mRNA_Ecto-sp13_S_contig1352.2800.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1352.2800.1 vs. uniprot
Match: D7G6X5_ECTSI (Separase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6X5_ECTSI) HSP 1 Score: 256 bits (655), Expect = 1.850e-75 Identity = 128/136 (94.12%), Postives = 129/136 (94.85%), Query Frame = 1
Query: 1 DVFAYSGHGAGELLVGRDTVAGLARCPVAVLMGCSSGRLKGYGDFEPMGMATSYLAGGSPAVVANLWDVTDKDIDRFSVALFDAFVGKAEASDGGRGKPAKTLAHAVAQSRAECKMPFIIGYAPVCYGIPMTAAPS 408
DVFAY GHGAGELLVGRDTVAGLARCPVAVLMGCSSGRLKG GDFEPMGMATSYLAGGSPAVVANLWDVTDKDIDRFSVAL +AFVGK ASDGGRGKPA TLAHAVA SRAECKMPFIIGYAPVCYGIPMTAAPS
Sbjct: 2187 DVFAYCGHGAGELLVGRDTVAGLARCPVAVLMGCSSGRLKGDGDFEPMGMATSYLAGGSPAVVANLWDVTDKDIDRFSVALLEAFVGKGGASDGGRGKPASTLAHAVAHSRAECKMPFIIGYAPVCYGIPMTAAPS 2322
BLAST of mRNA_Ecto-sp13_S_contig1352.2800.1 vs. uniprot
Match: A0A835YY68_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY68_9STRA) HSP 1 Score: 129 bits (324), Expect = 2.220e-35 Identity = 66/103 (64.08%), Postives = 76/103 (73.79%), Query Frame = 1
Query: 94 MGCSSGRLKGYGDFEPMGMATSYLAGGSPAVVANLWDVTDKDIDRFSVALFDAFVGKAEASDGGRGKPAKTLAHAVAQSRAECKMPFIIGYAPVCYGIPMTAA 402
MGCSSGRL+G G+FEPMGM ++YL GSPAVVANLWDVTD+DIDR+ +A+ DAFV P TLAH VA+ R CKM IIGYAPVCYGIP+ AA
Sbjct: 1 MGCSSGRLRGGGEFEPMGMVSAYLVAGSPAVVANLWDVTDRDIDRYCLAVLDAFV----VGXXXXXXP-PTLAHVVAEGRQVCKMRHIIGYAPVCYGIPLAAA 98
BLAST of mRNA_Ecto-sp13_S_contig1352.2800.1 vs. uniprot
Match: A0A836BSX4_9CHLO (Separase n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A836BSX4_9CHLO) HSP 1 Score: 140 bits (353), Expect = 6.770e-35 Identity = 74/143 (51.75%), Postives = 98/143 (68.53%), Query Frame = 1
Query: 1 DVFAYSGHGAGELLVGRDTVAGLARCPVAVLMGCSSGRLKGYGDFEPMGMATSYLAGGSPAVVANLWDVTDKDIDRFSVALFDAFVG-------KAEASDGGRGKPAKTLAHAVAQSRAECKMPFIIGYAPVCYGIPMTAAPS 408
D+F Y GHG+GE + + L RC + +LMGCSSGRL+ +G ++P G A +YL GSPAVVANLWDVTD+DIDR++ AL +++G AEA++ GRG A L AVA SRA CK+P +IG APVCYG+P+ + S
Sbjct: 1884 DLFLYFGHGSGEQFLPLPALRRLPRCALGLLMGCSSGRLRLHGAYDPAGAAAAYLVAGSPAVVANLWDVTDRDIDRYAAALMRSWLGCRGEAGSGAEAAEEGRGMVA--LGRAVACSRAACKLPHLIGAAPVCYGVPVRSLAS 2024
BLAST of mRNA_Ecto-sp13_S_contig1352.2800.1 vs. uniprot
Match: A0A4P9XK54_9FUNG (Separase (Fragment) n=1 Tax=Thamnocephalis sphaerospora TaxID=78915 RepID=A0A4P9XK54_9FUNG) HSP 1 Score: 127 bits (319), Expect = 3.770e-32 Identity = 74/145 (51.03%), Postives = 88/145 (60.69%), Query Frame = 1
Query: 1 DVFAYSGHGAGELLVGRDTVAGLARCPVAVLMGCSSGRLKGYGDFEPMGMATSYLAGGSPAVVANLWDVTDKDIDRFSVALFDAFVGKAEASDGGRGKPAK--------TLAHAVAQSRAECKMPFIIGYAPVCYGIP-MTAAPS 408
D Y GHG E + V L RC V +LMGCSSG L G+FEP G A +YL G PAVVANLWDVTDKDIDRFS+A+ D + G AS G R + +LA AVA SR C +P+++G APV YG+P MT PS
Sbjct: 168 DTVLYFGHGGAEQYIRGGAVRKLDRCAVTLLMGCSSGHLAPAGEFEPTGTALNYLMAGCPAVVANLWDVTDKDIDRFSLAMLDRW-GLLPASAGVRTSATRCATRGTLPSLASAVAASRDACTLPYLVGAAPVVYGLPHMTMLPS 311
BLAST of mRNA_Ecto-sp13_S_contig1352.2800.1 vs. uniprot
Match: A0A8J4ERQ1_9CHLO (Separase n=2 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4ERQ1_9CHLO) HSP 1 Score: 132 bits (332), Expect = 4.470e-32 Identity = 73/149 (48.99%), Postives = 93/149 (62.42%), Query Frame = 1
Query: 1 DVFAYSGHGAGELLVGRDTVAGLARCPVAVLMGCSSGRLKGYGDFEPMGMATSYLAGGSPAVVANLWDVTDKDIDRFSVALFDAFVGKAEA-------SDGGRGKPAKT------------LAHAVAQSRAECKMPFIIGYAPVCYGIP 390
++F Y GHG+GE + R + L RC +LMGCSSGRL+ +G ++P G A +YL G PA+VANLWDVTD+DIDRFS AL A++G EA S GG AK L AVA SR+ CK+P++IG APVCYG+P
Sbjct: 2175 ELFLYFGHGSGEQFLPRPALRKLQRCASCLLMGCSSGRLRLHGAYDPTGAAVAYLLAGCPALVANLWDVTDRDIDRFSQALMHAWLGCTEAMPITSSTSCGGASTIAKPERPCMVRGNCEPLGLAVAHSRSACKLPYLIGAAPVCYGLP 2323
BLAST of mRNA_Ecto-sp13_S_contig1352.2800.1 vs. uniprot
Match: A0A397J5Q4_9GLOM (Separase n=1 Tax=Diversispora epigaea TaxID=1348612 RepID=A0A397J5Q4_9GLOM) HSP 1 Score: 130 bits (328), Expect = 1.540e-31 Identity = 68/130 (52.31%), Postives = 86/130 (66.15%), Query Frame = 1
Query: 1 DVFAYSGHGAGELLVGRDTVAGLARCPVAVLMGCSSGRLKGYGDFEPMGMATSYLAGGSPAVVANLWDVTDKDIDRFSVALFDAFVGKAEASDGGRGKPAKTLAHAVAQSRAECKMPFIIGYAPVCYGIP 390
D++ Y GHG+GE + + L RC V +L+GCSSG LK G+F+P G A SY+ G PA+VANLWDVTDKDIDRFS ALF + S GRG +L AV++SR EC + ++IG APV YGIP
Sbjct: 2214 DLYIYFGHGSGEQYIRNHHIRSLDRCAVTLLLGCSSGHLKNGGEFDPSGAALSYMIAGCPALVANLWDVTDKDIDRFSKALFKNWELNPNESKKGRGI---SLVQAVSKSRNECVLKYLIGSAPVVYGIP 2340
BLAST of mRNA_Ecto-sp13_S_contig1352.2800.1 vs. uniprot
Match: A0A3R7A461_9STRA (Separase n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R7A461_9STRA) HSP 1 Score: 130 bits (326), Expect = 2.630e-31 Identity = 68/135 (50.37%), Postives = 86/135 (63.70%), Query Frame = 1
Query: 1 DVFAYSGHGAGELLVGRDTVAGLARCPVAVLMGCSSGRLKGYGDFEPMGMATSYLAGGSPAVVANLWDVTDKDIDRFSVALFDAFVGKAEASDGGRGKPAKTLAHAVAQSRAECKMPFIIGYAPVCYGIPMTAAP 405
DVF Y GHG+GE +GR V L +CPVA+LMGCSS RL +G +EP GM SYL SPAVV LWDVTD+D+DR S+AL + + +AS L A+A +R ECK+P + G A VCYG+P+ P
Sbjct: 931 DVFLYCGHGSGERYIGRQVVEHLTKCPVALLMGCSSARLTPFGLYEPEGMLASYLEAKSPAVVGMLWDVTDRDLDRLSLALLETWFNT-DAS----------LCQALANARDECKLPCLNGLAAVCYGLPVVVKP 1054
BLAST of mRNA_Ecto-sp13_S_contig1352.2800.1 vs. uniprot
Match: A0A024TSE1_9STRA (Separase n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TSE1_9STRA) HSP 1 Score: 130 bits (326), Expect = 2.730e-31 Identity = 68/135 (50.37%), Postives = 86/135 (63.70%), Query Frame = 1
Query: 1 DVFAYSGHGAGELLVGRDTVAGLARCPVAVLMGCSSGRLKGYGDFEPMGMATSYLAGGSPAVVANLWDVTDKDIDRFSVALFDAFVGKAEASDGGRGKPAKTLAHAVAQSRAECKMPFIIGYAPVCYGIPMTAAP 405
