evalue9.1e-176
Seed eggNOG ortholog2880.D8LG74
Model size1017
KEGG koko:K11136
Hectar predicted targeting categoryother localisation
Exons6
EggNOG free text desc.ATP-dependent DNA helicase activity
EggNOG OGsCOG1199@1,KOG1132@2759
EC3.6.4.12
Cds size1017
COG Functional cat.KL
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03032
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10261.280.1prot_Ecto-sp13_S_contig10261.280.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig10261 1058..5588 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462519.521112-CDS-Ecto-sp13_S_contig10261:1057..11621681462519.521112-CDS-Ecto-sp13_S_contig10261:1057..1162Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10261 1058..1162 +
1681462519.5329096-CDS-Ecto-sp13_S_contig10261:1773..19321681462519.5329096-CDS-Ecto-sp13_S_contig10261:1773..1932Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10261 1774..1932 +
1681462519.5417485-CDS-Ecto-sp13_S_contig10261:2499..27511681462519.5417485-CDS-Ecto-sp13_S_contig10261:2499..2751Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10261 2500..2751 +
1681462519.5503616-CDS-Ecto-sp13_S_contig10261:3542..36891681462519.5503616-CDS-Ecto-sp13_S_contig10261:3542..3689Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10261 3543..3689 +
1681462519.5601852-CDS-Ecto-sp13_S_contig10261:4629..47911681462519.5601852-CDS-Ecto-sp13_S_contig10261:4629..4791Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10261 4630..4791 +
1681462519.574693-CDS-Ecto-sp13_S_contig10261:5396..55881681462519.574693-CDS-Ecto-sp13_S_contig10261:5396..5588Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10261 5397..5588 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig10261.280.1

>prot_Ecto-sp13_S_contig10261.280.1 ID=prot_Ecto-sp13_S_contig10261.280.1|Name=mRNA_Ecto-sp13_S_contig10261.280.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=339bp
KNALLESPTGTGKTLCLLTASLAWQQRNSAMVASKPAPTQLAYDERPVTD
LSRPRHEQQPYQENKPAAAAAMPSVIIYASRTHSQLGQVANELKNTVYRP
RLSLLGSRDQLCVHEEVSQMKGGAKNHACSALVKARRCKYHRGTEDMVER
AGGGGRGGGGGGGGAPWPEDGGVPDIEELVSLAKKHEFCPYYLGRGHAPR
AELVLMPYNYLLDPGARRGIKINWSNAVVIFDEAHNLESVASDASSFELT
SAQIAGAQDEALRCHNLCTEGGVDEQGGGGATQADNALLVKQALHLLEDA
MEGVKLPASGKGFTQKGEYVYALFEHAGITFDTAQARFG
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mRNA from alignment at Ecto-sp13_S_contig10261:1058..5588+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig10261.280.1 ID=mRNA_Ecto-sp13_S_contig10261.280.1|Name=mRNA_Ecto-sp13_S_contig10261.280.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4531bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10261:1058..5588+ (Ectocarpus species13 EcNAP12_S_4_19m)
AAGAATGCCCTCCTGGAAAGCCCGACCGGTACCGGCAAGACGCTATGCCT ACTCACGGCCTCTCTCGCTTGGCAACAACGGAACTCGGCCATGGTGGCCT CCAAGGTAGAAACAACGGCCATGTTCTCGAAGAGGGAAAAATAAACAGCC TGCACCACAGGGCCTTCAACGAAGCAGCGTTGGTGTGCAGTATGAACCGT TCAGAGCAAACGGGTAAATATTTTGTACCTATGATTCGGTTGGTAAAAGA CGAGGCATGAACACCCCCGTTTCGTGGTAGAAGTAATGTGTTTTGTGCCA GAGCTCTTTCCGCGGGGCGTACATATGGCTCATATCCTCGACAGGGCGAA GGCAGATCGACATATATGTACTATGTGCATATGTGTAGCACTCCTTTACT CCGTGGTTTATTTAATCCGTCCTTTTCCGCCGCTTGACAGTTTAACTTAT CCCCTTCTGAGGGTGCTTGTCGTGGCCCCCCCCCCCCGGCTGCCCCCCCC CCCCCCCCCCCCATCGCACGCCTAGGACGGGGACTAACCCAACAAGCATG AAGAAAGGGCGCCGCCCGACGGTTGGAATTGATGTTCTCTATGTTAAGAG TACGAAAGTCAGTGAGTGAGAGCGAGGTAATCTGCCTCCAAGGGTTGAGT GATCGTATGTTACCATCCACGGCGAGGACCAAATCGTTACACGCCTCCCC CGTCCCACGCACGCAGCCTGCCCCTACACAGCTTGCGTACGACGAGCGAC CGGTCACCGACCTGTCCCGCCCGCGACACGAGCAACAGCCGTACCAGGAG AACAAACCTGCCGCAGCCGCGGCCATGCCCTCCGTCATCATCTACGCCTC GCGCACCCACAGCCAGCTAGGCCAGGTGTGCTGGTCCCAGGGTGGTGGCT GTTTTTCATTGGTGTAGGCGCTGGTGGTGTGGCTGTGGTGACATCGGGTA GTCGCTGTGTGTTTGGGGGGCACCGTAGGCGGACAGAGCACCACCCACGC CCCGTTCATCGGGTCAGTTTTCGTAGTCCGATGTGTTGTTGTGGAACTCC TTGCCGACCCTAAGGTGCAGGAAGTAGAACGCAATGGTGTATACAGCTGC AAGAACAACCAAGCCGAGAGCTTGGTAAAAACAAACGGTCAAGGAGGAAT TTGTCCCCGTGACCTCCACACTTGAGTCACACGGGGCAATAACCGGCAAC TTCTGAAACACCACGAAAATCGGAAGCACAAAACGAAAAGGTTCGCATCG TATTTCTGTGATTGAATATTTTCTTCAACGCAACAAAAAATCTTCAAACG GAAGGGTAGCATTTCTGTAAATATCAGCAATTTTTCTCCAACCCAACAGA ACCCCCCTTTTGAACGAAAGGGTAGTGTTTTTGTGATTGTGCGTGTACTT TCTACAAAGCAGACCAACCCCCTTCACCAAAAATCCAAAAAGGTGGCGAA CGAGCTGAAGAACACGGTGTACCGCCCGAGGCTCTCCCTCCTGGGCTCTC GCGACCAGCTCTGTGTCCACGAGGAGGTTTCCCAGATGAAGGGAGGCGCC AAGAATCACGCCTGCTCGGCCCTCGTCAAGGCCAGGCGTTGCAAGTACCA CCGCGGGACGGAGGACATGGTGGAGCGGGCGGGGGGGGGGGGGCGGGGTG