mRNA_Ecto-sp13_S_contig10257.277.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig10257.277.1
Unique NamemRNA_Ecto-sp13_S_contig10257.277.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig10257.277.1 vs. uniprot
Match: D7G2X5_ECTSI (Adhesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2X5_ECTSI)

HSP 1 Score: 810 bits (2091), Expect = 1.510e-280
Identity = 418/507 (82.45%), Postives = 429/507 (84.62%), Query Frame = 1
Query:   31 NGTFEAVCDGCRVACDRCSFDEQPAVPTCSDVMDHGTSTGGNVTLETLSIDPGYWRVTPSSKEILPCYNADACLGG-------------------------------------------------------------------AGERRIYVFERLGWYVPLQSVKIVVVSWQIVTQFASAANVVYPGVYQQFLDGLKVFGFDLGWLLSAGCVFDMDFHGRLLAATIGPILAVLLLAGTYAAATRVNREANEKLRIIWDKHVFVFLLLTFLVYSSVSSTLFKTFACDELENGKNYLRTDYRIECDSSKHKVFQVYAGFMILLYPLGIPVLYSILLFRDREVLKKDKDDRDNSARVKSTSELWQPYKPSVFYYEVIECGRRILLTGIVVFIYPNTAAQLAITLMMAFFFALLSEAISPYSSRWETWVNRMGHVVVAVSVYVALLLKVDVSDERADSQSVFEAVLVTVHACMILSVVVETFVVAGLWRRRLREDVPARFRRGKFLFRGGV 1350
            NGTFEAVCDGCRVACD CSFDE PAVPTCSDVMDHGTSTGG VTLETLSIDPGYWR T SSKEILPCYNADACLGG                                                                   AGERR+YV ERLGWYVPLQSVKIV+VSWQI+TQFASAANVVYPGVYQQFLDGLKVFGFDLGWL+SAGCV DM FHGRLLAATIGPI AVLLLAGTYAAATR+NREANEKLRIIWDKHVFVFLLLTFLVYSSVSSTLFKTFACDELE+GKNYLRTDYRIECDSSKHKVFQVYAGFMILLYPLGIP+LYSILLF+DREVLKKDK DRD+SARVKSTSELWQPYKPSVFYYEVIECGRRILLTGIVVFIYPNTAAQLAITLMMAFFFALLSEAISPYSSRWETWVNRMGHVVVAVS+YVALLLKVDVSDERADSQSVFEAVLVTVHACMILSVVVETFVVAGLW RRLRED+PARFRRGKFLFRGGV
Sbjct:  924 NGTFEAVCDGCRVACDGCSFDEPPAVPTCSDVMDHGTSTGGKVTLETLSIDPGYWRATSSSKEILPCYNADACLGGVTGTAGYCLESYEGPYCSICSDGYASNLGYSCSKCFSRSGGIVFAVGMAVLALFVAVVVIMYIMSGEAGERRMYVLERLGWYVPLQSVKIVIVSWQILTQFASAANVVYPGVYQQFLDGLKVFGFDLGWLMSAGCVLDMGFHGRLLAATIGPIFAVLLLAGTYAAATRINREANEKLRIIWDKHVFVFLLLTFLVYSSVSSTLFKTFACDELEDGKNYLRTDYRIECDSSKHKVFQVYAGFMILLYPLGIPMLYSILLFKDREVLKKDKADRDDSARVKSTSELWQPYKPSVFYYEVIECGRRILLTGIVVFIYPNTAAQLAITLMMAFFFALLSEAISPYSSRWETWVNRMGHVVVAVSMYVALLLKVDVSDERADSQSVFEAVLVTVHACMILSVVVETFVVAGLWTRRLREDLPARFRRGKFLFRGGV 1430          
BLAST of mRNA_Ecto-sp13_S_contig10257.277.1 vs. uniprot
Match: A0A6H5K7Z1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7Z1_9PHAE)

HSP 1 Score: 808 bits (2087), Expect = 3.390e-279
Identity = 418/509 (82.12%), Postives = 431/509 (84.68%), Query Frame = 1
Query:   25 SGNGTFEAVCDGCRVACDRCSFDEQPAVPTCSDVMDHGTSTGGNVTLETLSIDPGYWRVTPSSKEILPCYNADACLGG-------------------------------------------------------------------AGERRIYVFERLGWYVPLQSVKIVVVSWQIVTQFASAANVVYPGVYQQFLDGLKVFGFDLGWLLSAGCVFDMDFHGRLLAATIGPILAVLLLAGTYAAATRVNREANEKLRIIWDKHVFVFLLLTFLVYSSVSSTLFKTFACDELENGKNYLRTDYRIECDSSKHKVFQVYAGFMILLYPLGIPVLYSILLFRDREVLKKDKDDRDNSARVKSTSELWQPYKPSVFYYEVIECGRRILLTGIVVFIYPNTAAQLAITLMMAFFFALLSEAISPYSSRWETWVNRMGHVVVAVSVYVALLLKVDVSDERADSQSVFEAVLVTVHACMILSVVVETFVVAGLWRRRLREDVPARFRRGKFLFRGGV 1350
            SG+GTFEAVCDGCRVACD CSFDEQPAVPTCSDVMDH TS GGNVTLETL IDPGYWR T SSK+ILPCYNADACLGG                                                                   AGERRIYVFERLGWYVPLQSVKIV+VSWQIVTQFASAANVVYPGVYQQF+DGLKVFGFDLGWLLS GCV DMDFHGRLLAATIGPI AVLLLAGTYAAATR+NREANEKLRIIWDKHVFVFLLLTFLVYSSVSSTLFKTFACDELE+G NYLRTDYRIECDSSKHKVFQVYAGFMILLYPLGIPVLYSILLFRDREVLKKDK DR++SARVKSTSELWQPYKPSVFYYEVIECGRR+LLTGI+VFIYPNTAAQLAITLMMAFFFALLSEA+SPYSSRWETWVNRMGHVVVAVSVYVALLLKVDVSDERADSQSVFEAVLVTVHACMILSVVVETFVVAGLWR++LREDVPARFRRGKFLFRGGV
Sbjct:  982 SGDGTFEAVCDGCRVACDGCSFDEQPAVPTCSDVMDHSTSPGGNVTLETLLIDPGYWRATSSSKKILPCYNADACLGGVTGTAGYCLESYEGPYCSICSNGYASNLGYSCSKCFSRSGGIAFAVGLAVVAVFVAVVVIRYIMSGEAGERRIYVFERLGWYVPLQSVKIVIVSWQIVTQFASAANVVYPGVYQQFIDGLKVFGFDLGWLLSVGCVLDMDFHGRLLAATIGPIFAVLLLAGTYAAATRINREANEKLRIIWDKHVFVFLLLTFLVYSSVSSTLFKTFACDELEDG-NYLRTDYRIECDSSKHKVFQVYAGFMILLYPLGIPVLYSILLFRDREVLKKDKADRNDSARVKSTSELWQPYKPSVFYYEVIECGRRVLLTGIIVFIYPNTAAQLAITLMMAFFFALLSEAVSPYSSRWETWVNRMGHVVVAVSVYVALLLKVDVSDERADSQSVFEAVLVTVHACMILSVVVETFVVAGLWRQKLREDVPARFRRGKFLFRGGV 1489          
BLAST of mRNA_Ecto-sp13_S_contig10257.277.1 vs. uniprot
Match: D7G2Z8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Z8_ECTSI)

HSP 1 Score: 535 bits (1377), Expect = 5.530e-178
Identity = 270/503 (53.68%), Postives = 345/503 (68.59%), Query Frame = 1
Query:   40 FEAVCDGCRVACDRCSFDEQPAVPTCSDVMDHGTSTGGNVTLETLSIDPGYWRVTPSSKEILPCYNADACLGGAGERRIY-------------------------------------------------------------------VFERLGWYVPLQSVKIVVVSWQIVTQFASAANVVYPGVYQQFLDGLKVFGFDLGWLLSAGCVFDMDFHGRLLAATIGPILAVLLLAGTYAAATRVNREANEKLRIIWDKHVFVFLLLTFLVYSSVSSTLFKTFACDELENGKNYLRTDYRIECDSSKHKVFQVYAGFMILLYPLGIPVLYSILLFRDREVLKKDKDDRDNSARVKSTSELWQPYKPSVFYYEVIECGRRILLTGIVVFIYPNTAAQLAITLMMAFFFALLSEAISPYSSRWETWVNRMGHVVVAVSVYVALLLKVDVSDERADSQSVFEAVLVTVHACMILSVVVETFVVA-GLW-RRRLREDVPARFRRGKFLFR 1341
            +EA+CDGC V C+ CSF+E   VP CSD ++H  S+GG VTL+ L I+PGYWR TPSS+ +L CYNADACLGG      Y                                                                   V ER G +VPLQSVKIV+V+WQI+TQF S AN+ +P VYQ+FLD L++F FDLGW+LSAGCVFD+DFH RLL +TI PI+ +L LA  YAAA R +  ++E L+ +W KHV + LLLTFLVY+SVS+ LF+TFAC+EL++ KNYLR DYRIECDS KH  FQVYAGFMI+LY +GIP LY   LFRD +VL++D+ DR+  AR+  T++LW+PY+PSVFYYEVIEC RR+LL G+VVFIYPNTAAQ+A+ L++A  FA++SEA++PY+SRW+TW+ RMGH VVAVS+YVALLLKVDVSDERA SQ VFE++LV  H CM+  V++E  + A  LW  +R ++   + FRRG+ +FR
Sbjct:  477 YEAICDGCPVECEGCSFEEPQLVPKCSDALEHSNSSGGTVTLDALVIEPGYWRATPSSENVLECYNADACLGGVTGSESYCLEGYEGPYCAVCSGGYTARLGMACSKCSDRAGSIALGVSVSVAGLLFTVALVSYAVSGESEGRARGVVERTGRFVPLQSVKIVIVAWQILTQFTSVANIRFPHVYQRFLDALELFNFDLGWVLSAGCVFDVDFHDRLLVSTIAPIVGLLFLAAVYAAAARNSHRSSEDLQRVWHKHVSLVLLLTFLVYASVSAVLFQTFACEELDDRKNYLRADYRIECDSPKHSAFQVYAGFMIVLYTVGIPALYGGFLFRDSDVLRRDEADREQLARIAPTADLWKPYRPSVFYYEVIECARRVLLAGVVVFIYPNTAAQIAVALLIAVVFAMISEALAPYASRWDTWLCRMGHAVVAVSMYVALLLKVDVSDERASSQRVFESLLVAAHVCMVGVVLLEVIMEAISLWVEKRGQQPASSSFRRGRGIFR 979          
BLAST of mRNA_Ecto-sp13_S_contig10257.277.1 vs. uniprot
Match: A0A6H5K0E9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0E9_9PHAE)

HSP 1 Score: 536 bits (1381), Expect = 5.170e-174
Identity = 285/505 (56.44%), Postives = 343/505 (67.92%), Query Frame = 1
Query:   40 FEAVCDGCRVACDRCSFDEQPAVPTCSDVMDHGTSTGGNVTLETLSIDPGYWRVTPSSKEILPCYNADACLGG-----------------------------------------------------------------AGE----RRIYVFERLGWYVPLQSVKIVVVSWQIVTQFASAANVVYPGVYQQFLDGLKVFGFDLGWLLSAGCVFDMDFHGRLLAATIGPILAVLLLAGTYAAATRVNREANEKLRIIWDKHVFVFLLLTFLVYSSVSSTLFKTFACDELENGKNYLRTDYRIECDSSKHKVFQVYAGFMILLYPLGIPVLYSILLFRDREVLKKDKDDRDNSARVKSTSELWQPYKPSVFYYEVIECGRRILLTGIVVFIYPNTAAQLAITLMMAFFFALLSEAISPYSSRWETWVNRMGHVVVAVSVYVALLLKVDVSDERADSQSVFEAVLVTVHACMILSVVVETFVVAGLWR--RRLREDVPARFRRGKFLFR 1341
            FEA+C+GC   CD C F E    P C++VMDH TS GGNVTL+TLSID G+WR + SS E+L CY+ADACLGG                                                                 +GE    R+  + E +  Y+PLQS+KIV+VSWQI+TQF S ANV YP VYQ  LD L VF FDL WLLSAGCV DM+FHGRLL +TI PI+A+LLLA TYAAA R+NR   EKL IIW+KHV V LLLTF VYSSVSSTLF+ FACD+L+  K+YLR DY IEC+SS+H+  QVYAGFMI++Y +GIP LY+ LLF+ R+VLK +  DR+   RVKS S LW+PYKP+VFYYEVIEC RR+LL G+VVFIYPNTAAQ+A+TL++AF FALLSE ++PY+SRW+TW++R+GH+VV +S+YVALLLKVDVSDERA SQ VFE+VLV VH CMIL V+VE  V A   R  RR       RFR GK L R
Sbjct: 1010 FEAICNGCETTCDGCVFAEGSLAPICTEVMDHSTSDGGNVTLQTLSIDRGFWRASTSSTEVLACYHADACLGGVTGASGYCEEGYEGPYCGICSDGYTEQLSFACSKCSENSAGGIAVAVVLALLIVFLAVAVVSYVTSGEVGMGRKGGIVELVTRYIPLQSLKIVIVSWQILTQFTSVANVTYPDVYQDLLDVLDVFNFDLSWLLSAGCVVDMNFHGRLLVSTISPIVALLLLACTYAAAARINRGEPEKLNIIWNKHVTVVLLLTFFVYSSVSSTLFRAFACDDLDYSKDYLRADYSIECNSSEHRGIQVYAGFMIVIYTVGIPALYAELLFKSRDVLKDEDPDREEPPRVKSISNLWEPYKPAVFYYEVIECFRRVLLAGVVVFIYPNTAAQIAVTLLIAFAFALLSEGLAPYASRWDTWISRVGHIVVFLSMYVALLLKVDVSDERASSQEVFESVLVAVHVCMILFVLVEAAVQAWSLREERRSLSAASPRFRSGKSLTR 1514          
BLAST of mRNA_Ecto-sp13_S_contig10257.277.1 vs. uniprot
Match: D7FHH1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHH1_ECTSI)

HSP 1 Score: 523 bits (1346), Expect = 2.370e-173
Identity = 278/496 (56.05%), Postives = 334/496 (67.34%), Query Frame = 1
Query:   25 SGNGTFEAVCDGCRVACDRCSFDEQPAVPTCSDVMDHGTSTGGNVTLETLSIDPGYWRVTPSSKEILPCYNADACLGGAGERRIYVFE----------------RLGW---------------------------------------------------YVPLQSVKIVVVSWQIVTQFASAANVVYPGVYQQFLDGLKVFGFDLGWLLSAGCVFDMDFHGRLLAATIGPILAVLLLAGTYAAATRVNREANEKLRIIWDKHVFVFLLLTFLVYSSVSSTLFKTFACDELENGKNYLRTDYRIECDSSKHKVFQVYAGFMILLYPLGIPVLYSILLFRDREVLKKDKDDRDNSARVKSTSELWQPYKPSVFYYEVIECGRRILLTGIVVFIYPNTAAQLAITLMMAFFFALLSEAISPYSSRWETWVNRMGHVVVAVSVYVALLLKVDVSDERADSQSVFEAVLVTVHACMILSVVVETFVVAGLWRRRLREDVPA 1311
            SG+   EA C GC+  CD C   + P VP CSDV+ H  S GG VTLETLSIDPGYWR T SS E+L CYN DAC+GG      Y  E                +LG+                                                   Y+PLQ++KI+VV+WQIVTQF SAANV YP VYQ+FL+GL VF FD+ W+LSAGCV D+DFH RLL +TIGPI+A+L LA TY A +R+NR     L+++WD+HV + LLL FLVYS VSS +F+TFACD+LE G  YLR DYRIECDSSKH+ F+VYAGFMILLYP+GIP  Y  LL RDR+VL+KD D R++  RV S S LWQPY+PSV+YYEVIECGRRILLTG+VVFIYPNTAAQ+AITL+M   FA+LSEA+ PY+  W+TWV+R+ H VV +SVYVALLLKVDVS+E+  SQ VFEAVLV  HACMIL+VVVET ++ G   R   +D PA
Sbjct:  515 SGDALDEA-CSGCQTTCDGCV--QPPVVPLCSDVIPHSRSDGGLVTLETLSIDPGYWRATNSSTEVLACYNVDACVGGITGATEYCVEGYEGPYCAICSDDYSAQLGFTCSKCPNRAGGILLATALAVIGLFTVVAVVSYVAWRVDPNTGCAMAGHLKRYLPLQTLKILVVAWQIVTQFTSAANVTYPDVYQRFLNGLDVFNFDISWVLSAGCVMDLDFHDRLLLSTIGPIMALLFLAATYRAGSRINRGNAATLQLVWDRHVSMVLLLVFLVYSGVSSVVFQTFACDQLEGGGEYLRADYRIECDSSKHQGFRVYAGFMILLYPVGIPAFYGALLLRDRDVLEKDPDGREDPPRVASISNLWQPYRPSVYYYEVIECGRRILLTGLVVFIYPNTAAQIAITLIMTVVFAVLSEALRPYAQAWDTWVSRVSHAVVFMSVYVALLLKVDVSNEKGSSQKVFEAVLVAAHACMILAVVVET-ILLGCPSRVKEQDEPA 1006          
