mRNA_Ecto-sp13_S_contig13507.2791.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig13507.2791.1 vs. uniprot
Match: D8LH12_ECTSI (Zn-dependent peptidase (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH12_ECTSI) HSP 1 Score: 332 bits (851), Expect = 1.210e-113 Identity = 176/193 (91.19%), Postives = 179/193 (92.75%), Query Frame = 1
Query: 1 MMETGTSEMDRVQLSRRIGSQTGGVYATFLADQPSAGGAVADPGALKQYLFLRGKVVADKVPDMLSIMFDVMTDANLDSQQRVVEMLKESKARLASSIQGSGHSFANTRLEARYTVDGYVGELQGGVTYVNTVKDMLDEAENDWPKMLKRLQRVRATLLSKKQFLSVLDGSSEAVSEFLSRLPEETEGAATNT 579
MMETGTSEMDRVQLSRRIGSQTGGVYATFLADQPSAGGAVADPGALKQYLFLRGK V+DKV A+LDSQQRVVEMLKESKARLASSIQGSGHSFANTRLEARYTVDGY+GELQGGVTYVNTVKDMLDEAENDWPKMLKRLQRVRATLLSKKQFLSVLDGSSEAVSEFLSRLPEETEGAATNT
Sbjct: 1 MMETGTSEMDRVQLSRRIGSQTGGVYATFLADQPSAGGAVADPGALKQYLFLRGKAVSDKVXXXXXXXXXXXXXAHLDSQQRVVEMLKESKARLASSIQGSGHSFANTRLEARYTVDGYLGELQGGVTYVNTVKDMLDEAENDWPKMLKRLQRVRATLLSKKQFLSVLDGSSEAVSEFLSRLPEETEGAATNT 193
BLAST of mRNA_Ecto-sp13_S_contig13507.2791.1 vs. uniprot
Match: A0A6H5LB25_9PHAE (M16C_associated domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LB25_9PHAE) HSP 1 Score: 355 bits (912), Expect = 3.610e-113 Identity = 188/200 (94.00%), Postives = 191/200 (95.50%), Query Frame = 1
Query: 1 MMETGTSEMDRVQLSRRIGSQTGGVYATFLADQPSAGGAVADPGALKQYLFLRGKVVADKVPDMLSIMFDVMTDANLDSQQRVVEMLKESKARLASSIQGSGHSFANTRLEARYTVDGYVGELQGGVTYVNTVKDMLDEAENDWPKMLKRLQRVRATLLSKKQFL-------SVLDGSSEAVSEFLSRLPEETEGAATNT 579
MMETGTS+MDRVQLSRRIGSQTGG+YATFLADQPSAGGAVADPGALKQYLFLRGK VADKVPDMLSIMFDVMTDANLDSQQRVVEMLKESKARLASSIQGSGHSFANTRLEARYTVDGY+GELQGGVTYVNTVKDMLDEAENDWPKMLKRLQRVRATLLSKKQFL SVLDGSSEAVSEFLSRLPEETEGA TNT
Sbjct: 669 MMETGTSKMDRVQLSRRIGSQTGGIYATFLADQPSAGGAVADPGALKQYLFLRGKAVADKVPDMLSIMFDVMTDANLDSQQRVVEMLKESKARLASSIQGSGHSFANTRLEARYTVDGYLGELQGGVTYVNTVKDMLDEAENDWPKMLKRLQRVRATLLSKKQFLVNLTGDKSVLDGSSEAVSEFLSRLPEETEGAVTNT 868
BLAST of mRNA_Ecto-sp13_S_contig13507.2791.1 vs. uniprot
Match: A0A835YY54_9STRA (Metalloenzyme, LuxS/M16 peptidase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY54_9STRA) HSP 1 Score: 186 bits (471), Expect = 6.000e-51 Identity = 94/200 (47.00%), Postives = 141/200 (70.50%), Query Frame = 1
Query: 1 MMETGTSEMDRVQLSRRIGSQTGGVYATFLAD-QPSAGGAVADPGALKQYLFLRGKVVADKVPDMLSIMFDVMTDANLDSQQRVVEMLKESKARLASSIQGSGHSFANTRLEARYTVDGYVGELQGGVTYVNTVKDMLDEAENDWPKMLKRLQRVRATLLSKKQFL-------SVLDGSSEAVSEFLSRLPEETEGAATN 576
