prot_Ecto-sp13_S_contig1348.2770.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1348.2770.1
Unique Nameprot_Ecto-sp13_S_contig1348.2770.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length128
Homology
BLAST of mRNA_Ecto-sp13_S_contig1348.2770.1 vs. uniprot
Match: A0A6H5JR03_9PHAE (zf-CHCC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JR03_9PHAE)

HSP 1 Score: 219 bits (558), Expect = 8.200e-72
Identity = 114/127 (89.76%), Postives = 119/127 (93.70%), Query Frame = 0
Query:    1 MAARVSAKKALGLVSGSLAPRGAAVAAVRPASVGLTTAASRPFSQVAPTTTFSKERSKSVYEHGAHRSDAEARIAKVPVVMVDGPVALCDGGGGALGHPLDYIQLGSPDGGPRACQYCGTMYQMKTH 127
            MAARVSAKKAL L++GS APRG A  AVRPAS GLTTAASRPFS++APTTTFSKERSKSVYEHGAHRSDAEARIA+VPVVMVDGPVALCDGGGGALGHPLDYIQL SPDGGPRACQYCG MYQMKTH
Sbjct:    1 MAARVSAKKALDLIAGSFAPRGGA-GAVRPASAGLTTAASRPFSRLAPTTTFSKERSKSVYEHGAHRSDAEARIAEVPVVMVDGPVALCDGGGGALGHPLDYIQLASPDGGPRACQYCGIMYQMKTH 126          
BLAST of mRNA_Ecto-sp13_S_contig1348.2770.1 vs. uniprot
Match: A0A6G0WCA7_9STRA (zf-CHCC domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WCA7_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 1.020e-22
Identity = 46/71 (64.79%), Postives = 53/71 (74.65%), Query Frame = 0
Query:   58 KSVYEH-GAHRSDAEARIAKVPVVMVDGPVALCDGGGGALGHPLDYIQLGSPDGGPRACQYCGTMYQMKTH 127
            K+ YE    HRSDAE RIAKVPVV VD  VA+CDGGGGALGHPL+YIQL +    P+ C+YCG  Y+MK H
Sbjct:   40 KTPYEDINRHRSDAELRIAKVPVVEVDTDVAVCDGGGGALGHPLEYIQLNTVSKEPQTCKYCGLRYKMKHH 110          
BLAST of mRNA_Ecto-sp13_S_contig1348.2770.1 vs. uniprot
Match: A0A4D9CSN1_9STRA (zf-CHCC domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CSN1_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 1.200e-20
Identity = 45/95 (47.37%), Postives = 60/95 (63.16%), Query Frame = 0
Query:   33 VGLTTAASRPFSQVAPTTTFSKERSKSVYEHGAHRSDAEARIAKVPVVMVDGPVALCDGGGGALGHPLDYIQLGSPDGGPRACQYCGTMYQMKTH 127
            + + +A SR    V P+++     S S Y HGAHRS+AE  +A+ PV  V G VALCDGGGGA+GHP++YIQL +       C+YCG  Y+M  H
Sbjct:   26 LAIMSAPSRRCFSVPPSSSPPSNPSNSPYTHGAHRSNAEELVAQFPVTEVHGTVALCDGGGGAMGHPIEYIQLNTVGEEVATCKYCGLQYKMAHH 120          
BLAST of mRNA_Ecto-sp13_S_contig1348.2770.1 vs. uniprot
Match: A0A662WUI1_9STRA (zf-CHCC domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WUI1_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 2.750e-20
Identity = 44/74 (59.46%), Postives = 52/74 (70.27%), Query Frame = 0
Query:   60 VYEH-------GAHRSDAEARIAKVPVVMVDGPVALCDGGGGALGHPLDYIQLGS-PDGGPRACQYCGTMYQMK 125
            +Y+H         HRSDAE RIAKVPVV V G VA+CDGGGGALGHPL+YIQL +     P+ C+YCG  Y+MK
Sbjct:   32 IYDHKTPFEDVNRHRSDAELRIAKVPVVEVAGSVAVCDGGGGALGHPLEYIQLDTVKHNTPQTCKYCGVRYKMK 105          
