prot_Ecto-sp13_S_contig13479.2769.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13479.2769.1
Unique Nameprot_Ecto-sp13_S_contig13479.2769.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length153
Homology
BLAST of mRNA_Ecto-sp13_S_contig13479.2769.1 vs. uniprot
Match: A0A6H5KK32_9PHAE (ABC protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KK32_9PHAE)

HSP 1 Score: 291 bits (744), Expect = 2.590e-88
Identity = 151/152 (99.34%), Postives = 151/152 (99.34%), Query Frame = 0
Query:    1 VVSFWSSDPLYARHPLGFYLFGVTASAAVVGVFSHLRTMWAFYLGLGASKRLHGALLRRVLHAPVSFFDTTPVGRIIQRFSKDTDQVDQNLISQVAMVINGGLGVLAAGCAIIVATPVFAVILAPLSIVYIRVMNYFRHVAIELKRLESITK 152
            VVSFWSSDPLYARHPLGFYLFGVTASAAVVGVFSHLRTMWAFYLGLGASKRLHGALLRRVLHAPVSFFDTTPVGRIIQRFSKDTDQVDQNLISQVAMVINGGLGVLAAGCAIIVATPVFA ILAPLSIVYIRVMNYFRHVAIELKRLESITK
Sbjct: 1109 VVSFWSSDPLYARHPLGFYLFGVTASAAVVGVFSHLRTMWAFYLGLGASKRLHGALLRRVLHAPVSFFDTTPVGRIIQRFSKDTDQVDQNLISQVAMVINGGLGVLAAGCAIIVATPVFAFILAPLSIVYIRVMNYFRHVAIELKRLESITK 1260          
BLAST of mRNA_Ecto-sp13_S_contig13479.2769.1 vs. uniprot
Match: A0A835YZ25_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ25_9STRA)

HSP 1 Score: 179 bits (455), Expect = 2.080e-49
Identity = 87/138 (63.04%), Postives = 114/138 (82.61%), Query Frame = 0
Query:    1 VVSFWSSDPLYARHPLGFYLFGVTASAAVVGVFSHLRTMWAFYLGLGASKRLHGALLRRVLHAPVSFFDTTPVGRIIQRFSKDTDQVDQNLISQVAMVINGGLGVLAAGCAIIVATPVFAVILAPLSIVYIRVMNYFR 138
            VVSFW+SDP Y RH L FYL GVTASA +VG  +HLRT+ AF +G+ AS++LHG +L RVLHAPVS+FDTTP+GR++QRFSKDTD++DQ LISQ+AM+IN  L ++ +  AI+VATPVFA+ + PLS +Y+ +MN+FR
Sbjct:  992 VVSFWTSDPNYVRHSLKFYLGGVTASAMLVGALAHLRTLLAFAMGVRASRKLHGDMLDRVLHAPVSYFDTTPIGRLVQRFSKDTDEIDQQLISQIAMLINATLSMIGSVGAIVVATPVFALAILPLSSIYLAIMNFFR 1129          
BLAST of mRNA_Ecto-sp13_S_contig13479.2769.1 vs. uniprot
Match: W7U3C1_9STRA (Multidrug resistance-associated protein 1 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U3C1_9STRA)

HSP 1 Score: 132 bits (333), Expect = 5.250e-33
Identity = 70/152 (46.05%), Postives = 102/152 (67.11%), Query Frame = 0
Query:    1 VVSFWSSDPLYARHPLGFYLFGVTASAAVVGVFSHLRTMWAFYLGLGASKRLHGALLRRVLHAPVSFFDTTPVGRIIQRFSKDTDQVDQNLISQVAMVINGGLGVLAAGCAIIVATPVFAVILAPLSIVYIRVMNYFRHVAIELKRLESITK 152
            +++ W+SDPL+ + P   YL GV++ AA+V  F++LRT  +   G+ AS  LH   L++VL AP+ +FDTTP+G ++QRFS D DQVDQ L   + M I     ++    AI+ ATP F+V L P+S +Y+ VMNYFR V  ELKRL+S+++
Sbjct:  957 IIAAWTSDPLHIKRPARVYLLGVSSMAAMVAAFNYLRTYLSVLAGVRASDYLHHRALQKVLGAPMRYFDTTPLGSLVQRFSSDLDQVDQQLPGTLGMFITCVFQLVGTLGAILAATPQFSVALFPISWIYLSVMNYFRAVTRELKRLDSLSR 1108          
BLAST of mRNA_Ecto-sp13_S_contig13479.2769.1 vs. uniprot
Match: W7TMR9_9STRA (Multidrug resistance-associated protein 1 n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TMR9_9STRA)

HSP 1 Score: 132 bits (333), Expect = 5.260e-33
Identity = 70/152 (46.05%), Postives = 102/152 (67.11%), Query Frame = 0
Query:    1 VVSFWSSDPLYARHPLGFYLFGVTASAAVVGVFSHLRTMWAFYLGLGASKRLHGALLRRVLHAPVSFFDTTPVGRIIQRFSKDTDQVDQNLISQVAMVINGGLGVLAAGCAIIVATPVFAVILAPLSIVYIRVMNYFRHVAIELKRLESITK 152
            +++ W+SDPL+ + P   YL GV++ AA+V  F++LRT  +   G+ AS  LH   L++VL AP+ +FDTTP+G ++QRFS D DQVDQ L   + M I     ++    AI+ ATP F+V L P+S +Y+ VMNYFR V  ELKRL+S+++
Sbjct:  516 IIAAWTSDPLHIKRPARVYLLGVSSMAAMVAAFNYLRTYLSVLAGVRASDYLHHRALQKVLGAPMRYFDTTPLGSLVQRFSSDLDQVDQQLPGTLGMFITCVFQLVGTLGAILAATPQFSVALFPISWIYLSVMNYFRAVTRELKRLDSLSR 667          
BLAST of mRNA_Ecto-sp13_S_contig13479.2769.1 vs. uniprot
Match: A0A4D9CQY4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CQY4_9STRA)

HSP 1 Score: 132 bits (333), Expect = 5.390e-33
Identity = 70/152 (46.05%), Postives = 102/152 (67.11%), Query Frame = 0
Query:    1 VVSFWSSDPLYARHPLGFYLFGVTASAAVVGVFSHLRTMWAFYLGLGASKRLHGALLRRVLHAPVSFFDTTPVGRIIQRFSKDTDQVDQNLISQVAMVINGGLGVLAAGCAIIVATPVFAVILAPLSIVYIRVMNYFRHVAIELKRLESITK 152
            +++ W+SDPL+ + P   YL GV++ AA+V  F++LRT  +   G+ AS  LH   L++VL AP+ +FDTTP+G ++QRFS D DQVDQ L   + M I     ++    AI+ ATP F+V L P+S +Y+ VMNYFR V  ELKRL+S+++
Sbjct: 1041 IIAAWTSDPLHIKRPARVYLLGVSSMAAMVAAFNYLRTYLSVLAGVRASDYLHHRALQKVLGAPMRYFDTTPLGSLVQRFSSDLDQVDQQLPGTLGMFITCVFQLVGTLGAILAATPQFSVALFPISWIYLSVMNYFRAVTRELKRLDSLSR 1192          
BLAST of mRNA_Ecto-sp13_S_contig13479.2769.1 vs. uniprot
Match: A0A482UQK4_9ARCH (ATP-binding cassette domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482UQK4_9ARCH)

HSP 1 Score: 128 bits (321), Expect = 1.130e-31
Identity = 67/151 (44.37%), Postives = 100/151 (66.23%), Query Frame = 0
Query:    2 VSFWSSDPLYARHPLGFYLFGVTASAAVVGVFSHLRTMWAFYLGLGASKRLHGALLRRVLHAPVSFFDTTPVGRIIQRFSKDTDQVDQNLISQVAMVINGGLGVLAAGCAIIVATPVFAVILAPLSIVYIRVMNYFRHVAIELKRLESITK 152
            ++FW+SD  Y ++P GFY+    A    V +   +R +    +G+ AS+ LH  +L RVL AP +FFDTTP+GRI+ RFSKD D +D  LIS + M++     ++ +  AII ATP FA+I+ P+ ++Y+ +MNYFR+VA E KR ESI++
Sbjct:  157 ITFWTSDSSYIKNPRGFYMGIYVALGVAVAITGFVRVVSMAIMGIRASRSLHHDILERVLRAPQAFFDTTPLGRILARFSKDLDAIDNLLISNLGMLVMCIFFIIGSLGAIIFATPWFALIVVPVLVIYVLIMNYFRNVAREAKRYESISR 307          
BLAST of mRNA_Ecto-sp13_S_contig13479.2769.1 vs. uniprot
Match: A0A5A8DKQ7_CAFRO (Uncharacterized protein n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DKQ7_CAFRO)

HSP 1 Score: 125 bits (315), Expect = 1.420e-30
Identity = 69/152 (45.39%), Postives = 101/152 (66.45%), Query Frame = 0
Query:    2 VSFWSSDPLYARHPLGFYLFGVTASAAVVG-VFSHLRTMWAFYLGLGASKRLHGALLRRVLHAPVSFFDTTPVGRIIQRFSKDTDQVDQNLISQVAMVINGGLGVLAAGCAIIVATPVFAVILAPLSIVYIRVMNYFRHVAIELKRLESITK 152
            VSFW+SDP YA  P+G Y+ G+ A   V   V S +R ++    G+ ASK +H  L   V++AP+SFFDTTP+GR++ RFSKD D +D NL SQ+ M+      +L +  +II+ATP FAV + P+ +VY  +  YFR+V+ E KR++S+T+
Sbjct:  906 VSFWASDPFYALLPIGGYM-GIFAGIGVASAVISMIRLLFFVRAGITASKTMHDTLFSSVIYAPMSFFDTTPLGRVMARFSKDMDAIDFNLSSQLGMLAMTLFLILGSLISIIIATPWFAVAILPIMVVYWMISQYFRNVSRECKRVDSVTR 1056          
BLAST of mRNA_Ecto-sp13_S_contig13479.2769.1 vs. uniprot
Match: A0A7S1Z8T8_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1Z8T8_TRICV)

HSP 1 Score: 122 bits (306), Expect = 1.550e-30
Identity = 65/151 (43.05%), Postives = 92/151 (60.93%), Query Frame = 0
Query:    2 VSFWSSDPLYARHPLGFYLFGVTASAAVVGVFSHLRTMWAFYLGLGASKRLHGALLRRVLHAPVSFFDTTPVGRIIQRFSKDTDQVDQNLISQVAMVINGGLGVLAAGCAIIVATPVFAVILAPLSIVYIRVMNYFRHVAIELKRLESITK 152
            V+ W+SD  Y RH + FYL     +A ++GV + LR+      G+ AS +LH  +L  VL AP+SFFDTTP GRI+ RFSKD   +D+ L       +   L +L +   I   TP FA+++ PL  +Y RV+NYFR V+ E KRLES+++
Sbjct:  135 VTLWTSDATYQRHSMAFYLGFYFLTAVLLGVVTFLRSFLLARFGVKASTKLHNGILSSVLRAPMSFFDTTPTGRILSRFSKDVHSIDEELSEYFDFFLMCSLAILVSMGTISFVTPRFALLIPPLGFLYFRVLNYFRDVSRETKRLESVSR 285          
BLAST of mRNA_Ecto-sp13_S_contig13479.2769.1 vs. uniprot
Match: A0A7S2XSX4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XSX4_9STRA)

HSP 1 Score: 120 bits (302), Expect = 7.860e-29
Identity = 68/151 (45.03%), Postives = 94/151 (62.25%), Query Frame = 0
Query:    2 VSFWSSDPLYARHPLGFYLFGVTASAAVVGVFSHLRTMWAFYLGLGASKRLHGALLRRVLHAPVSFFDTTPVGRIIQRFSKDTDQVDQNLISQVAMVINGGLGVLAAGCAIIVATPVFAVILAPLSIVYIRVMNYFRHVAIELKRLESITK 152
            VS+W++D  Y+ +   FYL    A A  +G+ +  R+      G+ AS  LH  LLR VL+AP+SFFDTTP GRII RFSKD   +DQ L  Q+   +   + V+ +   I+  TP F V++ PL IVYI ++NYFR V+ E KRLESI++
Sbjct:  736 VSYWTTDTDYSNNSQAFYLGIYGAMAVSLGIITFARSFLLARFGVRASNSLHTNLLRSVLNAPMSFFDTTPTGRIISRFSKDMYAIDQELADQLDFFLMCSINVVVSLGTIVFVTPWFGVVVLPLMIVYIHLLNYFREVSRETKRLESISR 886          
BLAST of mRNA_Ecto-sp13_S_contig13479.2769.1 vs. uniprot
Match: A0A2R5GN95_9STRA (ABC transporter, putative n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GN95_9STRA)

HSP 1 Score: 119 bits (297), Expect = 3.730e-28
Identity = 63/151 (41.72%), Postives = 93/151 (61.59%), Query Frame = 0
Query:    2 VSFWSSDPLYARHPLGFYLFGVTASAAVVGVFSHLRTMWAFYLGLGASKRLHGALLRRVLHAPVSFFDTTPVGRIIQRFSKDTDQVDQNLISQVAMVINGGLGVLAAGCAIIVATPVFAVILAPLSIVYIRVMNYFRHVAIELKRLESITK 152
            VS WS D  Y    L FYL G    A ++ +FS++R++  FYL L AS++LH  LL  ++HAP+ FFDTTP+GR++ RFSKD    D  L   ++  +     VLA+   +  +TP+F   +  L I+Y+ VM  +R VA ++KRLESI++
Sbjct:  846 VSIWSEDTSYENRSLTFYLVGYAVVAFLLAIFSYIRSILVFYLALRASRQLHKDLLSSIMHAPMQFFDTTPIGRVLNRFSKDLYLADSQLPMSISFFLMMTFSVLASLATVGASTPLFFAAIPFLLIIYLAVMQRYRPVARDMKRLESISR 996          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13479.2769.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KK32_9PHAE2.590e-8899.34ABC protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0... [more]
A0A835YZ25_9STRA2.080e-4963.04Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
W7U3C1_9STRA5.250e-3346.05Multidrug resistance-associated protein 1 n=1 Tax=... [more]
W7TMR9_9STRA5.260e-3346.05Multidrug resistance-associated protein 1 n=2 Tax=... [more]
A0A4D9CQY4_9STRA5.390e-3346.05Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A482UQK4_9ARCH1.130e-3144.37ATP-binding cassette domain-containing protein (Fr... [more]
A0A5A8DKQ7_CAFRO1.420e-3045.39Uncharacterized protein n=3 Tax=Cafeteria roenberg... [more]
A0A7S1Z8T8_TRICV1.550e-3043.05Hypothetical protein (Fragment) n=1 Tax=Trieres ch... [more]
A0A7S2XSX4_9STRA7.860e-2945.03Hypothetical protein (Fragment) n=1 Tax=Attheya se... [more]
A0A2R5GN95_9STRA3.730e-2841.72ABC transporter, putative n=1 Tax=Hondaea fermenta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036640ABC transporter type 1, transmembrane domain superfamilyGENE3D1.20.1560.10coord: 8..151
e-value: 5.9E-22
score: 80.2
IPR036640ABC transporter type 1, transmembrane domain superfamilySUPERFAMILY90123ABC transporter transmembrane regioncoord: 11..150
IPR011527ABC transporter type 1, transmembrane domainPFAMPF00664ABC_membranecoord: 11..149
e-value: 1.4E-22
score: 80.7
IPR011527ABC transporter type 1, transmembrane domainPROSITEPS50929ABC_TM1Fcoord: 1..152
score: 23.098
NoneNo IPR availablePANTHERPTHR24223FAMILY NOT NAMEDcoord: 3..152
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 132..152
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 37..104
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..15
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 105..131
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 16..36
NoneNo IPR availableTMHMMTMhelixcoord: 102..124
NoneNo IPR availableTMHMMTMhelixcoord: 15..34

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13479contigEcto-sp13_S_contig13479:165..1200 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13479.2769.1mRNA_Ecto-sp13_S_contig13479.2769.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13479 165..1200 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13479.2769.1 ID=prot_Ecto-sp13_S_contig13479.2769.1|Name=mRNA_Ecto-sp13_S_contig13479.2769.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=153bp
VVSFWSSDPLYARHPLGFYLFGVTASAAVVGVFSHLRTMWAFYLGLGASK
RLHGALLRRVLHAPVSFFDTTPVGRIIQRFSKDTDQVDQNLISQVAMVIN
GGLGVLAAGCAIIVATPVFAVILAPLSIVYIRVMNYFRHVAIELKRLESI
TK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036640ABC1_TM_sf
IPR011527ABC1_TM_dom