BLAST of mRNA_Ecto-sp13_S_contig10257.277.1 vs. uniprot
Match: D8LSC0_ECTSI (Polymorphic Outer membrane protein G/I family n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LSC0_ECTSI)

HSP 1 Score: 522 bits (1345), Expect = 9.640e-168
Identity = 274/489 (56.03%), Postives = 333/489 (68.10%), Query Frame = 1
Query:   40 FEAVCDGCRVACDRCSFDEQPAVPTCSDVMDHGTSTGGNVTLETLSIDPGYWRVTPSSKEILPCYNADACLGG----------------------------------------------------------------AGERRIY---VFERLGWYVPLQSVKIVVVSWQIVTQFASAANVVYPGVYQQFLDGLKVFGFDLGWLLSAGCVFDMDFHGRLLAATIGPILAVLLLAGTYAAATRVNREANEKLRIIWDKHVFVFLLLTFLVYSSVSSTLFKTFACDELENGKNYLRTDYRIECDSSKHKVFQVYAGFMILLYPLGIPVLYSILLFRDREVLK-KDKDDRDNSARVKSTSELWQPYKPSVFYYEVIECGRRILLTGIVVFIYPNTAAQLAITLMMAFFFALLSEAISPYSSRWETWVNRMGHVVVAVSVYVALLLKVDVSDERADSQSVFEAVLVTVHACMILSVVVETFVVAGLWRRRLRED 1302
            FEAVC+GC+ AC  C+F +   VPTC+D+++H TS+ G  TLETLSI  GYWR T S  E+L CY+ADACLGG                                                                +GER      + ER+G Y+PLQSVKIVVV+WQI+TQF + ANV YP VYQ FL+GL+VF FDL W+LSAGCV D+DFH RLL ATIGPI A LLL  TYAAA R++R A E L  +  KHVF+ LLLTF VYSSVS+TLF+TFAC+ LE+GK YL  DYRIECDSSKHK F+VYAGFM+LLY  GIP LYS LLFRDR+VLK ++   +D  +R  STS+LW+PYKPSVFYYEV+EC RR+LL G+VVFIYPN++AQ+AITL++AF F L+SE ++PY+SRW+TW+NRMGHVVV  S+Y+ALLLKVDVS ER+ SQ VFEAVLV  H  M++  V ET V+A   R   R D
Sbjct: 1111 FEAVCNGCQTACVGCAFADPLLVPTCTDLLEHSTSSDGRDTLETLSIQAGYWRATTSGTEVLACYHADACLGGVTGTSGYCLEGYEGPYCAICSEGYSAQMSFTCRTCSDNAGGIALAAALAVVGLVLLVAVVSYVSSGERNGKGRGIVERVGRYIPLQSVKIVVVAWQIMTQFTNVANVTYPHVYQNFLNGLEVFNFDLSWMLSAGCVVDVDFHDRLLMATIGPIFAALLLVCTYAAAVRIHRGATETLENVRHKHVFMVLLLTFFVYSSVSATLFRTFACETLEDGKTYLLADYRIECDSSKHKRFEVYAGFMVLLYTAGIPALYSFLLFRDRDVLKGREAAGQDLRSRATSTSDLWKPYKPSVFYYEVVECARRVLLAGVVVFIYPNSSAQIAITLIVAFTFVLISEGLAPYASRWDTWINRMGHVVVVASMYLALLLKVDVSKERSSSQGVFEAVLVVAHVVMVVVXVAETLVLALALRAERRRD 1599          
BLAST of mRNA_Ecto-sp13_S_contig10257.277.1 vs. uniprot
Match: D7G5Y7_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Y7_ECTSI)

HSP 1 Score: 516 bits (1330), Expect = 2.850e-163
Identity = 272/501 (54.29%), Postives = 332/501 (66.27%), Query Frame = 1
Query:   43 EAVCDGCRVACDRCS-FDEQPAVPTCSDVMDHGTSTGGNVTLETLSIDPGYWRVTPSSKEILPCYNADACLGGA-------------------------------------------------------------------GERRIYVFERLGWYVPLQSVKIVVVSWQIVTQFASAANVVYPGVYQQFLDGLKVFGFDLGWLLSAGCVFDMDFHGRLLAATIGPILAVLLLAGTYAAATRVNREANEKLRIIWDKHVFVFLLLTFLVYSSVSSTLFKTFACDELENGKNYLRTDYRIECDSSKHKVFQVYAGFMILLYPLGIPVLYSILLFRDREVLKKDKDDRDNSARVKSTSELWQPYKPSVFYYEVIECGRRILLTGIVVFIYPNTAAQLAITLMMAFFFALLSEAISPYSSRWETWVNRMGHVVVAVSVYVALLLKVDVSDERADSQSVFEAVLVTVHACMILSVVVETFVVAGLWRRRLREDVPARFRRGKFLFR 1341
            EA CDGC+  CD    F+E P VP C+  M+H  S GG   +  L +D G+WR TP + ++LPCYNA+ACL G                                                                    GE      ERLG Y+PLQS KIVVVSWQI+TQF + ANV YP VYQ+FLDGL VF FDL W+LSAGC+  +DFH RLL +TIGPI+A+L L  TYAAATR+NR A E L++IW++HV + LLLT  VYSSVSSTLF+TFAC+ L +G+ YLR DYRI CDSSKHK  QVYAG M+++Y +GIP LY +LLFRDR+VLK+   DR+ +ARV STSELW+PYKPSVFYYEVIECGRR+LL G+VVFIYPNTA Q+AITL+MAF F ++SE ++PY+SRW+TW++RMGH VV VS+YVALLLKVDVS+ER +SQ VFE VLV  HACMIL +V+ET V+        R+    RF   K LFR
Sbjct: 1567 EAACDGCQTPCDDDGCFEEPPLVPICALAMEHTGSAGGTNNITLLRVDDGFWRATPYAIDVLPCYNANACLAGVTNSSGSCLDGYEGPYCSICSDGYTAGLSFKCSECSDSAGGIILASFLAVVALLVAVAVVSYVVSDKVGEGSRGTVERLGRYIPLQSAKIVVVSWQILTQFTAVANVTYPDVYQRFLDGLGVFNFDLSWVLSAGCIVVVDFHDRLLISTIGPIVALLFLCWTYAAATRINRGATETLQVIWNRHVSMVLLLTVFVYSSVSSTLFQTFACESLADGETYLRADYRITCDSSKHKALQVYAGVMVVVYTVGIPALYGVLLFRDRDVLKRSGADREETARVISTSELWKPYKPSVFYYEVIECGRRVLLAGVVVFIYPNTAPQIAITLLMAFAFVVVSEGLAPYASRWDTWLSRMGHAVVFVSMYVALLLKVDVSNERVESQRVFEVVLVAAHACMILVIVIETVVLTCALTVGERDGPALRF--WKALFR 2065          
BLAST of mRNA_Ecto-sp13_S_contig10257.277.1 vs. uniprot
Match: D7G301_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G301_ECTSI)

HSP 1 Score: 489 bits (1259), Expect = 4.120e-158
Identity = 238/368 (64.67%), Postives = 294/368 (79.89%), Query Frame = 1
Query:  244 ACLGGAGERRIYVFERLGWYVPLQSVKIVVVSWQIVTQFASAANVVYPGVYQQFLDGLKVFGFDLGWLLSAGCVFDMDFHGRLLAATIGPILAVLLLAGTYAAATRVNREANEKLRIIWDKHVFVFLLLTFLVYSSVSSTLFKTFACDELENGKNYLRTDYRIECDSSKHKVFQVYAGFMILLYPLGIPVLYSILLFRDREVLKKDKDDRDNSARVKSTSELWQPYKPSVFYYEVIECGRRILLTGIVVFIYPNTAAQLAITLMMAFFFALLSEAISPYSSRWETWVNRMGHVVVAVSVYVALLLKVDVSDERADSQSVFEAVLVTVHACMILSVVVETFVVAGLWRRRLREDVPARFRRGKFLFRGG 1347
            A  G  G+ R  V  RLG Y+PLQSVKIV+V+WQI+TQF S ANV YP VY++FLDGL VF FDL W+LSAGC+FD+DFH RLLA+T+ P++ +L LAGTYAAA  +NR   E L++IW+KHV + LLLTFL+YSSVS+TLFK F C+ELE+G NYLR DY I+CDSSKHK FQVYAGFM+++Y +GIP LY+ LLFRDR VLK    DR+ +AR  STS+LW+PYKPSVFYYEVIECGRR+LL G+VVFI+PNTAAQ+AITLMMAF F ++SE ++P++S+W+ W+NR GH VV VS+Y+ALLLKVDVS ERA SQ V+E VLV  HACMIL+V+ ETFV+    +   R++   RFR GK LFR G
Sbjct:  891 AMSGRVGDVRSGVVARLGQYIPLQSVKIVIVAWQILTQFTSVANVTYPDVYKRFLDGLDVFNFDLSWVLSAGCIFDIDFHDRLLASTVSPVIGLLFLAGTYAAAVSMNRGKAESLQVIWNKHVSLVLLLTFLIYSSVSATLFKAFVCEELEDGTNYLRADYTIDCDSSKHKAFQVYAGFMVVVYVVGIPALYAFLLFRDRHVLKDHHADREQTARTTSTSDLWKPYKPSVFYYEVIECGRRVLLAGVVVFIFPNTAAQIAITLMMAFAFVMVSEGLAPFASKWDAWLNRTGHTVVFVSMYIALLLKVDVSGERAGSQRVYEIVLVAAHACMILAVMTETFVLTWSLKVEQRQEPTTRFRHGK-LFRSG 1257          
BLAST of mRNA_Ecto-sp13_S_contig10257.277.1 vs. uniprot
Match: D7FTI5_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTI5_ECTSI)

HSP 1 Score: 477 bits (1227), Expect = 7.200e-151
Identity = 252/496 (50.81%), Postives = 314/496 (63.31%), Query Frame = 1
Query:   22 QSGNGTFEAVCDGCRVACDRCSFDEQPAVPTCSDVMDHGTSTGGNVTLETLSIDPGYWRVTPSSKEILPCYNADACLGGAGERRIYVFERL---------------------------------------------------------------GW------YVPLQSVKIVVVSWQIVTQFASAANVVYPGVYQQFLDGLKVFGFDLGWLLSAGCVFDMDFHGRLLAATIGPILAVLLLAGTYAAATRVNREANEKLRIIWDKHVFVFLLLTFLVYSSVSSTLFKTFACDELENGKNYLRTDYRIECDSSKHKVFQVYAGFMILLYPLGIPVLYSILLFRDREVLKKDKDDRDNSARVKSTSELWQPYKPSVFYYEVIECGRRILLTGIVVFIYPNTAAQLAITLMMAFFFALLSEAISPYSSRWETWVNRMGHVVVAVSVYVALLLKVDVSDERADSQSVFEAVLVTVHACMILSVVVETFVVAGLWRRRLRED 1302
            Q  +  FE +C GC V C+ C FDE   VP C++VM+H TS GGN+TLE LSID GYWR T SS+++L CY+A+ACLGG      Y  E                                                                 GW      Y+PLQSVKIV+ +WQI+TQF S ANV YP VY+ FL  L +F FDLGW LS  C  DMDFH RLL +TI PI A+L LA TY  A  + R   + L  +  KH  + LLLTF VYSSVSS LF++FAC+EL + K YLR+DYRIECDSSKHK FQVYA FMIL+Y +GIP LY+ LLFRDR++LK+D   R +  RV S ++LW+PY    FYYEVIECGRR+LL G+VVFIYPNTAAQ+A+TLM+AF F ++SEA++PY S W+ W+NRMGHVVV  S+++ LLLKV+VSDE   SQ VFE VLV VHA M++++VVET V+    R  L+++
Sbjct: 1115 QQSDDPFEVMCSGCEVTCEGCVFDEGLLVPACTEVMEHATSDGGNITLEALSIDSGYWRATESSEDVLACYHAEACLGGVTATSGYCLEGYEGPYCSVCSNGYSEQLGFVCSKCPEKNTGGIVILVVLAVGTTIVLAAIYSYVTSGEDGMGTGCGWIERVTRYIPLQSVKIVIAAWQILTQFTSIANVTYPDVYEDFLGVLDMFNFDLGWALSVSCTIDMDFHDRLLVSTISPIAALLFLACTYFRAWSLYRRKPDTLGAVQHKHASMVLLLTFFVYSSVSSILFRSFACEELADRKIYLRSDYRIECDSSKHKGFQVYAVFMILVYTVGIPALYAGLLFRDRDLLKQDTSKRRDPPRVTSIADLWEPYNRWAFYYEVIECGRRVLLAGVVVFIYPNTAAQIAVTLMIAFAFVVVSEALNPYKSGWDRWINRMGHVVVFSSMFLGLLLKVNVSDEHVASQRVFEIVLVAVHALMVMAIVVETVVLFFQLRAELKKE 1610          
BLAST of mRNA_Ecto-sp13_S_contig10257.277.1 vs. uniprot
Match: D7FTL7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTL7_ECTSI)

HSP 1 Score: 466 bits (1199), Expect = 1.330e-149
Identity = 248/493 (50.30%), Postives = 308/493 (62.47%), Query Frame = 1
Query:   40 FEAVCDGCRVACDRCSFDEQPAVPTCSDVMDHGTSTGGNVTLETLSIDPGYWRVTPSSKEILPCYNADACLGGAGERRIY---------------------------------------------------------------------VFERLGWYVPLQSVKIVVVSWQIVTQFASAANVVYPGVYQQFLDGLKVFGFDLGWLLSAGCVFDMDFHGRLLAATIGPILAVLLLAGTYAAATRVNREANEKLRI-IWDKHVFVFLLLTFLVYSSVSSTLFKTFACDELENGKNYLRTDYRIECDSSKHKVFQVYAGFMILLYPLGIPVLYSILLFRDREVLKKDKDDRDNSARVKSTSELWQPYKPSVFYYEVIECGRRILLTGIVVFIYPNTAAQLAITLMMAFFFALLSEAISPYSSRWETWVNRMGHVVVAVSVYVALLLKVDVSDERADSQSVFEAVLVTVHACMILSVVVETFVVAGLWRRRLREDVP 1308
            FEAVC GC + CD C F++    P CS+VM H TSTGGN TL+ +SID GYWR T  S+E+L C+ ADACLGG      Y                                                                     + ER+  ++PLQSVKIV+VSWQI+TQF S ANV YP VYQ FLD + VF FDL W+ S GC+FD+DFH RLL +TI P++A+  LA T AA  R NR + + L+  +W KHV + LLLTFLVYS+VSS LF++FAC+EL +GKNYLR+DYRIECDSS HK FQVYAGFMI+LYP+GIP LY+ LLFRDR+VL+KD+ +R++  RV STS LW+PYKPS FYYE+                        A+TL++A  F +LSEA+ PYSSRW+ W +RMGH+VV VS+YVALLLKVDVSDERA SQ VFEA+LV VHACM+  VVVET +++   R     + P
Sbjct:  727 FEAVCAGCDIVCDGCVFEQGLVGPACSEVMAHSTSTGGNTTLQEVSIDRGYWRATSVSEEVLECFQADACLGGVTGTSGYCLEGYEGPYCSICSGGYTKQLGFSCTKCSENKAGGIVVXXXXXXXXXXXXXXXXSYIMSRDDDGGAEGGLVERMARHIPLQSVKIVIVSWQILTQFTSVANVTYPDVYQDFLDAMDVFNFDLSWVFSTGCIFDIDFHDRLLVSTISPLVALSFLACTNAAVARTNRGSPQNLQNNVWQKHVSMGLLLTFLVYSNVSSVLFQSFACEELHDGKNYLRSDYRIECDSSGHKAFQVYAGFMIVLYPVGIPALYAGLLFRDRDVLRKDEINREDPPRVTSTSHLWEPYKPSAFYYEI------------------------AVTLVIAVAFTILSEALDPYSSRWDAWTSRMGHMVVLVSMYVALLLKVDVSDERASSQRVFEAILVAVHACMVTLVVVETIILSVSLRAAKEREAP 1195          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10257.277.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2X5_ECTSI1.510e-28082.45Adhesin-like protein n=1 Tax=Ectocarpus siliculosu... [more]
A0A6H5K7Z1_9PHAE3.390e-27982.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G2Z8_ECTSI5.530e-17853.68Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K0E9_9PHAE5.170e-17456.44Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7FHH1_ECTSI2.370e-17356.05Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LSC0_ECTSI9.640e-16856.03Polymorphic Outer membrane protein G/I family n=3 ... [more]
D7G5Y7_ECTSI2.850e-16354.29Polymorphic Outer membrane protein G/I family n=1 ... [more]
D7G301_ECTSI4.120e-15864.67Polymorphic Outer membrane protein G/I family n=1 ... [more]
D7FTI5_ECTSI7.200e-15150.81Polymorphic outer membrane protein n=1 Tax=Ectocar... [more]
D7FTL7_ECTSI1.330e-14950.30Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10257contigEcto-sp13_S_contig10257:1369..3375 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score810.4
Seed ortholog evalue4.1e-232
Seed eggNOG ortholog2880.D7G2X5
Model size1353
Hectar predicted targeting categoryother localisation
Exons3
EggNOG OGs2BFIX@1,2S176@2759
Cds size1353
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462519.2925467-CDS-Ecto-sp13_S_contig10257:1368..16261681462519.2925467-CDS-Ecto-sp13_S_contig10257:1368..1626Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10257 1369..1626 +
1681462519.3028946-CDS-Ecto-sp13_S_contig10257:2077..21761681462519.3028946-CDS-Ecto-sp13_S_contig10257:2077..2176Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10257 2078..2176 +
1681462519.312136-CDS-Ecto-sp13_S_contig10257:2379..33751681462519.312136-CDS-Ecto-sp13_S_contig10257:2379..3375Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10257 2380..3375 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10257.277.1prot_Ecto-sp13_S_contig10257.277.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig10257 1369..3375 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig10257.277.1

>prot_Ecto-sp13_S_contig10257.277.1 ID=prot_Ecto-sp13_S_contig10257.277.1|Name=mRNA_Ecto-sp13_S_contig10257.277.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=451bp
MFRLVVSQSGNGTFEAVCDGCRVACDRCSFDEQPAVPTCSDVMDHGTSTG
GNVTLETLSIDPGYWRVTPSSKEILPCYNADACLGGAGERRIYVFERLGW
YVPLQSVKIVVVSWQIVTQFASAANVVYPGVYQQFLDGLKVFGFDLGWLL
SAGCVFDMDFHGRLLAATIGPILAVLLLAGTYAAATRVNREANEKLRIIW
DKHVFVFLLLTFLVYSSVSSTLFKTFACDELENGKNYLRTDYRIECDSSK
HKVFQVYAGFMILLYPLGIPVLYSILLFRDREVLKKDKDDRDNSARVKST
SELWQPYKPSVFYYEVIECGRRILLTGIVVFIYPNTAAQLAITLMMAFFF
ALLSEAISPYSSRWETWVNRMGHVVVAVSVYVALLLKVDVSDERADSQSV
FEAVLVTVHACMILSVVVETFVVAGLWRRRLREDVPARFRRGKFLFRGGV
*
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mRNA from alignment at Ecto-sp13_S_contig10257:1369..3375+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig10257.277.1 ID=mRNA_Ecto-sp13_S_contig10257.277.1|Name=mRNA_Ecto-sp13_S_contig10257.277.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2007bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10257:1369..3375+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTTTCGGCTTGTTGTTTCGCAGTCCGGTAATGGTACCTTCGAGGCTGT CTGCGATGGATGTCGAGTTGCGTGCGATAGATGCTCCTTTGATGAACAAC CTGCAGTCCCAACTTGCTCTGATGTGATGGACCATGGCACAAGCACGGGT GGCAACGTTACCCTGGAAACATTGTCGATTGACCCCGGGTACTGGAGGGT TACGCCATCCAGCAAAGAGATTCTTCCATGCTACAACGCTGACGCTTGCC TAGGAGGAGTGACAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNCTGTTGTGATCATGTACATCATG TCTGGGGAGGCAGGGGAGCGGAGAATCTACGTGTTCGAGCGCTTGGGGTG GTACGTTCCGCTGCAATCTGTGAAAATCGTCGTCGTCTCGTGGCAAATTG TGACACAGGTATGAAGTCTTGCAGACATCGAATATGGGTGGGAACGGGAT GGTTGATTCACCGCAATAGATGCGCCTTCATTAATCTATTTCGCCTTCCG ATTTGTGCCTTGAGCTGGAAATCGGGAAAAGGTTCCTACCACTCGCAGAG ACATGACACGCCCAGCTGCTTGCCCGCGTCTACCTCATCACCCGTTCCAA TACTGCTGTAGTTCGCTTCTGCGGCGAACGTCGTCTACCCGGGTGTGTAC CAGCAGTTCTTGGACGGCCTGAAGGTGTTTGGCTTCGACCTGGGGTGGTT GCTGTCTGCCGGATGTGTCTTCGACATGGACTTTCATGGTCGACTGCTGG CAGCTACGATCGGCCCGATTCTCGCCGTTCTTCTCTTAGCTGGAACCTAC GCCGCTGCGACCCGTGTCAATCGCGAGGCCAATGAGAAGCTGCGGATCAT CTGGGACAAGCACGTGTTTGTGTTCCTGCTGCTGACGTTTCTGGTATACT CAAGTGTAAGCTCCACCTTGTTCAAAACGTTTGCGTGTGACGAGCTCGAG AACGGCAAAAACTACTTGCGTACAGACTACCGCATCGAATGCGACTCAAG CAAGCATAAGGTCTTCCAAGTGTACGCAGGTTTCATGATCCTGTTGTACC CCCTAGGCATTCCCGTGTTGTATAGCATTCTGCTGTTTAGGGATCGTGAG GTGTTGAAAAAAGACAAAGACGACCGAGACAACAGTGCTCGCGTCAAGTC GACCTCCGAGCTGTGGCAACCGTACAAGCCGTCGGTGTTCTACTACGAGG TCATCGAATGCGGCCGACGCATATTACTGACTGGGATAGTCGTGTTCATT TACCCCAACACCGCAGCCCAGCTTGCAATCACGCTGATGATGGCCTTCTT TTTCGCGTTGCTTTCTGAAGCGATATCTCCGTACTCATCTAGGTGGGAGA CCTGGGTCAATCGTATGGGCCATGTGGTGGTAGCTGTAAGTGTGTATGTT GCTCTCTTGCTGAAGGTTGACGTTTCCGACGAGCGGGCTGACAGTCAGAG CGTGTTTGAAGCAGTCCTTGTTACCGTCCACGCGTGCATGATACTTTCGG TTGTTGTAGAGACCTTTGTTGTGGCAGGCTTGTGGAGGCGGAGACTGCGG GAGGATGTGCCAGCCAGATTTCGTCGCGGGAAATTTTTGTTTCGCGGGGG CGTATAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10257:1369..3375+

>mRNA_Ecto-sp13_S_contig10257.277.1 ID=mRNA_Ecto-sp13_S_contig10257.277.1|Name=mRNA_Ecto-sp13_S_contig10257.277.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1353bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10257:1369..3375+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTTTCGGCTTGTTGTTTCGCAGTCCGGTAATGGTACCTTCGAGGCTGT
CTGCGATGGATGTCGAGTTGCGTGCGATAGATGCTCCTTTGATGAACAAC
CTGCAGTCCCAACTTGCTCTGATGTGATGGACCATGGCACAAGCACGGGT
GGCAACGTTACCCTGGAAACATTGTCGATTGACCCCGGGTACTGGAGGGT
TACGCCATCCAGCAAAGAGATTCTTCCATGCTACAACGCTGACGCTTGCC
TAGGAGGAGCAGGGGAGCGGAGAATCTACGTGTTCGAGCGCTTGGGGTGG
TACGTTCCGCTGCAATCTGTGAAAATCGTCGTCGTCTCGTGGCAAATTGT
GACACAGTTCGCTTCTGCGGCGAACGTCGTCTACCCGGGTGTGTACCAGC
AGTTCTTGGACGGCCTGAAGGTGTTTGGCTTCGACCTGGGGTGGTTGCTG
TCTGCCGGATGTGTCTTCGACATGGACTTTCATGGTCGACTGCTGGCAGC
TACGATCGGCCCGATTCTCGCCGTTCTTCTCTTAGCTGGAACCTACGCCG
CTGCGACCCGTGTCAATCGCGAGGCCAATGAGAAGCTGCGGATCATCTGG
GACAAGCACGTGTTTGTGTTCCTGCTGCTGACGTTTCTGGTATACTCAAG
TGTAAGCTCCACCTTGTTCAAAACGTTTGCGTGTGACGAGCTCGAGAACG
GCAAAAACTACTTGCGTACAGACTACCGCATCGAATGCGACTCAAGCAAG
CATAAGGTCTTCCAAGTGTACGCAGGTTTCATGATCCTGTTGTACCCCCT
AGGCATTCCCGTGTTGTATAGCATTCTGCTGTTTAGGGATCGTGAGGTGT
TGAAAAAAGACAAAGACGACCGAGACAACAGTGCTCGCGTCAAGTCGACC
TCCGAGCTGTGGCAACCGTACAAGCCGTCGGTGTTCTACTACGAGGTCAT
CGAATGCGGCCGACGCATATTACTGACTGGGATAGTCGTGTTCATTTACC
CCAACACCGCAGCCCAGCTTGCAATCACGCTGATGATGGCCTTCTTTTTC
GCGTTGCTTTCTGAAGCGATATCTCCGTACTCATCTAGGTGGGAGACCTG
GGTCAATCGTATGGGCCATGTGGTGGTAGCTGTAAGTGTGTATGTTGCTC
TCTTGCTGAAGGTTGACGTTTCCGACGAGCGGGCTGACAGTCAGAGCGTG
TTTGAAGCAGTCCTTGTTACCGTCCACGCGTGCATGATACTTTCGGTTGT
TGTAGAGACCTTTGTTGTGGCAGGCTTGTGGAGGCGGAGACTGCGGGAGG
ATGTGCCAGCCAGATTTCGTCGCGGGAAATTTTTGTTTCGCGGGGGCGTA
TAG
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