BLAST of mRNA_Ecto-sp13_S_contig1348.2770.1 vs. uniprot
Match: W4FPE3_9STRA (zf-CHCC domain-containing protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FPE3_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 8.930e-20
Identity = 39/62 (62.90%), Postives = 46/62 (74.19%), Query Frame = 0
Query:   66 HRSDAEARIAKVPVVMVDGPVALCDGGGGALGHPLDYIQLGSPDGGPRACQYCGTMYQMKTH 127
            HRSDAE RIA+VPVV VD  VA+CDGGGGALGHP++YI L      P+ C+YCG  Y+ K H
Sbjct:   54 HRSDAELRIAQVPVVEVDSDVAVCDGGGGALGHPVEYIALNIVSDKPQTCKYCGLRYKQKHH 115          
BLAST of mRNA_Ecto-sp13_S_contig1348.2770.1 vs. uniprot
Match: A0A024TS26_9STRA (zf-CHCC domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TS26_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 8.930e-20
Identity = 39/62 (62.90%), Postives = 46/62 (74.19%), Query Frame = 0
Query:   66 HRSDAEARIAKVPVVMVDGPVALCDGGGGALGHPLDYIQLGSPDGGPRACQYCGTMYQMKTH 127
            HRSDAE  IA+VPVV VD  VA+CDGGGGALGHPL+YI L +    P+ C+YCG  Y+ K H
Sbjct:   53 HRSDAEILIAQVPVVEVDSDVAVCDGGGGALGHPLEYIALNTVSDKPQTCKYCGLRYKQKPH 114          
BLAST of mRNA_Ecto-sp13_S_contig1348.2770.1 vs. uniprot
Match: A0A485KN93_9STRA (Aste57867_9463 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KN93_9STRA)

HSP 1 Score: 87.0 bits (214), Expect = 1.330e-19
Identity = 38/62 (61.29%), Postives = 46/62 (74.19%), Query Frame = 0
Query:   66 HRSDAEARIAKVPVVMVDGPVALCDGGGGALGHPLDYIQLGSPDGGPRACQYCGTMYQMKTH 127
            HRSDAE RIA+VPV+ VD   A+CDGGGGALGHPL+YI L      P+ C+YCG  ++MK H
Sbjct:   56 HRSDAEIRIAQVPVIEVDSDTAVCDGGGGALGHPLEYIALNIVSDEPQTCKYCGLRFKMKHH 117          
BLAST of mRNA_Ecto-sp13_S_contig1348.2770.1 vs. uniprot
Match: H3H0X0_PHYRM (zf-CHCC domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H0X0_PHYRM)

HSP 1 Score: 86.7 bits (213), Expect = 1.890e-19
Identity = 47/95 (49.47%), Postives = 59/95 (62.11%), Query Frame = 0
Query:   39 ASRPFSQVAPTTTFSKERSKSVYEH-------GAHRSDAEARIAKVPVVMVDGPVALCDGGGGALGHPLDYIQLGS-PDGGPRACQYCGTMYQMK 125
            A R  + VA T      R  ++Y+H         HRSDAE RIAKVP+V V   VA+CDGGGGALGHP++YIQL +     P+ C+YCG  Y+MK
Sbjct:   18 APRAAAAVANTLHLQSARFSTIYDHRTPFEDVNRHRSDAEQRIAKVPIVEVANSVAVCDGGGGALGHPVEYIQLDTRKHNTPQTCKYCGVRYKMK 112          
BLAST of mRNA_Ecto-sp13_S_contig1348.2770.1 vs. uniprot
Match: M4BVP6_HYAAE (zf-CHCC domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BVP6_HYAAE)

HSP 1 Score: 86.7 bits (213), Expect = 1.890e-19
Identity = 38/65 (58.46%), Postives = 49/65 (75.38%), Query Frame = 0
Query:   62 EHGAHRSDAEARIAKVPVVMVDGPVALCDGGGGALGHPLDYIQLGS-PDGGPRACQYCGTMYQMK 125
            +   HRSDAE RIAK+P+V V G +A+CDGGGGALGHP++YIQL +     P+ C+YCG  Y+MK
