mRNA_Ecto-sp13_S_contig135.2787.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig135.2787.1
Unique NamemRNA_Ecto-sp13_S_contig135.2787.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig135.2787.1 vs. uniprot
Match: D7G6E1_ECTSI (NFACT-R_1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6E1_ECTSI)

HSP 1 Score: 383 bits (983), Expect = 1.250e-133
Identity = 214/215 (99.53%), Postives = 214/215 (99.53%), Query Frame = 1 
Query:    1 MVFYFTSSDGHMLYMGKDKYENEDLIRYGFPEDVWFHVDNLSSAHVYLRMNRGEKLKELDPALLVECCTLVKANSIEGCKRKEVNVVYTRWQNLEKKASYEAGQVGYKDESRVFKCRVEKTNAIVNALNRTKREERPNLAELQEERAKEHRREQKALRKKKXXXXXXXXXXXXXXXXLRSYDTLFEESKMASNADVAATEDASASIAFEDDFMVR 645
            MVFYFTSSDGHMLYMGKDKYENEDLIRYGFPEDVWFHVDNLSSAHVYLRMNRGEKLKELDPALLVECCTLVKANSIEGCKRKEVNVVYTRWQNLEKKASYEAGQVGYKDESRVFKCRVEKTNAIVNALNRTKREE PNLAELQEERAKEHRREQKALRKKKXXXXXXXXXXXXXXXXLRSYDTLFEESKMASNADVAATEDASASIAFEDDFMVR
Sbjct:    1 MVFYFTSSDGHMLYMGKDKYENEDLIRYGFPEDVWFHVDNLSSAHVYLRMNRGEKLKELDPALLVECCTLVKANSIEGCKRKEVNVVYTRWQNLEKKASYEAGQVGYKDESRVFKCRVEKTNAIVNALNRTKREEHPNLAELQEERAKEHRREQKALRKKKXXXXXXXXXXXXXXXXLRSYDTLFEESKMASNADVAATEDASASIAFEDDFMVR 215
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BLAST of mRNA_Ecto-sp13_S_contig135.2787.1 vs. uniprot
Match: A0A835Z4I1_9STRA (NFACT-R_1 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4I1_9STRA)

HSP 1 Score: 276 bits (706), Expect = 1.580e-91
Identity = 142/216 (65.74%), Postives = 170/216 (78.70%), Query Frame = 1 
Query:    4 VFYFTSSDGHMLYMGKDKYENEDLIRYGFPEDVWFHVDNLSSAHVYLRMNRGEKLKELDPALLVECCTLVKANSIEGCKRKEVNVVYTRWQNLEKKASYEAGQVGYKDESRVFKCRVEKTNAIVNALNRTKREERPNLAELQEERAKEHRREQKALRKKKXXXXXXXXXXXXXXXXLRSYDTLFEESKMASNADVA----ATEDASASIAFEDDFM 639
            +++FT+S GH LYMGKDKYENEDLIRYG PEDVWFHVDNLSSAHVYLRMN+GEKLKE+ P +++ECC LVKANSIEGCK+K+V VVYTRW NL K  S EAGQVG+KDES+V K RVEK NAIVNALNR+K E  P+L  LQEERA E RREQKA+RK++                +RSYD+LF+E KMA + +V+    A+ED S+++AFEDDFM
Sbjct:    1 MYFFTASSGHTLYMGKDKYENEDLIRYGLPEDVWFHVDNLSSAHVYLRMNKGEKLKEVLPEVIMECCQLVKANSIEGCKKKDVEVVYTRWMNLRKSNSMEAGQVGFKDESKVHKVRVEKNNAIVNALNRSKTEASPDLQALQEERAAEIRREQKAVRKQQEQAEKIARRQAEEDKRMRSYDSLFDEGKMAGSTNVSNPYGASEDQSSAVAFEDDFM 216
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BLAST of mRNA_Ecto-sp13_S_contig135.2787.1 vs. uniprot
Match: A0A6H5KW36_9PHAE (NFACT-R_1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW36_9PHAE)

HSP 1 Score: 273 bits (699), Expect = 3.130e-91
Identity = 161/164 (98.17%), Postives = 161/164 (98.17%), Query Frame = 1 
Query:  148 MNRGEKLKELDPALLVECCTLVKANSIEGCKRKEVNVVYTRWQNLEKKASYEAGQVGYKDESRVFKCRVEKTNAIVNALNRTKREERPNLAELQEERAKEHRREQKALRKKKXXXXXXXXXXXXXXXXLRSYDTLFEESKMASNADVAATEDASASIAFEDDFM 639
            MNRGEKLKELDPALLVECCTLVKANSIEGCKRKEVNVVYTRWQNLEKKASYEAGQVGYKDESRVFKCRVEKTNAIVNALNRTKREE PNLAELQEERAKEHRREQKALRKKK XXXXXXXXXXXXXX LRSYDTLFEESKMASNADVAATEDASASIAFEDDFM
Sbjct:    1 MNRGEKLKELDPALLVECCTLVKANSIEGCKRKEVNVVYTRWQNLEKKASYEAGQVGYKDESRVFKCRVEKTNAIVNALNRTKREEHPNLAELQEERAKEHRREQKALRKKKEXXXXXXXXXXXXXXRLRSYDTLFEESKMASNADVAATEDASASIAFEDDFM 164
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BLAST of mRNA_Ecto-sp13_S_contig135.2787.1 vs. uniprot
Match: B8C9M3_THAPS (NFACT-R_1 domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C9M3_THAPS)

HSP 1 Score: 198 bits (503), Expect = 1.210e-60
Identity = 111/221 (50.23%), Postives = 140/221 (63.35%), Query Frame = 1 
Query:    1 MVFYFTSSDG-HMLYMGKDKYENEDLIRYGFPEDVWFHVDNLSSAHVYLRMNRGEKLKELDPALLVECCTLVKANSIEGCKRKEVNVVYTRWQNLEKKAS-------YEAGQVGYKDESRVFKCRVEKTNAIVNALNRTKREERPNLAELQEERAKEHRREQKALRKKKXXXXXXXXXXXXXXXXLRSYDTLFEESKMASNADVAATEDASASIAFEDDFM 639
            MV+YFT+  G + +YMGKDKYENEDLI+YG PED WFHVD+LSSAHVYLR+  G  L ++    L +CC LVKANSI+GCK+  V VVYTRW+NL+K +S          GQVG+     V +  +EK N IVN LN+TK E+ PNLA+ Q++R KE + E K  RK                   RSYD +  E  M SNA+  AT D++A+  FEDDFM
Sbjct:    1 MVYYFTTRCGNYTIYMGKDKYENEDLIKYGHPEDCWFHVDDLSSAHVYLRLKPGMTLDDIPEDCLTDCCALVKANSIQGCKKSSVYVVYTRWKNLKKASSTCQDTSDMVDGQVGFHRPDNVRRTNIEKNNPIVNQLNKTKEEKHPNLAKQQQDRMKEIQTELKEKRKADDKAKRLEELERARIKEERSYDRIMGEHNMTSNAERNATADSTAAEEFEDDFM 221
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BLAST of mRNA_Ecto-sp13_S_contig135.2787.1 vs. uniprot
Match: A0A6U6DJ37_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6DJ37_9STRA)

HSP 1 Score: 195 bits (496), Expect = 1.120e-59
Identity = 121/214 (56.54%), Postives = 154/214 (71.96%), Query Frame = 1 
Query:    1 MVFYFTSSDGH-MLYMGKDKYENEDLIRYGFPEDVWFHVDNLSSAHVYLRMNRGEKLKELDPALLVECCTLVKANSIEGCKRKEVNVVYTRWQNLEKKASYEAGQVGYKDESRVFKCRVEKTNAIVNALNRTKREERPNLAELQEERAKEHRREQKALRKKKXXXXXXXXXXXXXXXXLRSYDTLFEESKMASNADVAATEDASASIAFEDDFM 639
            MVFYF++  G+ MLYMGKDKYENEDLI++G PEDVWFHVD+LSSAHVYLRM  G  L ++ P  ++EC  LVKANSI+GCK K V VVYTRW+NL+K +    GQVG+     V +  VEK N IVNALN+TK E  P+L + Q++R +E + E+KA     XXXXXXXXXXXXXX    SY+ + ++  M SNA+  AT DA+A+  +E+DF 
Sbjct:    1 MVFYFSTRCGNFMLYMGKDKYENEDLIKFGQPEDVWFHVDDLSSAHVYLRMKPGMTLSDIPPDAILECAALVKANSIQGCKMKSVYVVYTRWKNLKKTSQMVDGQVGFHRPENVKRMEVEKHNPIVNALNKTKEERHPDLYKEQQDRLREIQEEKKANXXXXXXXXXXXXXXXXXXKERLSYNRIMKDDNMTSNAERTATADATAAEEYEEDFF 214
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BLAST of mRNA_Ecto-sp13_S_contig135.2787.1 vs. uniprot
Match: K0TEU7_THAOC (NFACT-R_1 domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TEU7_THAOC)

HSP 1 Score: 194 bits (494), Expect = 2.250e-59
Identity = 109/214 (50.93%), Postives = 148/214 (69.16%), Query Frame = 1 
Query:    1 MVFYFTSSDG-HMLYMGKDKYENEDLIRYGFPEDVWFHVDNLSSAHVYLRMNRGEKLKELDPALLVECCTLVKANSIEGCKRKEVNVVYTRWQNLEKKASYEAGQVGYKDESRVFKCRVEKTNAIVNALNRTKREERPNLAELQEERAKEHRREQKALRKKKXXXXXXXXXXXXXXXXLRSYDTLFEESKMASNADVAATEDASASIAFEDDFM 639
            MV+YFTS  G + +YMGKDK+ENE LI+YG PEDVWFHVD+LSSAHVYLR+  G+ L ++    L++CC+L KANSI+GCK+  V +VYTRW+NL+K +    GQVGY   + V + + EK N +V  L +TK+E  P+LA+ Q  R +E +  +KA  + +      XXXXXX     RSY+ +F + KM SNAD+ AT D SA++ +EDDFM
Sbjct:    1 MVYYFTSRCGAYTIYMGKDKHENETLIKYGLPEDVWFHVDDLSSAHVYLRLKPGQTLDDIPEEALIDCCSLCKANSIQGCKKSTVYIVYTRWKNLKKTSGMVDGQVGYHRPNNVRRRQTEKNNPVVRQLEKTKKELFPDLAQEQAARMREIQELKKAHMRAEAKAKKLXXXXXXRLKEERSYERIFSQDKMTSNADMNATVDDSAAVDYEDDFM 214
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BLAST of mRNA_Ecto-sp13_S_contig135.2787.1 vs. uniprot
Match: A0A2D4BG70_PYTIN (Coiled-coil domain-containing protein 25, variant 2 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BG70_PYTIN)

HSP 1 Score: 188 bits (478), Expect = 6.110e-57
Identity = 106/215 (49.30%), Postives = 138/215 (64.19%), Query Frame = 1 
Query:    1 MVFYFTSSDGHMLYMGKDKYENEDLIRYGFPEDVWFHVDNLSSAHVYLRMNRGEK-LKELDPALLVECCTLVKANSIEGCKRKEVNVVYTRWQNLEKKASYEAGQVGYKDESRVFKCRVEKTNA-IVNALNRTKREERPNLAELQEERAKEHRREQKALRKKKXXXXXXXXXXXXXXXXLRSYDTLFEESKMASNADVAATEDASASIAFEDDFM 639
            MVFYFTSS+GH +YMGKDK+ENEDLIRYGF ED+WFHVD+LSSAHVYLR+  G+  L ++    L EC  LVK NSIEGCK+K V V+YT+W+NL+K  S E GQVG+    RV    VE+ N  I+ ALN++K E  P+L E + +R   ++ E+K  R++                 LRSY TL     + S   V A+ D S+  A+E+DFM
Sbjct:    1 MVFYFTSSEGHTIYMGKDKFENEDLIRYGFLEDIWFHVDDLSSAHVYLRLPIGKSALDDISETCLEECAQLVKENSIEGCKKKSVKVIYTKWRNLKKTPSMEVGQVGFNHPERVRTYVVEEKNKDILKALNKSKVESYPDLEEERRQRELLYKAERKKQRQQIELQERKAREEFKKQKELRSYSTLLTRDNIESGEKVVASADLSSVNAYEEDFM 215
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BLAST of mRNA_Ecto-sp13_S_contig135.2787.1 vs. uniprot