++ETG MDRV+L+R IG+QTGGVY T L + GG +A + YLFLRGK V+ K P++L I+ V+T+A LDSQQR +E+LKE+KARL +SI GSGHS+A+ R+E+RYT++GY+ E+ GG++ V TVK +L AE+DWP +L RL+++RA+++++ L VLD ++ A+S F++ +P EG ++
Sbjct: 658 LLETGAGSMDRVELTRHIGTQTGGVYCTSLTGTKMGGGGVIASSDDVVGYLFLRGKAVSAKTPELLDIVRTVVTEARLDSQQRAIEILKETKARLDASIVGSGHSYASMRIESRYTLEGYLNEISGGISSVETVKSVLKMAEDDWPALLARLEKIRASIVTRNNLLINLTGDQEVLDAAAPAISNFINSIPGAGEGVVSH 857
BLAST of mRNA_Ecto-sp13_S_contig13507.2791.1 vs. uniprot
Match: A0A7S2V8U1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V8U1_9STRA) HSP 1 Score: 171 bits (433), Expect = 7.930e-46 Identity = 85/191 (44.50%), Postives = 129/191 (67.54%), Query Frame = 1
Query: 1 MMETGTSEMDRVQLSRRIGSQTGGVYATFLADQP-SAGGAVADPGALKQYLFLRGKVVADKVPDMLSIMFDVMTDANLDSQQRVVEMLKESKARLASSIQGSGHSFANTRLEARYTVDGYVGELQGGVTYVNTVKDMLDEAENDWPKMLKRLQRVRATLLSKKQFL-------SVLDGSSEAVSEFLSRLP 549
+ + GTSE+DRV L R+IG+ TGG+ A+F DQ ++GG V+DP + +LF+RGK V K+ + ++ D++ DA LD+QQRV+E+LK+S A SS+ SGHSFA +RL+ARYT Y+ E+ GG++Y+ T+K + ++AE DWP +L RL+ +R LLSK L VLD + E ++ F+ ++P
Sbjct: 664 LKDVGTSELDRVALDRKIGTHTGGISASFSVDQGYTSGGKVSDPSDVNGHLFVRGKCVVSKIDMLFGLVNDILADAELDNQQRVLELLKQSMAGYQSSVLSSGHSFAASRLDARYTTSDYIDEMTGGISYIETLKTLTEQAEKDWPSLLARLEGIRDKLLSKAGMLINLTADQEVLDAAKEPMASFIGKVP 854
BLAST of mRNA_Ecto-sp13_S_contig13507.2791.1 vs. uniprot
Match: A0A7S2RFS8_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RFS8_9STRA) HSP 1 Score: 165 bits (417), Expect = 1.150e-43 Identity = 90/205 (43.90%), Postives = 129/205 (62.93%), Query Frame = 1
Query: 1 MMETGTSEMDRVQLSRRIGSQTGG----VYATFLADQPSAGGAVADPGALKQYLFLRGKVVADKVPDMLSIMFDVMTDANLDSQQRVVEMLKESKARLASSIQGSGHSFANTRLEARYTVDGYVGELQGGVTYVNTVKDMLDEAENDWPKMLKRLQRVRATLLSKK-----QFL------SVLDGSSEAVSEFLSRLPEETEGAA 570
M + G E+ ++LSR+IG+ TGG ++ T + + G V+D + L L+GK DK+ ++ SI ++T ANLDSQ++V+EMLKESK+ L S IQGSGHSFANTR+ +RYT GY+ E G+TY+N+VK ML+EAE DWP L RL+++R T+L + FL +V+DG V FL LP + +G+A
Sbjct: 686 MKDNGAGELSDIELSRKIGTHTGGAGVGLFTTTIRSETEEEGTVSDGNHMLTKLTLQGKATTDKIDELFSIFSLMLTKANLDSQKKVIEMLKESKSGLESGIQGSGHSFANTRMSSRYTPAGYIDEKMSGITYLNSVKIMLEEAEKDWPTFLARLEKMRDTILDNETCRNGMFLDITGEKAVMDGIQSNVESFLENLPGDAKGSA 890
BLAST of mRNA_Ecto-sp13_S_contig13507.2791.1 vs. uniprot
Match: A0A835ZGW9_9STRA (Metalloenzyme, LuxS/M16 peptidase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGW9_9STRA) HSP 1 Score: 163 bits (413), Expect = 3.830e-43 Identity = 87/192 (45.31%), Postives = 127/192 (66.15%), Query Frame = 1
Query: 1 MMETGTSEMDRVQLSRRIGSQTGGVY-ATFLADQPSAGGAVADPGALKQYLFLRGKVVADKVPDMLSIMFDVMTDANLDSQQRVVEMLKESKARLASSIQGSGHSFANTRLEARYTVDGYVGELQGGVTYVNTVKDMLDEAENDWPKMLKRLQRVRATLLSKKQFL-------SVLDGSSEAVSEFLSRLPE 552