DVF Y GHG+GE +GR V L +CPVA+LMGCSS RL +G +EP GM SYL SPAVV LWDVTD+D+DR S+AL + + +AS L A+A +R ECK+P + G A VCYG+P+ P
Sbjct: 1276 DVFLYCGHGSGERYIGRQVVEHLTKCPVALLMGCSSARLTPFGLYEPEGMLASYLEAKSPAVVGMLWDVTDRDLDRLSLALLETWFNT-DAS----------LCQALANARDECKLPCLNGLAAVCYGLPVVVKP 1399
BLAST of mRNA_Ecto-sp13_S_contig1352.2800.1 vs. uniprot
Match: A0A8J4FYI1_9CHLO (Separase n=4 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4FYI1_9CHLO) HSP 1 Score: 130 bits (326), Expect = 2.850e-31 Identity = 71/151 (47.02%), Postives = 91/151 (60.26%), Query Frame = 1
Query: 1 DVFAYSGHGAGELLVGRDTVAGLARCPVAVLMGCSSGRLKGYGDFEPMGMATSYLAGGSPAVVANLWDVTDKDIDRFSVALFDAFVGKAEASDGGRG----------KPAKT---------LAHAVAQSRAECKMPFIIGYAPVCYGIPMT 396
D+F Y GHG+GE + R + L RC +LMGCSSGRL+ +G ++P G A +YL G PA+VANLWDVTD+DIDRFS AL A++G A KP + L AVA SR+ CK+P++IG APVCYG+P T
Sbjct: 2175 DLFLYFGHGSGEQFLPRPALRKLQRCASCLLMGCSSGRLRLHGAYDPTGAAVAYLLAGCPALVANLWDVTDRDIDRFSQALMHAWLGCTGAMPAASSTICGSAPTVAKPERPCTVRGICEPLGLAVAHSRSACKLPYLIGAAPVCYGLPST 2325
BLAST of mRNA_Ecto-sp13_S_contig1352.2800.1 vs. uniprot
Match: A0A7S1SS90_9CHLO (Separase n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1SS90_9CHLO) HSP 1 Score: 125 bits (315), Expect = 4.750e-31 Identity = 63/130 (48.46%), Postives = 85/130 (65.38%), Query Frame = 1
Query: 1 DVFAYSGHGAGELLVGRDTVAGLARCPVAVLMGCSSGRLKGYGDFEPMGMATSYLAGGSPAVVANLWDVTDKDIDRFSVALFDAFVGKAEASDGGRGKPAKTLAHAVAQSRAECKMPFIIGYAPVCYGIP 390
D+F Y GHGAGE + + + L C A+LMGCSSGRL+ GD+E G+ +YL G PA VANLWDVTD+DIDRFS AL D + ++ + DG + L +++ R C++PF+ G APVC+GIP
Sbjct: 245 DLFIYFGHGAGEKYLPQSALRKLNSCAAALLMGCSSGRLRHCGDYEATGVVLAYLIAGCPAAVANLWDVTDRDIDRFSQALLDCWT-QSSSRDGNGAE----LVGTISKGRQSCRLPFLTGAAPVCFGIP 369 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1352.2800.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1352.2800.1 >prot_Ecto-sp13_S_contig1352.2800.1 ID=prot_Ecto-sp13_S_contig1352.2800.1|Name=mRNA_Ecto-sp13_S_contig1352.2800.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=106bp MGCSSGRLKGYGDFEPMGMATSYLAGGSPAVVANLWDVTDKDIDRFSVALback to top mRNA from alignment at Ecto-sp13_S_contig1352:9635..10245+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1352.2800.1 ID=mRNA_Ecto-sp13_S_contig1352.2800.1|Name=mRNA_Ecto-sp13_S_contig1352.2800.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=611bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1352:9635..10245+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1352:9635..10245+ >mRNA_Ecto-sp13_S_contig1352.2800.1 ID=mRNA_Ecto-sp13_S_contig1352.2800.1|Name=mRNA_Ecto-sp13_S_contig1352.2800.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=318bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1352:9635..10245+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |