prot_Ecto-sp13_S_contig13492.2779.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13492.2779.1
Unique Nameprot_Ecto-sp13_S_contig13492.2779.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length270
Homology
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BLAST of mRNA_Ecto-sp13_S_contig13492.2779.1 vs. uniprot
Match: D8LTY9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTY9_ECTSI)

HSP 1 Score: 456 bits (1173), Expect = 6.850e-161
Identity = 247/269 (91.82%), Postives = 252/269 (93.68%), Query Frame = 0 
Query:    1 MTSGPRRHAPSLDSDRLWPVDKRPNAASGGGDDSSPRDVASMKAEIAELQAGTTASLDRAIAAAQATASVGARTQVTLKEQREQMGEIDAEARAIDGTLKRTGHNLKYGLTWRGALTAPFRRKKPPAPQAGGGGITGGDISPVFKDDFRQSTPPGGAPAHDGSTTSTPSPKKGGRLKFGSPRKKAGAARAEEIGTKAASKLPENVPEGFETQLDTLDSLLNGLTVQAKEIGAELRQQNEGIEVLGERVEPLRQETASQAKQIKRRFGVK 269
            M SGPRRH PS DSDRLWPVDK+PNAAS GGDDSSPRDVASMKAEIAELQAGTTASLDRAIAAA+ATASVGARTQVTLKEQREQMGEIDAEARAIDGTLKRTGHNLKYGLTWRGALTAPFRRK           ITGGDISPVFKDDFRQSTPPGGAPAH GST+STPSPKKGGRLKFGSPRKKAGAARAEEIGTKAASKLPENVPEGFETQLDTLDSLL+GLTVQAKEIGAEL+QQNEGIEVLGERVEPLRQETA QAKQIKRRFGVK
Sbjct:    1 MASGPRRHTPSSDSDRLWPVDKQPNAASRGGDDSSPRDVASMKAEIAELQAGTTASLDRAIAAAEATASVGARTQVTLKEQREQMGEIDAEARAIDGTLKRTGHNLKYGLTWRGALTAPFRRKXXXXXXXXXXXITGGDISPVFKDDFRQSTPPGGAPAHGGSTSSTPSPKKGGRLKFGSPRKKAGAARAEEIGTKAASKLPENVPEGFETQLDTLDSLLDGLTVQAKEIGAELKQQNEGIEVLGERVEPLRQETAFQAKQIKRRFGVK 269
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13492.2779.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LTY9_ECTSI6.850e-16191.82Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.5.110coord: 199..267
e-value: 5.4E-6
score: 28.3
NoneNo IPR availableGENE3D1.20.5.110coord: 33..109
e-value: 1.3E-11
score: 46.4
NoneNo IPR availablePANTHERPTHR19305SYNAPTOSOMAL ASSOCIATED PROTEINcoord: 37..264
NoneNo IPR availableSUPERFAMILY58038SNARE fusion complexcoord: 38..107

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13492contigEcto-sp13_S_contig13492:751..1560 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13492.2779.1mRNA_Ecto-sp13_S_contig13492.2779.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13492 751..1560 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13492.2779.1 ID=prot_Ecto-sp13_S_contig13492.2779.1|Name=mRNA_Ecto-sp13_S_contig13492.2779.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=270bp
MTSGPRRHAPSLDSDRLWPVDKRPNAASGGGDDSSPRDVASMKAEIAELQ
AGTTASLDRAIAAAQATASVGARTQVTLKEQREQMGEIDAEARAIDGTLK
RTGHNLKYGLTWRGALTAPFRRKKPPAPQAGGGGITGGDISPVFKDDFRQ
STPPGGAPAHDGSTTSTPSPKKGGRLKFGSPRKKAGAARAEEIGTKAASK
LPENVPEGFETQLDTLDSLLNGLTVQAKEIGAELRQQNEGIEVLGERVEP
LRQETASQAKQIKRRFGVK*
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