Sbjct:   48 DRNRHRSDAELRIAKIPIVEVAGTLAVCDGGGGALGHPVEYIQLDTHKQNSPQTCKYCGVRYRMK 112          
BLAST of mRNA_Ecto-sp13_S_contig1348.2770.1 vs. uniprot
Match: F0X2A7_9STRA (Uncharacterized protein AlNc14C931G12647 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0X2A7_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 2.900e-19
Identity = 40/61 (65.57%), Postives = 50/61 (81.97%), Query Frame = 0
Query:   66 HRSDAEARIAKVPVVMVDGPVALCDGGGGALGHPLDYIQLGSPDG-GPRACQYCGTMYQMK 125
            HRSDAE RIA+VPVV V+G +A+CDGGGGALGHPL+YIQL + +   P+ C+YCG  Y+MK
Sbjct:   55 HRSDAEIRIAQVPVVEVEGNLAVCDGGGGALGHPLEYIQLDTVERYEPQTCKYCGIRYKMK 115          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1348.2770.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JR03_9PHAE8.200e-7289.76zf-CHCC domain-containing protein n=2 Tax=Ectocarp... [more]
A0A6G0WCA7_9STRA1.020e-2264.79zf-CHCC domain-containing protein n=1 Tax=Aphanomy... [more]
A0A4D9CSN1_9STRA1.200e-2047.37zf-CHCC domain-containing protein n=2 Tax=Monodops... [more]
A0A662WUI1_9STRA2.750e-2059.46zf-CHCC domain-containing protein n=2 Tax=Nothophy... [more]
W4FPE3_9STRA8.930e-2062.90zf-CHCC domain-containing protein n=4 Tax=Aphanomy... [more]
A0A024TS26_9STRA8.930e-2062.90zf-CHCC domain-containing protein n=1 Tax=Aphanomy... [more]
A0A485KN93_9STRA1.330e-1961.29Aste57867_9463 protein n=1 Tax=Aphanomyces stellat... [more]
H3H0X0_PHYRM1.890e-1949.47zf-CHCC domain-containing protein n=1 Tax=Phytopht... [more]
M4BVP6_HYAAE1.890e-1958.46zf-CHCC domain-containing protein n=1 Tax=Hyaloper... [more]
F0X2A7_9STRA2.900e-1965.57Uncharacterized protein AlNc14C931G12647 n=1 Tax=A... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.60.260.40coord: 73..125
e-value: 2.6E-16
score: 61.1
NoneNo IPR availablePANTHERPTHR13156NADH-UBIQUINONE OXIDOREDUCTASE 13 KD-A SUBUNITcoord: 43..126
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..26
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 27..127
IPR019401Zinc finger, CHCC-typePFAMPF10276zf-CHCCcoord: 85..122
e-value: 1.2E-12
score: 47.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1348contigEcto-sp13_S_contig1348:2825..4764 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1348.2770.1mRNA_Ecto-sp13_S_contig1348.2770.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1348 2825..5663 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1348.2770.1 ID=prot_Ecto-sp13_S_contig1348.2770.1|Name=mRNA_Ecto-sp13_S_contig1348.2770.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=128bp
MAARVSAKKALGLVSGSLAPRGAAVAAVRPASVGLTTAASRPFSQVAPTT
TFSKERSKSVYEHGAHRSDAEARIAKVPVVMVDGPVALCDGGGGALGHPL
DYIQLGSPDGGPRACQYCGTMYQMKTH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019401Znf_CHCC