prot_Ecto-sp13_S_contig13486.2776.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13486.2776.1
Unique Nameprot_Ecto-sp13_S_contig13486.2776.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length103
Homology
BLAST of mRNA_Ecto-sp13_S_contig13486.2776.1 vs. uniprot
Match: D7FTS9_ECTSI (Endonuclease III homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTS9_ECTSI)

HSP 1 Score: 228 bits (580), Expect = 2.570e-73
Identity = 101/102 (99.02%), Postives = 101/102 (99.02%), Query Frame = 0
Query:    1 MDVAWGRNEGICVDTHVHRISNRLGWVDTWNRNRPKAQNPEKTRKHLQGWLPREHWSEVNELLVGFGQQVCFATSPSCSACGISGLCPSADRHGDLALPPSK 102
            MDVAWGRNEGICVDTHVHRISNRLGWVDTWNRNRPKAQNPEKTRKHLQGWLPREHWSEVNELLVGFGQQVCFAT PSCSACGISGLCPSADRHGDLALPPSK
Sbjct:  188 MDVAWGRNEGICVDTHVHRISNRLGWVDTWNRNRPKAQNPEKTRKHLQGWLPREHWSEVNELLVGFGQQVCFATRPSCSACGISGLCPSADRHGDLALPPSK 289          
BLAST of mRNA_Ecto-sp13_S_contig13486.2776.1 vs. uniprot
Match: K3WGK0_GLOUD (ENDO3c domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WGK0_GLOUD)

HSP 1 Score: 143 bits (361), Expect = 9.060e-42
Identity = 61/92 (66.30%), Postives = 72/92 (78.26%), Query Frame = 0
Query:    1 MDVAWGRNEGICVDTHVHRISNRLGWVDTWNRNRPKAQNPEKTRKHLQGWLPREHWSEVNELLVGFGQQVCFATSPSCSACGISGLCPSADR 92
            M+ AW    GICVDTHVHRISNRLGWVDTWN   PKAQ P+KTR+ LQ WLP+EHW ++N LLVG GQ+VCF+ +P CS C +S LCPSA +
Sbjct:   67 MNCAWKNVVGICVDTHVHRISNRLGWVDTWNTKNPKAQGPQKTRQELQDWLPQEHWGQLNLLLVGLGQKVCFSRNPKCSECRLSHLCPSATK 158          
BLAST of mRNA_Ecto-sp13_S_contig13486.2776.1 vs. uniprot
Match: A0A7S2V6M2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V6M2_9STRA)

HSP 1 Score: 142 bits (357), Expect = 1.160e-41
Identity = 58/90 (64.44%), Postives = 73/90 (81.11%), Query Frame = 0
Query:    1 MDVAWGRNEGICVDTHVHRISNRLGWVDTWNRNRPKAQNPEKTRKHLQGWLPREHWSEVNELLVGFGQQVCFATSPSCSACGISGLCPSA 90
            MD+AW +  GICVDTHVHR+SNRLGWV+TWN  +P++QNPEKTRK L+ WLPR+ W ++N LLVG+GQ VC A +P+CS+C I   CPSA
Sbjct:   26 MDIAWDQTVGICVDTHVHRLSNRLGWVETWNHKKPRSQNPEKTRKALEKWLPRDSWGQINPLLVGYGQSVCKAINPACSSCCIQQQCPSA 115          
BLAST of mRNA_Ecto-sp13_S_contig13486.2776.1 vs. uniprot
Match: F0X2C6_9STRA (Endonuclease III homolog n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0X2C6_9STRA)

HSP 1 Score: 145 bits (366), Expect = 1.130e-40
Identity = 58/93 (62.37%), Postives = 70/93 (75.27%), Query Frame = 0
Query:    1 MDVAWGRNEGICVDTHVHRISNRLGWVDTWNRNRPKAQNPEKTRKHLQGWLPREHWSEVNELLVGFGQQVCFATSPSCSACGISGLCPSADRH 93
            M+VAW +  GICVDTHVHRI NRLGWV TWN+  PKAQ+PEKTRK L+ WLP EHW  +N+LLVGFGQ +C A  P C  C +  +CPSA ++
Sbjct:  224 MNVAWNKPVGICVDTHVHRICNRLGWVSTWNKKNPKAQDPEKTRKELEAWLPSEHWDSINQLLVGFGQTICHARQPKCKDCALQSICPSASKN 316          
BLAST of mRNA_Ecto-sp13_S_contig13486.2776.1 vs. uniprot
Match: K3WGH9_GLOUD (Endonuclease III homolog n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WGH9_GLOUD)

