prot_Ecto-sp13_S_contig13474.2767.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13474.2767.1
Unique Nameprot_Ecto-sp13_S_contig13474.2767.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length446
Homology
BLAST of mRNA_Ecto-sp13_S_contig13474.2767.1 vs. uniprot
Match: A0A6H5KR85_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR85_9PHAE)

HSP 1 Score: 749 bits (1935), Expect = 9.160e-267
Identity = 400/446 (89.69%), Postives = 412/446 (92.38%), Query Frame = 0
Query:    1 MGKVNKRQRKFLSKKVLTHRKKGGVRRDNKSKGKGAAATAATAPEASQAPGAQHRKTLPDGVDTAAFLECPWLSQEACAAAGRDACIAPFQPEVALLEGAPTSESGKRGGGGXXXXXXXXXXSSLTERVARAMIGRAVDERSLGDLLRVVWALQAIGDPSSAAVPTTSHQPLWAAPGSEAEDALISEASSRLHLAFRAHLGPERDEEDGSSVEEWEDAVRAHRQKLEKAEAWPRLGGALLSFLTSALDCVETEWATSISVAVEGRADSSKRGSSGATSVSFVDGLDRMRNHVPLLFPFPRLARRYLSFLLAVLQTSDSTPVLSLAFVRLYELSTSQPMPFLYDAFKGSYRCYRAAAERIGGGRGARVMARGDGAGSSLPLLRECLAELFGVEKPSAYLHAYVYIHELAREAVEAAAEVKKGGGKARDAGPALRRLRSWGFLQSLQV 446
            MGKVNKRQRKFLSKKVLTHRKKGGVRRDNKSKGKG    AATAPEASQAPGAQHRKTLPDGVDTAAFLECPWLS EACA AGRDAC+APF+PE ALLEGA  S+SGK+GGGG          SSLTE+ ARAMIGRAVDERSL DLLRVVWALQAIGDPSSAAVPTTSHQPL AAPGS+A DALISEASSRLHLAFRAHL P+RDEEDGSSVEEWED VRAHRQKLEKAEAWPRLGGALLSFLTSALDCVETEWATSISVAVEG ADSSK+GSS ATS S  DGLDRMRNHVPLLFPFPRLARRYLSFLLAVLQTSDST  LSLAFVRLYELSTSQPMPFL+DAFKGSYRCYRAAAERIGGGRGARVMARG+GAGSSLPLLRECLAELFGVEKPSAYLHAYVYIHELAREAV AAAEVKKGGG AR+AGPALRRLRSWGFLQSLQ+
Sbjct:    1 MGKVNKRQRKFLSKKVLTHRKKGGVRRDNKSKGKGVGGAAATAPEASQAPGAQHRKTLPDGVDTAAFLECPWLSPEACANAGRDACVAPFEPEAALLEGASPSKSGKQGGGGEGSVS-----SSLTEQAARAMIGRAVDERSLDDLLRVVWALQAIGDPSSAAVPTTSHQPLRAAPGSKAADALISEASSRLHLAFRAHLEPDRDEEDGSSVEEWEDTVRAHRQKLEKAEAWPRLGGALLSFLTSALDCVETEWATSISVAVEGCADSSKQGSSAATSASLEDGLDRMRNHVPLLFPFPRLARRYLSFLLAVLQTSDSTAALSLAFVRLYELSTSQPMPFLHDAFKGSYRCYRAAAERIGGGRGARVMARGEGAGSSLPLLRECLAELFGVEKPSAYLHAYVYIHELAREAVGAAAEVKKGGGMAREAGPALRRLRSWGFLQSLQL 441          
BLAST of mRNA_Ecto-sp13_S_contig13474.2767.1 vs. uniprot
Match: D8LEQ5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEQ5_ECTSI)

HSP 1 Score: 732 bits (1889), Expect = 2.360e-260
Identity = 395/450 (87.78%), Postives = 410/450 (91.11%), Query Frame = 0
Query:    1 MGKVNKRQRKFLSKKVLTHRKKGGVRRDNKSKGKGAAATAATAPEASQAPGAQHRKTLPDGVDTAAFLECPWLSQEACAAAGRDACIAPFQPEVALLEGAPTSESGKRGGGGXXXXXXXXXXSSLTERVARAMIGRAVDERSLGDLLRVVWALQ----AIGDPSSAAVPTTSHQPLWAAPGSEAEDALISEASSRLHLAFRAHLGPERDEEDGSSVEEWEDAVRAHRQKLEKAEAWPRLGGALLSFLTSALDCVETEWATSISVAVEGRADSSKRGSSGATSVSFVDGLDRMRNHVPLLFPFPRLARRYLSFLLAVLQTSDSTPVLSLAFVRLYELSTSQPMPFLYDAFKGSYRCYRAAAERIGGGRGARVMARGDGAGSSLPLLRECLAELFGVEKPSAYLHAYVYIHELAREAVEAAAEVKKGGGKARDAGPALRRLRSWGFLQSLQV 446
            MGKVNKRQRKFLSKKVLTHRKKGGVRRDNKSKG GAAA AATA EASQAPGAQHRKTLPDGVDTAAFLECPWLS+EACAAAGRDAC+APF+PEVALLEGA TS+ GKRGGG           SSLTE  ARAM+GRAVDERSL DLLRVVWALQ    A GDPSS A+PTT HQ L AAPGS+A  AL+SEASSRLHLAFRAHLGPERDEEDGSSVEEWEDAVRAHRQKLEKAEAWPRLGGALLSFLTSALD VETEWATS SVAVEGRADSSK+GSSGATS S VDGLDRMRNHVPLLFPFPRLARRYL+FLL VLQTSD+T  LSLAFVRLYELSTSQPMPFL+DAFKGSYRCYRAAAERIGGGRGA VMA+GDGAGSSLPLLRE  AELFGVEKPSAYLHAYVYIH+LAREAVEAAAEVKKGGGKARDAGPALRRLRSWGFLQSLQ+
Sbjct:    1 MGKVNKRQRKFLSKKVLTHRKKGGVRRDNKSKGNGAAAGAATALEASQAPGAQHRKTLPDGVDTAAFLECPWLSREACAAAGRDACVAPFEPEVALLEGAATSKRGKRGGGSKGSGS-----SSLTEEAARAMVGRAVDERSLDDLLRVVWALQEATTAAGDPSSPALPTTCHQALRAAPGSKAAGALVSEASSRLHLAFRAHLGPERDEEDGSSVEEWEDAVRAHRQKLEKAEAWPRLGGALLSFLTSALDSVETEWATSNSVAVEGRADSSKQGSSGATSASLVDGLDRMRNHVPLLFPFPRLARRYLAFLLDVLQTSDNTAALSLAFVRLYELSTSQPMPFLHDAFKGSYRCYRAAAERIGGGRGAGVMAKGDGAGSSLPLLREWFAELFGVEKPSAYLHAYVYIHDLAREAVEAAAEVKKGGGKARDAGPALRRLRSWGFLQSLQL 445          
BLAST of mRNA_Ecto-sp13_S_contig13474.2767.1 vs. uniprot
Match: A0A7S4MG20_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MG20_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 2.820e-12
Identity = 76/244 (31.15%), Postives = 116/244 (47.54%), Query Frame = 0
Query:  182 DALISEASSRLHLAFRAHL-------GPERDEEDGSSVE--EWEDAVRAHRQKLEKAEAWPRLGGALLSFLTSALDCVETEWATSISVAVEGRADSSKRGSSGATSVSFVDGLDRMRNHVPLLFPFPRLARRYLSFLL----AVLQTSDSTPVLSL-AFVRLYELSTSQPMPFLYDAFKGSYRCYRAAAERIGGGRGARVMARGDGAGSSLPLLR---ECLAELFGVEKPSAYLHAYVYIHELA 408
            D L+  A    H+ FR HL       G + D++D + V   E ++    + + L+++  W  L   L  FL S+L  +      ++                    +SFV  L  +  +VPLL PFP+LA+ +L  L     A L TS+   V+ L +F+R+ +L+ +QP PF+ D  K SY CY   A R   G  A V        S+LP L     C+ EL+ ++  S+Y HA+VYI +LA
Sbjct:  161 DRLMLVALRGCHVEFRRHLLGEETKKGGKGDKDDDADVTAPEIDENKPVNPKLLQRSGKWDELRTYLQLFLRSSLHLLSEAKEPAL--------------------LSFV--LKSLSPYVPLLTPFPKLAKSFLQTLSKLWSAPLDTSEEYQVVRLRSFLRVRQLAVTQPFPFVEDCLKSSYLCY---ARRAKFGTAASVH-------SALPTLTFMGNCVVELYSLDYASSYRHAFVYIRQLA 372          
BLAST of mRNA_Ecto-sp13_S_contig13474.2767.1 vs. uniprot
Match: D7G7J8_ECTSI (Nucleolar complex associated 2 homolog n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7J8_ECTSI)

HSP 1 Score: 60.1 bits (144), Expect = 6.400e-6
Identity = 43/139 (30.94%), Postives = 70/139 (50.36%), Query Frame = 0
Query:  285 LDRMRNHVPLLFPFPRLARRYLSFLLAVL----------------QTSDSTPVLSLAFVRLYELSTSQPMPFLYDAFKGSYRCYRAAAERIGGGRGARVMARGDGAGSSLPLLRECLAELFGVEKPSAYLHAYVYIHEL 407
            L R+ ++VPLL PFP LAR +L  LL +                 +  ++  V  LA++R+ +++ + P PF+    K   R Y A A+R      AR          SL ++  C+ EL+G++  SAY +A++YI +L
Sbjct:  459 LSRLEHYVPLLVPFPGLARGFLKTLLGLWGGAGAEAKSSGGGTEQEGEEAERVRLLAYLRVRQMAAALPFPFVEGCMK---RLYLAFAKR------ARAPPASQSGKVSLRVMEGCVVELYGMDVGSAYQNAFLYIRQL 588          
BLAST of mRNA_Ecto-sp13_S_contig13474.2767.1 vs. uniprot
Match: A0A485LS79_9STRA (Aste57867_25082 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LS79_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 4.040e-5
Identity = 50/162 (30.86%), Postives = 74/162 (45.68%), Query Frame = 0
Query:  291 HVPLLFPFP--RLARRYLSFLLAVLQTSDSTPVLSLAFVRLYELSTSQPMPFLYDAFKGSYRCYRAAAERIGGGRGARVMARGDGAGSSLPLLRECLAELFGVEKPSAYLHAYVYIHELA---REAVEA-AAEVKKGGGKARDAGPALRRLRSWGFLQSLQV 446
            H  L F  P  + AR+ L   + +   S  TPV  LAFVR+ EL+T  P PFL    K  Y  Y    +   G      +  G+           C+ EL+G++  S+Y H +VYI +LA   R+A+ A +A+  KG             + +W F+  L+V
Sbjct:  283 HAYLRFAAPCAQTARKLLKCCVNIWGKSLDTPVCLLAFVRIRELATLVPFPFLETCLKSVYLAYMRNVKFTNGVNFQHHIVMGN-----------CMVELYGLDLVSSYQHVFVYIRQLAMTIRKAIAAPSADTLKG-------------ILTWRFVNCLKV 420          
BLAST of mRNA_Ecto-sp13_S_contig13474.2767.1 vs. uniprot
Match: W9S139_9ROSA (Uncharacterized protein n=2 Tax=Morus notabilis TaxID=981085 RepID=W9S139_9ROSA)

HSP 1 Score: 57.0 bits (136), Expect = 5.960e-5
Identity = 50/163 (30.67%), Postives = 73/163 (44.79%), Query Frame = 0
Query:  285 LDRMRNHVPLLFPFPRLARRYLSFLLAVLQTSDST-PVLSLAFVRLYELSTSQPMPFLYDAFKGSYRCYRAAAERIGGGRGARVMARGDGAGSSLPLLRECLAELFGVEKPSAYLHAYVYIHELAREAVEAAAEVKKGGGKARDAGPALRRLRSWGFLQSLQV 446
            L R++     L  FP L R+Y+   L    T     PV+SL F+R  +L        L + FKG Y+ Y    + I   +   +             L+ C+ ELFGVE P+AY HA+V+I +LA    EA     K          A R++  W F+ SL++
Sbjct:  286 LRRLKFSSIFLAAFPSLLRKYVKVALHFWGTGGGALPVVSLLFLR--DLCIRLGADCLDECFKGIYKAYVLNCQFINALKLQHIQ-----------FLQNCVIELFGVEIPTAYQHAFVFIRQLAMILREALNTKTK---------EAFRKVYEWKFMNSLEL 426          
BLAST of mRNA_Ecto-sp13_S_contig13474.2767.1 vs. uniprot
Match: A0A024TZA1_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TZA1_9STRA)

HSP 1 Score: 56.2 bits (134), Expect = 9.280e-5
Identity = 46/154 (29.87%), Postives = 72/154 (46.75%), Query Frame = 0
Query:  297 PFPRLARRYLSFLLAVLQTSDSTPVLSLAFVRLYELSTSQPMPFLYDAFKGSYRCYRAAAERIGGGRGARVMARGDGAGSSLPLLRECLAELFGVEKPSAYLHAYVYIHELA---REAVEA-AAEVKKGGGKARDAGPALRRLRSWGFLQSLQV 446
            P  + +R+ L   ++V   S  T V  LAFVR+ EL+T  P PFL    K  Y  Y    +   G      +  G+           C+ EL+G++  S+Y H ++YI +LA   R+A+ A +A+V KG             + +W F+  L+V
Sbjct:  285 PCLKTSRKLLKCFVSVWGKSLDTTVCMLAFVRIRELATLVPFPFLETCLKALYLAYMRNVKFTNGVNFQHHIVMGN-----------CMVELYGLDLVSSYQHVFIYIRQLAMTIRKAIAAPSADVLKG-------------ILTWRFVNCLKV 414          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13474.2767.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A6H5KR85_9PHAE9.160e-26789.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LEQ5_ECTSI2.360e-26087.78Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S4MG20_9STRA2.820e-1231.15Hypothetical protein (Fragment) n=1 Tax=Odontella ... [more]
D7G7J8_ECTSI6.400e-630.94Nucleolar complex associated 2 homolog n=2 Tax=Ect... [more]
A0A485LS79_9STRA4.040e-530.86Aste57867_25082 protein n=1 Tax=Aphanomyces stella... [more]
W9S139_9ROSA5.960e-530.67Uncharacterized protein n=2 Tax=Morus notabilis Ta... [more]
A0A024TZA1_9STRA9.280e-529.87Uncharacterized protein n=2 Tax=Aphanomyces invada... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 212..232
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 35..43
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..34
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 49..446
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 44..48
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..48

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13474contigEcto-sp13_S_contig13474:2407..4352 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13474.2767.1mRNA_Ecto-sp13_S_contig13474.2767.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13474 2407..4352 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13474.2767.1 ID=prot_Ecto-sp13_S_contig13474.2767.1|Name=mRNA_Ecto-sp13_S_contig13474.2767.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=446bp
MGKVNKRQRKFLSKKVLTHRKKGGVRRDNKSKGKGAAATAATAPEASQAP
GAQHRKTLPDGVDTAAFLECPWLSQEACAAAGRDACIAPFQPEVALLEGA
PTSESGKRGGGGKGSGSKGSGSSSLTERVARAMIGRAVDERSLGDLLRVV
WALQAIGDPSSAAVPTTSHQPLWAAPGSEAEDALISEASSRLHLAFRAHL
GPERDEEDGSSVEEWEDAVRAHRQKLEKAEAWPRLGGALLSFLTSALDCV
ETEWATSISVAVEGRADSSKRGSSGATSVSFVDGLDRMRNHVPLLFPFPR
LARRYLSFLLAVLQTSDSTPVLSLAFVRLYELSTSQPMPFLYDAFKGSYR
CYRAAAERIGGGRGARVMARGDGAGSSLPLLRECLAELFGVEKPSAYLHA
YVYIHELAREAVEAAAEVKKGGGKARDAGPALRRLRSWGFLQSLQV
back to top