GGGGGGGGGGGGGGGGGGGGGCCCCCTGGCCAGAGGACGGGGGGGTGGGC TGCGGGGATGGGGAGGGGGGGGGTGGGNNNNNNNNNNTGGTTGCGGGAGG GGGGGGGAGCGGGCCCCCTGACCAGAGCACGGTGAGGTCGGCTTCGGAGT CCGGGGTCTTTCTTGGGGGGGGGGGGCGTCCGAAGCGGTGTTGCGTTGTG GGTCCCGTGGTTGGTGGTGCTGTCCGCACCGTGCTAAGCTCATGAAATGA ACAGGATCACGCACGCAAACACATGTGGCGCCCCCTCACCGGGGTCCTAG ATCATGGCCTTTTGAAGCAGTTTGTGTTTTCAACCGCACTGAGACTAGCG GCTTTTCAGTGATGAGCATGTTAGTGCGGTCAATGCTAACAACAAAAACG CACACATGCACGCTCCTAATCCTCTGTTGGAGCTAGCTCCCTGATACCAG CCCTCCCTTCATCGTCCCCCCCACCCCCCCGATAGATGGATTGAAGGCTA GAAAACATTTTTTGCGCCACATTTGGCGAAGCAAGAAGGAACGATTAACC ATCGGTTATCGGTCCCTTGGGAACAATGCTCCGTCCTCTCGAGGACCCGT GGCGAATAGTCTAACAACTACGGCATGTAAAACCTGCCCCCCCTCCCCCC CCCCCCCCCCCCCCCCCCCCTCCCTCCCGTGCCCCCCCCTCCGCGCGCCC TTTTTGTTGTGCCNNNNNNNNNNTCCGCCCGATGCGCCGCCACATAGCCT TCGATGCGCACACGCCTGCACGTCGGCAGCTGGCCATCCCCCCCCCCCCC CCCCCCCCCCCCCCCCCCGACGCTTTGCCGAACAGGTGCCCGATATCGAG GAGCTTGTGTCGCTGGCCAAGAAGCACGAGTTTTGCCCGTACTACCTTGG TAGGGGACACGCACCGCGGGCGGAGCTGGTGTTGATGCCGTACAACTATC TTCTCGACCCGGGAGCACGACGAGGCATAAAGGTGCTCTCTGCTTGCAGC TGCTCTTGTCGTTGGTTGGTGGTGATTGGCAGTTTTGCGCCGCCTAGGGA ATTTCGTATGGATAATCAGGGAAGTTTGTGTAAACAATCTTGCGTTTTGT GCACGGAAACCATGCTCTTTTGACTCGACTCTGAACGGGATCCAGGCGAG ATCTTGCAAGCGCGGTTTCAGGAACTTGGCGAACGCCTGTCGTTGGTGAG GGCTGTCTTGGTAGTATTAATAGTAGCAATTTGTTGCCGCTGTCGCTCTG CGTGTTTGACGCTGCTACAAGTATTGCTGGTTGTGTGGTGGTAGCTTTTG ATGCGGTGTTGTTGTCCTGTCCATTTTTGTCGTCATCCTTGTCGTTGGCA ACGTCGGCGTCCTCGCGATGTTGACACCGCTTATAATCGGCGAATGTGTT TTTCGTGTTTTTTTTTGGACGCCCTGTGCGCTCTCCCTCGGTCCCTCTCA CGGGGATACGGATCGTCTGTCTGTCTTCTGTCTGTCTGTCTGTCTGTCTC TCTGTCTCTCTGTTTCTCTGTCTCTCTGTCTCTCTGTCTTTCTGTCTCTC TGTCTTTTTGTCTCTCTGTCTTTCTGTCTCTCTGTCTCTCTGTCTGTCTG TCTCTCTGTCTGTCTGTCTGTCTGTCTTTCTGTCTCTCTGTCTCTCTGTC TGTCTGTCTGTCTGTCTGTCTGTCTCTCTGTCTGTCTGTCTTTCTGTCTT TCTGTCTCTCTGTCTCTCTGTCTCTCTCTCTGTCTGTCTGTCTCTCTGTC TGTCTGTCTGTCTGTCTTTCTGTCTGTCTTTCTGTCTTTCTGTCTCTCTG TCTCTCTGTCTCTCTCTCTGACTGTCTGTCTCTCTGTCTGTCTGTCTGTC TGTCTTTCTGTCTCTCTATCTGTCTGTCTGTCTCTCTGTCTCTCTGTCTG CCTGCTTTGTTGTCGCGCTTAGATCAACTGGAGCAACGCGGTGGTCATAT TCGACGAGGCTCATAACCTGGAGAGCGTGGCGAGCGATGCCTCCAGCTTC GAGCTGACCAGCGCGCAGATCGCGGGCGCTCAGGATGAAGCTCTGAGGTG CCACAACCTATGCACCGAGGGGGGCGTGGATGAGGTAGGACGGGACGGGA TGGCCCGGGTATCGCCGCACAACAAAAGCGCCTTCGCGGTTGATGACCGC