++E+G DRV+LSR I + TGGVY +T + A GAVA P + YLFLRGK V+ K P++LSI+ V+ +A LDSQQR VE+LKE KARL +S+ GSGHSFA TR+++R+ ++ Y+ E+ GG++ + TVK L AE DWP +L RL+ +RA + + + VLD + + V +F++ +PE
Sbjct: 593 LLESGAGARDRVELSRHINTHTGGVYCSTVTGTRAGANGAVAAPDDVVGYLFLRGKAVSAKTPELLSIIRSVVREARLDSQQRAVEILKEMKARLEASVVGSGHSFAATRIDSRHALEPYLNEIGGGLSSLATVKANLAAAEEDWPALLARLEELRAAIFKRDNLIINLTGDQGVLDAAEQPVRDFIASMPE 784
BLAST of mRNA_Ecto-sp13_S_contig13507.2791.1 vs. uniprot
Match: A0A7S4MIS0_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MIS0_9STRA) HSP 1 Score: 162 bits (409), Expect = 1.370e-42 Identity = 86/198 (43.43%), Postives = 128/198 (64.65%), Query Frame = 1
Query: 1 MMETGTSEMDRVQLSRRIGSQTGGVYATFLA----DQPSAGGAVADPGALKQYLFLRGKVVADKVPDMLSIMFDVMTDANLDSQQRVVEMLKESKARLASSIQGSGHSFANTRLEARYTVDGYVGELQGGVTYVNTVKDMLDEAENDWPKMLKRLQRVRATLLSKKQFLS-----------VLDGSSEAVSEFLSRLP 549
++ETG ++ VQLSRR+G TGG+ A+ L ++ A +D + LFLRGK ADK ++ S+ ++TDANLDS +++VE+L+E+K R+ SS+Q +GHS+ANTRL +RYT GY+GE GG+TY++TVK++LD AENDWP +L RL+ +R+ LL + + V++ + V FLS LP
Sbjct: 705 LLETGAGDLSDVQLSRRMGIHTGGISASTLMVPVFEEGQDESAASDGTKMITKLFLRGKSTADKAGELFSLYNLILTDANLDSPKKIVEILRETKTRMESSVQSAGHSYANTRLASRYTPSGYIGEKMGGITYLDTVKELLDAAENDWPSVLARLEGIRSALLKQTKCRDGMILDITGDKRVMETIAPEVESFLSNLP 902
BLAST of mRNA_Ecto-sp13_S_contig13507.2791.1 vs. uniprot
Match: A0A7R9U9I1_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U9I1_9STRA) HSP 1 Score: 157 bits (398), Expect = 6.230e-42 Identity = 84/179 (46.93%), Postives = 118/179 (65.92%), Query Frame = 1
Query: 1 MMETGTSEMDRVQLSRRIGSQTGGVYATFLAD---QPSAGGAVADPGALKQYLFLRGKVVADKVPDMLSIMFDVMTDANLDSQQRVVEMLKESKARLASSIQGSGHSFANTRLEARYTVDGYVGELQGGVTYVNTVKDMLDEAENDWPKMLKRLQRVRATLLSKKQFLSVLDGSSEAVS 528
++E GT++ D L+RRIG TGGV + L D P G + + YLFLRGK V DKV ++ +IM D++TD NLD Q RV+EML+E+KA + SSI SGH+FA +RL A T G + E GGVTY+NTV+++L++AEN+WP +L RLQ+++ TLL+ + L G E +S
Sbjct: 168 LLECGTNKEDETTLTRRIGRHTGGVRSAILRDLVEHPE--GKCVEGDEIVHYLFLRGKAVPDKVSELFAIMKDILTDVNLDRQSRVIEMLRETKASMESSIVTSGHAFAASRLAAHDTGFGVLREQTGGVTYLNTVRELLEQAENEWPSLLSRLQKIQETLLNSNTLVVNLTGDKEVLS 344
BLAST of mRNA_Ecto-sp13_S_contig13507.2791.1 vs. uniprot
Match: A0A7S4BMQ4_CHRCT (Hypothetical protein (Fragment) n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BMQ4_CHRCT) HSP 1 Score: 158 bits (400), Expect = 2.170e-41 Identity = 86/191 (45.03%), Postives = 128/191 (67.02%), Query Frame = 1