HSP 1 Score: 143 bits (361), Expect = 3.010e-40
Identity = 61/92 (66.30%), Postives = 71/92 (77.17%), Query Frame = 0
Query:    1 MDVAWGRNEGICVDTHVHRISNRLGWVDTWNRNRPKAQNPEKTRKHLQGWLPREHWSEVNELLVGFGQQVCFATSPSCSACGISGLCPSADR 92
            MD AW    GICVDTHVHRISNRLGWV+TWN+  PKAQ+PEKTR  LQ WLP+EHW  +N LLVGFGQ +C   +P C+ C IS LCPSA++
Sbjct:  194 MDCAWNNVVGICVDTHVHRISNRLGWVNTWNKKNPKAQDPEKTRAELQDWLPQEHWGPINVLLVGFGQTICQPRNPKCTECKISHLCPSANK 285          
BLAST of mRNA_Ecto-sp13_S_contig13486.2776.1 vs. uniprot
Match: A0A5D6Y8M4_9STRA (Endonuclease III homolog n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y8M4_9STRA)

HSP 1 Score: 144 bits (363), Expect = 3.550e-40
Identity = 62/92 (67.39%), Postives = 69/92 (75.00%), Query Frame = 0
Query:    1 MDVAWGRNEGICVDTHVHRISNRLGWVDTWNRNRPKAQNPEKTRKHLQGWLPREHWSEVNELLVGFGQQVCFATSPSCSACGISGLCPSADR 92
            MD AW    GICVDTHVHRISNRLGWV TWN+  PKAQ+PEKTR+ LQ WLPREHW  +N LLVGFGQ +C   +P C  C I+ LCPSA R
Sbjct:  230 MDCAWSNVAGICVDTHVHRISNRLGWVTTWNKKNPKAQDPEKTRRELQDWLPREHWGPLNLLLVGFGQTICQPRAPKCDECSITHLCPSAHR 321          
BLAST of mRNA_Ecto-sp13_S_contig13486.2776.1 vs. uniprot
Match: H3G4Y0_PHYRM (Endonuclease III homolog n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G4Y0_PHYRM)

HSP 1 Score: 141 bits (355), Expect = 8.230e-40
Identity = 59/90 (65.56%), Postives = 67/90 (74.44%), Query Frame = 0
Query:    1 MDVAWGRNEGICVDTHVHRISNRLGWVDTWNRNRPKAQNPEKTRKHLQGWLPREHWSEVNELLVGFGQQVCFATSPSCSACGISGLCPSA 90
            M+ AW    GICVDTHVHRISNRL WV TWN+N PK+QNPEKTR  L+ WLP+EHW  +N LLVGFGQ +C    P CS C I G+CPSA
Sbjct:  157 MNCAWNNAVGICVDTHVHRISNRLKWVKTWNKNNPKSQNPEKTRAELEDWLPKEHWGPINPLLVGFGQTICLPRGPKCSECKIRGVCPSA 246          
BLAST of mRNA_Ecto-sp13_S_contig13486.2776.1 vs. uniprot
Match: A0A6A3KHN9_9STRA (Endonuclease III homolog n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3KHN9_9STRA)

HSP 1 Score: 140 bits (352), Expect = 1.330e-38
Identity = 57/91 (62.64%), Postives = 68/91 (74.73%), Query Frame = 0
Query:    1 MDVAWGRNEGICVDTHVHRISNRLGWVDTWNRNRPKAQNPEKTRKHLQGWLPREHWSEVNELLVGFGQQVCFATSPSCSACGISGLCPSAD 91
            ++ AW    GICVDTHVHRISNRL WV TWN+N PK+QNPEKTR  L+ WLP+EHW  +N LLVGFGQ +C    P C+ C I G+CPSA+
Sbjct:  223 LNCAWNNTVGICVDTHVHRISNRLKWVKTWNKNNPKSQNPEKTRAELEDWLPKEHWGPINPLLVGFGQTICLPRGPRCNECKIRGICPSAN 313          
BLAST of mRNA_Ecto-sp13_S_contig13486.2776.1 vs. uniprot
Match: A0A329RX62_9STRA (Endonuclease III homolog n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329RX62_9STRA)

HSP 1 Score: 140 bits (352), Expect = 1.330e-38
Identity = 58/91 (63.74%), Postives = 68/91 (74.73%), Query Frame = 0
Query:    1 MDVAWGRNEGICVDTHVHRISNRLGWVDTWNRNRPKAQNPEKTRKHLQGWLPREHWSEVNELLVGFGQQVCFATSPSCSACGISGLCPSAD 91
            M+ AW    GICVDTHVHRISNRL WV TWN+N PK+Q+PEKTR  L+ WLP+EHW  +N LLVGFGQ +C    P CS C I G+CPSA+
Sbjct:  223 MNCAWKNTVGICVDTHVHRISNRLKWVKTWNKNNPKSQDPEKTRAELEDWLPKEHWGPINPLLVGFGQTICLPRGPKCSECKIRGICPSAN 313          
BLAST of mRNA_Ecto-sp13_S_contig13486.2776.1 vs. uniprot
Match: A0A3F2RMS3_9STRA (Endonuclease III homolog n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RMS3_9STRA)

HSP 1 Score: 139 bits (350), Expect = 2.200e-38
Identity = 57/90 (63.33%), Postives = 67/90 (74.44%), Query Frame = 0
Query:    1 MDVAWGRNEGICVDTHVHRISNRLGWVDTWNRNRPKAQNPEKTRKHLQGWLPREHWSEVNELLVGFGQQVCFATSPSCSACGISGLCPSA 90
            M+ AW    GICVDTHVHRI+NRL WV TWN+N PK+Q+PEKTR  L+ WLP+EHW  +N LLVGFGQ +C    P CS C I G+CPSA
Sbjct:  215 MNCAWDNTVGICVDTHVHRIANRLKWVKTWNKNNPKSQDPEKTRAELEDWLPKEHWGPINPLLVGFGQTICLPRGPKCSECKIQGICPSA 304          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13486.2776.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FTS9_ECTSI2.570e-7399.02Endonuclease III homolog n=1 Tax=Ectocarpus silicu... [more]
K3WGK0_GLOUD9.060e-4266.30ENDO3c domain-containing protein n=1 Tax=Globispor... [more]
A0A7S2V6M2_9STRA1.160e-4164.44Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
F0X2C6_9STRA1.130e-4062.37Endonuclease III homolog n=1 Tax=Albugo laibachii ... [more]
K3WGH9_GLOUD3.010e-4066.30Endonuclease III homolog n=1 Tax=Globisporangium u... [more]
A0A5D6Y8M4_9STRA3.550e-4067.39Endonuclease III homolog n=1 Tax=Pythium brassicum... [more]
H3G4Y0_PHYRM8.230e-4065.56Endonuclease III homolog n=1 Tax=Phytophthora ramo... [more]
A0A6A3KHN9_9STRA1.330e-3862.64Endonuclease III homolog n=4 Tax=Phytophthora TaxI... [more]
A0A329RX62_9STRA1.330e-3863.74Endonuclease III homolog n=2 Tax=Phytophthora TaxI... [more]
A0A3F2RMS3_9STRA2.200e-3863.33Endonuclease III homolog n=2 Tax=Phytophthora kern... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023170Helix-turn-helix, base-excision DNA repair, C-terminalGENE3D1.10.1670.10coord: 1..93
e-value: 1.2E-30
score: 107.3
NoneNo IPR availablePANTHERPTHR43286FAMILY NOT NAMEDcoord: 1..92
NoneNo IPR availablePANTHERPTHR43286:SF1ENDONUCLEASE III-LIKE PROTEIN 1coord: 1..92
IPR011257DNA glycosylaseSUPERFAMILY48150DNA-glycosylasecoord: 4..92

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13486contigEcto-sp13_S_contig13486:85..2042 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13486.2776.1mRNA_Ecto-sp13_S_contig13486.2776.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13486 85..2042 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13486.2776.1 ID=prot_Ecto-sp13_S_contig13486.2776.1|Name=mRNA_Ecto-sp13_S_contig13486.2776.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=103bp
MDVAWGRNEGICVDTHVHRISNRLGWVDTWNRNRPKAQNPEKTRKHLQGW
LPREHWSEVNELLVGFGQQVCFATSPSCSACGISGLCPSADRHGDLALPP
SK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023170HTH_base_excis_C
IPR011257DNA_glycosylase