Match: A0A4D9D3G1_9STRA (NFACT-R_1 domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D3G1_9STRA)

HSP 1 Score: 185 bits (469), Expect = 3.200e-56
Identity = 109/168 (64.88%), Postives = 131/168 (77.98%), Query Frame = 1 
Query:   43 MGKDKYENEDLIRYGFPEDVWFHVDNLSSAHVYLRMNRGEKLKELDPALLVECCTLVKANSIEGCKRKEVNVVYTRWQNLEKKASYEAGQVGYKDESRVFKCRVEKTNAIVNALNRTKREERPNLAELQEERAKEHRREQKALRKKKXXXXXXXXXXXXXXXXLRSYD 546
            MGKDKYENE+LIR+G PEDVWFHVD LSSAHVYLR   G+KL ++   LL+EC +LVKANSIEGCK KEV VVYTRW+NL+K  S EAGQ+G+ D S+V   +V+K N+IVNALN+TK E  P+L   QE RA E+R  QKA ++ + XXXXXXXXXXXX   LRSY+
Sbjct:    1 MGKDKYENEELIRFGLPEDVWFHVDELSSAHVYLRQKPGQKLDDISSDLLLECSSLVKANSIEGCKMKEVKVVYTRWRNLKKTKSMEAGQIGFHDPSKVRTIKVQKCNSIVNALNKTKEERFPDLQAEQEARAVEYRAAQKASKRDQEXXXXXXXXXXXXEAKLRSYE 168
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BLAST of mRNA_Ecto-sp13_S_contig135.2787.1 vs. uniprot
Match: D0N3D3_PHYIT (NFACT-R_1 domain-containing protein n=29 Tax=Phytophthora TaxID=4783 RepID=D0N3D3_PHYIT)

HSP 1 Score: 186 bits (473), Expect = 3.490e-56
Identity = 105/215 (48.84%), Postives = 137/215 (63.72%), Query Frame = 1 
Query:    1 MVFYFTSSDGHMLYMGKDKYENEDLIRYGFPEDVWFHVDNLSSAHVYLRMNRGE-KLKELDPALLVECCTLVKANSIEGCKRKEVNVVYTRWQNLEKKASYEAGQVGYKDESRVFKCRVEKTNA-IVNALNRTKREERPNLAELQEERAKEHRREQKALRKKKXXXXXXXXXXXXXXXXLRSYDTLFEESKMASNADVAATEDASASIAFEDDFM 639
            MVFYFTSS+GH +YMGKDK+ENEDLIRYGF ED+WFHVD+LSSAHVYLR+  G+ K+ ++    L EC  LVK NSIEG K+K V+V YTRW+NL+K  S E GQVG+    RV   +VE+ N  I+ +LN+TK+E  P+L E   +R   ++ E+K  R +                 LRSY TL     + S   + A  D S+  A+E+DFM
Sbjct:    1 MVFYFTSSEGHTIYMGKDKFENEDLIRYGFMEDIWFHVDDLSSAHVYLRLPLGQTKVDDVSETCLEECAQLVKENSIEGSKKKSVSVCYTRWRNLKKTPSMEIGQVGFNHPERVRHYKVEEKNKDIIKSLNKTKQEFHPDLEEEHRQRELLYKAERKKQRLQLEAEQRKAKMEFKQQKDLRSYSTLMSRDNIESGDKLDAAADLSSVNAYEEDFM 215
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BLAST of mRNA_Ecto-sp13_S_contig135.2787.1 vs. uniprot
Match: K3WKA0_GLOUD (NFACT-R_1 domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WKA0_GLOUD)

HSP 1 Score: 185 bits (469), Expect = 1.400e-55
Identity = 106/215 (49.30%), Postives = 137/215 (63.72%), Query Frame = 1 
Query:    1 MVFYFTSSDGHMLYMGKDKYENEDLIRYGFPEDVWFHVDNLSSAHVYLRMNRGEK-LKELDPALLVECCTLVKANSIEGCKRKEVNVVYTRWQNLEKKASYEAGQVGYKDESRVFKCRV-EKTNAIVNALNRTKREERPNLAELQEERAKEHRREQKALRKKKXXXXXXXXXXXXXXXXLRSYDTLFEESKMASNADVAATEDASASIAFEDDFM 639
            MVFY TSS+GH +YMGKDK+ENEDLIRYGF ED+WFHVD+LSSAHVYLR+  G+  L ++    L EC  LVK NSIEG K+K VNVVYT+W+NL+K  S E GQVG+    RV    V EK   I+ ALN+TK E+ P+L E + ++   ++ E+K  R++                 LRSY TL    K+ S   V A+ D S+   +E+DFM
Sbjct:    1 MVFYLTSSEGHTIYMGKDKFENEDLIRYGFLEDIWFHVDDLSSAHVYLRLPMGKSALDDISETCLEECAQLVKENSIEGSKKKSVNVVYTKWRNLKKTQSMEVGQVGFNHPERVRTYAVAEKNRDILKALNKTKLEKYPDLEEERRKQELLYKVERKKQRQQVEFAEKKAREEYKQQKELRSYSTLMSRDKIESANKVVASADLSSVNEYEEDFM 215
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig135.2787.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6E1_ECTSI1.250e-13399.53NFACT-R_1 domain-containing protein n=1 Tax=Ectoca... [more]
A0A835Z4I1_9STRA1.580e-9165.74NFACT-R_1 domain-containing protein n=1 Tax=Tribon... [more]
A0A6H5KW36_9PHAE3.130e-9198.17NFACT-R_1 domain-containing protein n=1 Tax=Ectoca... [more]
B8C9M3_THAPS1.210e-6050.23NFACT-R_1 domain-containing protein n=1 Tax=Thalas... [more]
A0A6U6DJ37_9STRA1.120e-5956.54Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
K0TEU7_THAOC2.250e-5950.93NFACT-R_1 domain-containing protein n=1 Tax=Thalas... [more]
A0A2D4BG70_PYTIN6.110e-5749.30Coiled-coil domain-containing protein 25, variant ... [more]
A0A4D9D3G1_9STRA3.200e-5664.88NFACT-R_1 domain-containing protein n=1 Tax=Nannoc... [more]
D0N3D3_PHYIT3.490e-5648.84NFACT-R_1 domain-containing protein n=29 Tax=Phyto... [more]
K3WKA0_GLOUD1.400e-5549.30NFACT-R_1 domain-containing protein n=1 Tax=Globis... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig135contigEcto-sp13_S_contig135:33808..37130 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score385.2
Seed ortholog evalue2e-104
Seed eggNOG ortholog2880.D7G6E1
Preferred nameCCDC25
Model size648
KEGG koko:K04989
KEGG TC1.A.5.1.2
KEGG Pathwayko04742,map04742
Hectar predicted targeting categoryother localisation
GOsGO:0001581,GO:0003008,GO:0003674,GO:0005215,GO:0005216,GO:0005261,GO:0005262,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0007600,GO:0007606,GO:0008150,GO:0008324,GO:0009268,GO:0009581,GO:0009582,GO:0009593,GO:0009605,GO:0009612,GO:0009628,GO:0009987,GO:0010447,GO:0015075,GO:0015085,GO:0015267,GO:0015318,GO:0016020,GO:0016021,GO:0022803,GO:0022838,GO:0022857,GO:0022890,GO:0030001,GO:0031224,GO:0032501,GO:0032991,GO:0034220,GO:0034702,GO:0034703,GO:0042221,GO:0043235,GO:0044424,GO:0044425,GO:0044464,GO:0046873,GO:0050877,GO:0050896,GO:0050906,GO:0050907,GO:0050909,GO:0050912,GO:0050915,GO:0050982,GO:0051179,GO:0051234,GO:0051606,GO:0051716,GO:0055085,GO:0070588,GO:0070838,GO:0071214,GO:0071467,GO:0071468,GO:0071944,GO:0072511,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0104004,GO:1902495,GO:1990351
Exons7
EggNOG free text desc.Domain of unknown function (DUF814)
EggNOG OGsKOG3272@1,KOG3272@2759
Ec32 ortholog descriptionDomain of unknown function DUF814
Ec32 orthologEc-10_001520.1
Cds size648
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04040
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig135.2787.1prot_Ecto-sp13_S_contig135.2787.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig135 33808..37130 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462721.224317-CDS-Ecto-sp13_S_contig135:33807..339391681462721.224317-CDS-Ecto-sp13_S_contig135:33807..33939Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig135 33808..33939 -
1681462721.2388296-CDS-Ecto-sp13_S_contig135:34339..344001681462721.2388296-CDS-Ecto-sp13_S_contig135:34339..34400Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig135 34340..34400 -
1681462721.2517989-CDS-Ecto-sp13_S_contig135:34775..349181681462721.2517989-CDS-Ecto-sp13_S_contig135:34775..34918Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig135 34776..34918 -
1681462721.2688918-CDS-Ecto-sp13_S_contig135:35379..354751681462721.2688918-CDS-Ecto-sp13_S_contig135:35379..35475Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig135 35380..35475 -
1681462721.2787929-CDS-Ecto-sp13_S_contig135:35779..358301681462721.2787929-CDS-Ecto-sp13_S_contig135:35779..35830Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig135 35780..35830 -
1681462721.2875967-CDS-Ecto-sp13_S_contig135:36107..362471681462721.2875967-CDS-Ecto-sp13_S_contig135:36107..36247Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig135 36108..36247 -
1681462721.2960649-CDS-Ecto-sp13_S_contig135:37105..371301681462721.2960649-CDS-Ecto-sp13_S_contig135:37105..37130Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig135 37106..37130 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig135.2787.1

>prot_Ecto-sp13_S_contig135.2787.1 ID=prot_Ecto-sp13_S_contig135.2787.1|Name=mRNA_Ecto-sp13_S_contig135.2787.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=216bp
MVFYFTSSDGHMLYMGKDKYENEDLIRYGFPEDVWFHVDNLSSAHVYLRM
NRGEKLKELDPALLVECCTLVKANSIEGCKRKEVNVVYTRWQNLEKKASY
EAGQVGYKDESRVFKCRVEKTNAIVNALNRTKREERPNLAELQEERAKEH
RREQKALRKKKELEEKNARKQKEEEKRLRSYDTLFEESKMASNADVAATE
DASASIAFEDDFMVR*
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mRNA from alignment at Ecto-sp13_S_contig135:33808..37130-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig135.2787.1 ID=mRNA_Ecto-sp13_S_contig135.2787.1|Name=mRNA_Ecto-sp13_S_contig135.2787.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3323bp|location=Sequence derived from alignment at Ecto-sp13_S_contig135:33808..37130- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGTCTTCTACTTTACGTCAAGTGGTGAGAGGGGTCAAGGACAATCAAT
TTCTCCGGCAACAGACTAGCCCGCAAGACACACCGCAAGCTCAGCTTTGC
GTATGTACGCACAGCTGCCACGCTGGGGTCTGTGTTGGTGTATGTACGAC
AGCCAAATCATGGCATTTCATCCTTTGGTACAGCTGATACAACTGAGATA
CTACGCCTGATCTCGATGCCTAAAAGGTGCTGAGAGCTACTGCACCTACA
GAAGCTGATTGCACTTCAGCACGTTCCCGCAGGTGCCACAGGTGCCGGAC
GTTGGTGAATGCCAGCAGGTTTTACCAGCCAGTAGGACAGCTCGTAAACA
GACTACATATCCATTTGGTCGCGTAGGATGCCCCACACATGAGTGAGGTG
GTTCTATCGGCCTACTACTGACTACTGACGGAAGACATTCTTCACGTCAG
CTCCCTGTCGGATCGCCCGTTTGAAGAGGAAGGCCTAGTCCTGAGCCGTC
GTTCTTTCCGCTCTACTCAAATATGTTATTCCGTGTTTCGAACGCGGCCC
AGGAACAATCCATTCTACAATACAGATGCGGGAAGTGCCGAAGAGTCTGC
CGCGCTGTTATTGTTGTTGGCTATAGGTGTAGTACCGCCGAGGTTGATAT
GTTGATCATGTCCTGGGGATTCAACAACCAGCTTTCGAGTGCTACTGGGT
AATCAATACCGCAGAGCTTCGTTTCGTACTTCGAAGTATGTACTCAACTT
GTACGCTAAAACACCTCTCATGGCCCACGTTATGTATGTAGCGATGATAC
TTGTCACCGAGAGTGATTCTGAATAGTCAGTCCGAGATTTCCTAATTTCA
AATTGCTTCGTCGTTCTCCTTCTGCTTTCCCAGACGGGCATATGCTGTAC
ATGGGCAAAGACAAGTACGAGAACGAGGACTTAATCCGGTACGGTTTTCC
AGAAGATGTCTGGTTTCACGTCGACAACTTGAGCTCCGCCCACGTCTACC
TCCGAATGAATCGGGGAGAGAAGGTTCGGACGATTGAGGGGGGGTGCGCC
AATGGCCTTTGAAGAGCGATCGCGAGTAGCACCAGGACCAGAGGCGGATA
AATTTGGAGAATGGGATTTTTCGGGGCGGAAAGTTCAGCCCGGTGTAGAA
ACAGAGAGGATGGACGGTCGACAAGTAGTCTTGCCCGACTTGTGTGATGG
ACCAGAACAGTGGACCCTGCGTGGATTTGAGTTGTTGTTGCGAGAGAGGG
GTGACACAATTCCTTCCGTCTTCCTTTCTTCGTCCGCGTTCTTTGTGCAG
CTAAAAGAGCTCGATCCTGCGCTGCTTGTGGAATGCTGCACTCTCGTCAA
GGTAAGCGAGCTTTCTTCTATCGCCGCGCTTGCATGGGCACGTTTTCCTT
CACGTCAATCGCTCCCAACCACCCTTTTTCGTGTCGTACGGCGAGCCATA
TGCATATCTCCTCGAGCCATTGCATGCCTCCTCTTACTACTGCTCTGACA
TGCCGCGAACGTAACGGTAGCAGGCTATGTTACATCCTATTCAGGAATAT
TTTTACTTGGGTCCACGCAGGTGGGGTAAGCAGTCAGTGGTTCGATCGGT
TACCACGTGCATATGAAACTTACATCGAAGACGGCGATCGCGTGCTGTTC
TTCAGGCAAACTCGATCGAAGGGTGCAAGCGGAAGGAAGTCAACGTTGTC
TACACTCGGTGGCAAAACCTTGAGAAAAAGGCTAGCTATGAGGCGGGACA
GGTGCGAAAACCAGCACGTGCTTCGACATAGAACTGTGTTGTCACTCGGT
ACGAACGACGAACACGCGGGTGAACACGACCAACAAGATTTCGCCAACAT
GTTTCCAAGAGATGAGGCGTGAGAATGAACGCGTATCAGAGATCTATTGA
AAGCGTGCTGCTTCACCTACGCTCGATCCTTGATTTGTTCAGATGTGGTT
TTGGTGGGTGGGGAATATCAACCTTCCCTGTCGGGGGCTGCCGTAAAACT
CTCCCAGATAGAATAGCGCGAGAAACATTATCGAAATGACATGCACTCCG
TCTCGTGCTCTGTGTGACCCAATCAGCGAACTCCATTCATCCGCATCAAC
TTTTTGATAGGACTTGAGAGAGATGTGAGGTAAATCAGGCAGGCCCTTTC
CCTTCGGTACGACGTGTTTATAACACTTTACTTCTTAATGCTTGTCTTTT
GGCGGCGCTCAGGTGGGCTACAAGGACGAGAGCAGGGTGTTCAAGTGTCG
GGTGGAGAAGACCAACGCTATCGTTAACGCTCTGAACCGCACCAAACGCG
AGGAGCGTCCGAATCTCGCCGAGTTGCAGGAGGAACGGGCGAAGGAACAC
CGGAGGTGAGAATTGTGAAGGCCATCTACGCAGTAATGACATTCCTGAAC
AACACTTGGCCGAACGCAGCTCATGTGAAGGTTGGGAACGAGGGAGAGAT
CACGTGGAAACCATCAACCTTGTTTGTTTGGGATGAAGGGCTGGTACTAG
GTGGGAACGTGGCGGATGGTTTATAGGCACAGGGACAAGGAGGCGGGGGC
TCTTATTGTCAGCGCCGAACTACGCAGTCTTATATGGCATCCAATGTGTG
TTTTGTTCTGTTATGCCCGATGACGCGAATGGATAACGCGGCATCAATCC
TAAGAAATTGACCGTTTTCTTTGGGCGCGTGCGGCCATGCACCTGCCCGG
CCTTTCCCTCGCGGCGAAAAATTTCGACAGAGAGCAGAAAGCCTTGAGAA
AGAAGAAAGAACTCGAAGAGAAGAATGCTCGGAAGCAGAAGGTATGTCGA
TCGTATTCGACGCGACAAATTTTGTTTTATTTCTACTGTGGAAAGGGTGT
CGCTCCTGTTCCTGTTATATGCTGACATGGTGCTCTCCGGTCGATGCCAA
AGGACGAGACCGTTCTCGAGACACAGCATAGAAGGCAGCGTTGATTCTCT
GAAGTGAAATATTGCTGACCGACACTGTTGACCAGAGGTGGCGCCGATTG
ACTGCCTTTCCGCCACCTTGTGAACAGGCTGTTCACCTTTCCCGTATCTC
CTCTTACCCTTCGCCCTTGCCTGATTCCGTATGTACTGTACGTCACATCC
CCGTGTGCGCGCTGTCTCGTCATATTTCACGGCTCGGGTGGCGAACGAAC
CATGTTCACAATACTTGATGCCCGTGGTGAAACAACGGCAGGAGGAGGAG
AAACGACTGCGATCATACGACACGTTGTTTGAGGAGTCTAAGATGGCGTC
CAACGCCGATGTTGCTGCCACAGAAGACGCGTCCGCTTCAATCGCTTTCG
AGGACGACTTCATGGTGAGATAA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig135:33808..37130-

>mRNA_Ecto-sp13_S_contig135.2787.1 ID=mRNA_Ecto-sp13_S_contig135.2787.1|Name=mRNA_Ecto-sp13_S_contig135.2787.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=648bp|location=Sequence derived from alignment at Ecto-sp13_S_contig135:33808..37130- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGTCTTCTACTTTACGTCAAGTGACGGGCATATGCTGTACATGGGCAA
AGACAAGTACGAGAACGAGGACTTAATCCGGTACGGTTTTCCAGAAGATG
TCTGGTTTCACGTCGACAACTTGAGCTCCGCCCACGTCTACCTCCGAATG
AATCGGGGAGAGAAGCTAAAAGAGCTCGATCCTGCGCTGCTTGTGGAATG
CTGCACTCTCGTCAAGGCAAACTCGATCGAAGGGTGCAAGCGGAAGGAAG
TCAACGTTGTCTACACTCGGTGGCAAAACCTTGAGAAAAAGGCTAGCTAT
GAGGCGGGACAGGTGGGCTACAAGGACGAGAGCAGGGTGTTCAAGTGTCG
GGTGGAGAAGACCAACGCTATCGTTAACGCTCTGAACCGCACCAAACGCG
AGGAGCGTCCGAATCTCGCCGAGTTGCAGGAGGAACGGGCGAAGGAACAC
CGGAGAGAGCAGAAAGCCTTGAGAAAGAAGAAAGAACTCGAAGAGAAGAA
TGCTCGGAAGCAGAAGGAGGAGGAGAAACGACTGCGATCATACGACACGT
TGTTTGAGGAGTCTAAGATGGCGTCCAACGCCGATGTTGCTGCCACAGAA
GACGCGTCCGCTTCAATCGCTTTCGAGGACGACTTCATGGTGAGATAA
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