GGAACAGGTTCCTATGTACCACGGAACAGCTTTTTCATCGATTGTGTTTT CCGTCCTTGTTTACCTACCGGGTACATTCCATGGTTTGCATTTGTGTGTT TCTTTCTCATGCAGTAGCACCTCTTGTCACGTTGTCCCGCACGTCGTGCA CGAAATAAATCTTGGAAAAGCGAGAGATTTGGCATTGATTTTCGTGTGAA CAGAACGATCATTCAGTTTGCCGTGTTGATGCTTTACGAGGAAAGAGAGG AACCGATTCATCAATCTTTCTGGCGTTAATCTCACGATATCCACCGCGGA CGGGAGAAGTTGTGAAATGGAAAGCACCTCTTGTTTGTTTCCTCTGAAAA GCACGAAGCGCATTATAGAGAGGAATGGTTTCTTCGTCATGTTGCCATTT TTCGTCGCTGCTTCTTCGGTGCTTAAATACAAGGCACATATAATCTTAGT AGGAAATGATCATTTCTTTCGTCACGATGTCATTTTACCTCGGTGCTGCG ATGATTTTCCGCCCCGGGGTTCCGTGGGGATGACCGCAGCAAGGAGGAGG GGGGGCGACGCAGGCGGACAACGCTCTCCTCGTGAAGCAGGCGCTGCACC TACTCGAGGACGCGATGGAAGGCGTGAAACTCCCTGCCAGCGGCAAGGGT TTCACGCAGAAGGGGGAGTACGTCTACGCGCTTTTCGAGCACGCTGGGAT AACGTTCGACACGGCTCAGGCAAGGTTTGGG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10261:1058..5588+

>mRNA_Ecto-sp13_S_contig10261.280.1 ID=mRNA_Ecto-sp13_S_contig10261.280.1|Name=mRNA_Ecto-sp13_S_contig10261.280.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1017bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10261:1058..5588+ (Ectocarpus species13 EcNAP12_S_4_19m)
AAGAATGCCCTCCTGGAAAGCCCGACCGGTACCGGCAAGACGCTATGCCT
ACTCACGGCCTCTCTCGCTTGGCAACAACGGAACTCGGCCATGGTGGCCT
CCAAGCCTGCCCCTACACAGCTTGCGTACGACGAGCGACCGGTCACCGAC
CTGTCCCGCCCGCGACACGAGCAACAGCCGTACCAGGAGAACAAACCTGC
CGCAGCCGCGGCCATGCCCTCCGTCATCATCTACGCCTCGCGCACCCACA
GCCAGCTAGGCCAGGTGGCGAACGAGCTGAAGAACACGGTGTACCGCCCG
AGGCTCTCCCTCCTGGGCTCTCGCGACCAGCTCTGTGTCCACGAGGAGGT
TTCCCAGATGAAGGGAGGCGCCAAGAATCACGCCTGCTCGGCCCTCGTCA
AGGCCAGGCGTTGCAAGTACCACCGCGGGACGGAGGACATGGTGGAGCGG
GCGGGGGGGGGGGGGCGGGGTGGGGGGGGGGGGGGGGGGGGGGCCCCCTG
GCCAGAGGACGGGGGGGTGCCCGATATCGAGGAGCTTGTGTCGCTGGCCA
AGAAGCACGAGTTTTGCCCGTACTACCTTGGTAGGGGACACGCACCGCGG
GCGGAGCTGGTGTTGATGCCGTACAACTATCTTCTCGACCCGGGAGCACG
ACGAGGCATAAAGATCAACTGGAGCAACGCGGTGGTCATATTCGACGAGG
CTCATAACCTGGAGAGCGTGGCGAGCGATGCCTCCAGCTTCGAGCTGACC
AGCGCGCAGATCGCGGGCGCTCAGGATGAAGCTCTGAGGTGCCACAACCT
ATGCACCGAGGGGGGCGTGGATGAGCAAGGAGGAGGGGGGGCGACGCAGG
CGGACAACGCTCTCCTCGTGAAGCAGGCGCTGCACCTACTCGAGGACGCG
ATGGAAGGCGTGAAACTCCCTGCCAGCGGCAAGGGTTTCACGCAGAAGGG
GGAGTACGTCTACGCGCTTTTCGAGCACGCTGGGATAACGTTCGACACGG
CTCAGGCAAGGTTTGGG
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