Query: 1 MMETGTSEMDRVQLSRRIGSQTGGVYATFLADQP-SAGGAVADPGALKQYLFLRGKVVADKVPDMLSIMFDVMTDANLDSQQRVVEMLKESKARLASSIQGSGHSFANTRLEARYTVDGYVGELQGGVTYVNTVKDMLDEAENDWPKMLKRLQRVRATLLSKKQFLSVLDGSSEA-------VSEFLSRLP 549
++ETGTS MD V L RRIG++TGGV AT + QP +A G+V+DP A L +R K +DK ML ++ +V++DA LD+Q +VVE+LKESK+++ S SG+++A RL +R ++ GY+ E GVTY T+K MLD A+NDWP +L+RL ++R+T+LS+ + L +A V EF+++LP
Sbjct: 677 LLETGTSSMDAVTLQRRIGARTGGVEATIFSQQPVTADGSVSDPLAAVHKLMVRAKATSDKASAMLDLVHEVLSDAKLDTQSKVVEILKESKSQMESRFISSGNAYAAMRLSSRNSLLGYIQESCSGVTYYETLKQMLDTAQNDWPSLLERLTKLRSTVLSQNGLVINLTADPDALAKSRPVVDEFVAKLP 867
BLAST of mRNA_Ecto-sp13_S_contig13507.2791.1 vs. uniprot
Match: A0A7R9U8K2_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U8K2_9STRA) HSP 1 Score: 157 bits (398), Expect = 4.090e-41 Identity = 84/179 (46.93%), Postives = 118/179 (65.92%), Query Frame = 1
Query: 1 MMETGTSEMDRVQLSRRIGSQTGGVYATFLAD---QPSAGGAVADPGALKQYLFLRGKVVADKVPDMLSIMFDVMTDANLDSQQRVVEMLKESKARLASSIQGSGHSFANTRLEARYTVDGYVGELQGGVTYVNTVKDMLDEAENDWPKMLKRLQRVRATLLSKKQFLSVLDGSSEAVS 528
++E GT++ D L+RRIG TGGV + L D P G + + YLFLRGK V DKV ++ +IM D++TD NLD Q RV+EML+E+KA + SSI SGH+FA +RL A T G + E GGVTY+NTV+++L++AEN+WP +L RLQ+++ TLL+ + L G E +S
Sbjct: 687 LLECGTNKEDETTLTRRIGRHTGGVRSAILRDLVEHPE--GKCVEGDEIVHYLFLRGKAVPDKVSELFAIMKDILTDVNLDRQSRVIEMLRETKASMESSIVTSGHAFAASRLAAHDTGFGVLREQTGGVTYLNTVRELLEQAENEWPSLLSRLQKIQETLLNSNTLVVNLTGDKEVLS 863 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13507.2791.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig13507.2791.1 >prot_Ecto-sp13_S_contig13507.2791.1 ID=prot_Ecto-sp13_S_contig13507.2791.1|Name=mRNA_Ecto-sp13_S_contig13507.2791.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=193bp MMETGTSEMDRVQLSRRIGSQTGGVYATFLADQPSAGGAVADPGALKQYLback to top mRNA from alignment at Ecto-sp13_S_contig13507:1818..4706+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig13507.2791.1 ID=mRNA_Ecto-sp13_S_contig13507.2791.1|Name=mRNA_Ecto-sp13_S_contig13507.2791.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2889bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13507:1818..4706+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig13507:1818..4706+ >mRNA_Ecto-sp13_S_contig13507.2791.1 ID=mRNA_Ecto-sp13_S_contig13507.2791.1|Name=mRNA_Ecto-sp13_S_contig13507.2791.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=579bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13507:1818..4706+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |