prot_Ecto-sp13_S_contig1346.2759.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig1346.2759.1
Unique Name	prot_Ecto-sp13_S_contig1346.2759.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	391

Homology

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BLAST of mRNA_Ecto-sp13_S_contig1346.2759.1 vs. uniprot
Match: A0A6H5KJU6_9PHAE (MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJU6_9PHAE)

HSP 1 Score: 467 bits (1201), Expect = 1.980e-157
Identity = 250/307 (81.43%), Postives = 253/307 (82.41%), Query Frame = 0

Query:    1 MKLATAPFKNWGVLSQSMSGRTSKQCRERWCHHLDPSINKGAYTEEEDSIIIETQAKLGNRWSQIAARLPGRTENSIKIRCKALQRKVLSGSPSSGGGRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCSSFESGLDTMAEQPPLAPLAVPPRAPLPLEQHPPVHFSRGMHFELGGGG-GVPLPPAGAPPCHGNSMFFGPGPAAPAPGYAMPRAGLEQGWFEPKQDAVHQFLLQXXXXXXXXXXGSGSVKVEGGLCGLALDRHHHQLQQQKYVPQSEQLVDVIPASQSFPSAVNIDG 306
            MKLATAPFKNWGVLSQSMSGRTSKQCRERWCHHLDPSINKGAYTEEED IIIETQAKLGNRWSQIAARLPGRTENSIKIRCKALQRKVLSGSPSSGG RS                                      CSSFESGLDTMAEQPPLAPLAVPPRAPL  EQHPPVHFSRGMHF+LGGGG GVPLPPAGAPPCHGNS+F GPGPAAPAPGYAMPRAGLEQGWFEPKQDA HQFLL XXXXXXXX  GSGS KVEGGLC LALDR HH LQQQKYVPQ EQLVDVIPASQ FPSA+NIDG
Sbjct:  177 MKLATAPFKNWGVLSQSMSGRTSKQCRERWCHHLDPSINKGAYTEEEDKIIIETQAKLGNRWSQIAARLPGRTENSIKIRCKALQRKVLSGSPSSGG-RSGSTSSPAGRAPKKSTGTSTTARQSRELSSSSSLSASESCSSFESGLDTMAEQPPLAPLAVPPRAPLLPEQHPPVHFSRGMHFKLGGGGDGVPLPPAGAPPCHGNSVFSGPGPAAPAPGYAMPRAGLEQGWFEPKQDAAHQFLLLXXXXXXXXPLGSGSAKVEGGLCALALDRQHHLLQQQKYVPQPEQLVDVIPASQPFPSAINIDG 482

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BLAST of mRNA_Ecto-sp13_S_contig1346.2759.1 vs. uniprot
Match: D8LM16_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM16_ECTSI)

HSP 1 Score: 181 bits (459), Expect = 1.300e-50
Identity = 85/87 (97.70%), Postives = 87/87 (100.00%), Query Frame = 0

Query:    1 MKLATAPFKNWGVLSQSMSGRTSKQCRERWCHHLDPSINKGAYTEEEDSIIIETQAKLGNRWSQIAARLPGRTENSIKIRCKALQRK 87
            MKLATAPFKNWGVLSQSMSGRTSKQCRERWCHHLDPSINKGAYTEEED+IIIETQA+LGNRWSQIAARLPGRTENSIKIRCKALQRK
Sbjct:  170 MKLATAPFKNWGVLSQSMSGRTSKQCRERWCHHLDPSINKGAYTEEEDNIIIETQAELGNRWSQIAARLPGRTENSIKIRCKALQRK 256

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BLAST of mRNA_Ecto-sp13_S_contig1346.2759.1 vs. uniprot
Match: A0A7S2UU49_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UU49_9STRA)

HSP 1 Score: 124 bits (312), Expect = 9.650e-29
Identity = 58/93 (62.37%), Postives = 71/93 (76.34%), Query Frame = 0

Query:    8 FKNWGVLSQSMSGRTSKQCRERWCHHLDPSINKGAYTEEEDSIIIETQAKLGNRWSQIAARLPGRTENSIKIRCKALQRKVLSGSPSSGGGRS 100
            FKNWG L+  M GRTSKQCRERW HHLDPS+ KG YT EED+ I+  Q++LGN+WS+IA  LPGRTEN++KIR KAL R  L  +  SG G++
Sbjct:   98 FKNWGQLAAQMPGRTSKQCRERWSHHLDPSVKKGEYTTEEDNTILRLQSELGNKWSEIAKHLPGRTENAVKIRWKALDR--LRQNAGSGRGQA 188

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BLAST of mRNA_Ecto-sp13_S_contig1346.2759.1 vs. uniprot
Match: A0A7S2UZV2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZV2_9STRA)

HSP 1 Score: 123 bits (308), Expect = 4.440e-28
Identity = 55/86 (63.95%), Postives = 68/86 (79.07%), Query Frame = 0

Query:    9 KNWGVLSQSMSGRTSKQCRERWCHHLDPSINKGAYTEEEDSIIIETQAKLGNRWSQIAARLPGRTENSIKIRCKALQRKVLSGSPS 94
            KNWG L++ M GRTSKQCRERW HHLDP++ KG YT EED+ I++ QA LGN+WS+IA ++PGRTEN++KIR KAL R   S S S
Sbjct:    1 KNWGQLAEQMPGRTSKQCRERWNHHLDPTVKKGEYTAEEDAAILQLQASLGNKWSEIAKQIPGRTENAVKIRWKALDRIRRSASHS 86

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BLAST of mRNA_Ecto-sp13_S_contig1346.2759.1 vs. uniprot
Match: A0A835Z1Q6_9STRA (Homeodomain-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1Q6_9STRA)

HSP 1 Score: 114 bits (286), Expect = 5.030e-28
Identity = 51/73 (69.86%), Postives = 58/73 (79.45%), Query Frame = 0

Query:    8 FKNWGVLSQSMSGRTSKQCRERWCHHLDPSINKGAYTEEEDSIIIETQAKLGNRWSQIAARLPGRTENSIKIR 80
            +KNWG L+  M GRTSKQCRERW HHLDP+INK  YT EED+ I+  Q  LGN+WSQIA  LPGRTEN+IKIR
Sbjct:    5 YKNWGQLAAHMPGRTSKQCRERWIHHLDPAINKSDYTAEEDAKILALQKDLGNKWSQIALHLPGRTENAIKIR 77

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BLAST of mRNA_Ecto-sp13_S_contig1346.2759.1 vs. uniprot
Match: K3X9M2_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X9M2_GLOUD)

HSP 1 Score: 125 bits (315), Expect = 1.010e-27
Identity = 57/85 (67.06%), Postives = 70/85 (82.35%), Query Frame = 0

Query:    2 KLATAPFKNWGVLSQSMSGRTSKQCRERWCHHLDPSINKGAYTEEEDSIIIETQAKLGNRWSQIAARLPGRTENSIKIRCKALQR 86
            +L T   KNWG ++  + GRTSKQCRERWC+HLDP+INKG+YTE+ED IIIE QAKLGNRWS IA +L GRTE+++KIR K+L R
Sbjct:  303 ELVTEEKKNWGQVASLIPGRTSKQCRERWCNHLDPNINKGSYTEDEDKIIIEMQAKLGNRWSIIAQQLKGRTEDAVKIRWKSLMR 387

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BLAST of mRNA_Ecto-sp13_S_contig1346.2759.1 vs. uniprot
Match: F0W430_9STRA (Myblike DNAbinding protein putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W430_9STRA)

HSP 1 Score: 124 bits (312), Expect = 1.500e-27
Identity = 56/83 (67.47%), Postives = 69/83 (83.13%), Query Frame = 0

Query:    8 FKNWGVLSQSMSGRTSKQCRERWCHHLDPSINKGAYTEEEDSIIIETQAKLGNRWSQIAARLPGRTENSIKIRCKALQRKVLS 90
             +NWG ++  + GRTSKQCRERWC+HLDPSINKG+Y+EEED II+E QAKLGNRWS IA  L GRTE+++KIR K+L+R  LS
Sbjct:  192 IRNWGHVASMIPGRTSKQCRERWCNHLDPSINKGSYSEEEDRIILEMQAKLGNRWSVIAQHLKGRTEDAVKIRWKSLKRGHLS 274

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BLAST of mRNA_Ecto-sp13_S_contig1346.2759.1 vs. uniprot
Match: A0A1V9ZGQ2_9STRA (Myb-like DNA-binding protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZGQ2_9STRA)

HSP 1 Score: 122 bits (307), Expect = 6.260e-27
Identity = 54/78 (69.23%), Postives = 67/78 (85.90%), Query Frame = 0

Query:    9 KNWGVLSQSMSGRTSKQCRERWCHHLDPSINKGAYTEEEDSIIIETQAKLGNRWSQIAARLPGRTENSIKIRCKALQR 86
            KNWG ++  ++GRTSKQCRERWC+HLDP+INKG YT+EED +II+ QAKLGNRWS IA RL GRTE+++KIR K+L R
Sbjct:  159 KNWGQVAAQIAGRTSKQCRERWCNHLDPNINKGNYTKEEDDLIIDMQAKLGNRWSVIAQRLVGRTEDAVKIRWKSLMR 236

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BLAST of mRNA_Ecto-sp13_S_contig1346.2759.1 vs. uniprot
Match: T0PUB4_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0PUB4_SAPDV)

HSP 1 Score: 122 bits (307), Expect = 7.690e-27
Identity = 54/78 (69.23%), Postives = 67/78 (85.90%), Query Frame = 0

Query:    9 KNWGVLSQSMSGRTSKQCRERWCHHLDPSINKGAYTEEEDSIIIETQAKLGNRWSQIAARLPGRTENSIKIRCKALQR 86
            KNWG ++  ++GRTSKQCRERWC+HLDP+INKG YT+EED +II+ QAKLGNRWS IA RL GRTE+++KIR K+L R
Sbjct:  178 KNWGQVAAQIAGRTSKQCRERWCNHLDPNINKGNYTKEEDDLIIDMQAKLGNRWSVIAQRLVGRTEDAVKIRWKSLMR 255

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BLAST of mRNA_Ecto-sp13_S_contig1346.2759.1 vs. uniprot
Match: A0A833VTS6_PHYIN (Myb-like DNA-binding domain n=2 Tax=Phytophthora TaxID=4783 RepID=A0A833VTS6_PHYIN)

HSP 1 Score: 123 bits (308), Expect = 7.870e-27
Identity = 54/78 (69.23%), Postives = 67/78 (85.90%), Query Frame = 0

Query:    9 KNWGVLSQSMSGRTSKQCRERWCHHLDPSINKGAYTEEEDSIIIETQAKLGNRWSQIAARLPGRTENSIKIRCKALQR 86
            KNWG ++  + GRTSKQCRERWC+HLDP+INKG+YTE+ED II+E QAKLGNRWS IA +L GRTE+++KIR K+L R
Sbjct:  241 KNWGQVASLIPGRTSKQCRERWCNHLDPNINKGSYTEDEDKIIVEMQAKLGNRWSIIAQQLKGRTEDAVKIRWKSLMR 318

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig1346.2759.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig1346.2759.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KJU6_9PHAE	1.980e-157	81.43	MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta...	[more]
D8LM16_ECTSI	1.300e-50	97.70	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A7S2UU49_9STRA	9.650e-29	62.37	Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa...	[more]
A0A7S2UZV2_9STRA	4.440e-28	63.95	Hypothetical protein n=1 Tax=Fibrocapsa japonica T...	[more]
A0A835Z1Q6_9STRA	5.030e-28	69.86	Homeodomain-like protein (Fragment) n=1 Tax=Tribon...	[more]
K3X9M2_GLOUD	1.010e-27	67.06	Uncharacterized protein n=1 Tax=Globisporangium ul...	[more]
F0W430_9STRA	1.500e-27	67.47	Myblike DNAbinding protein putative n=1 Tax=Albugo...	[more]
A0A1V9ZGQ2_9STRA	6.260e-27	69.23	Myb-like DNA-binding protein n=1 Tax=Thraustotheca...	[more]
T0PUB4_SAPDV	7.690e-27	69.23	Uncharacterized protein n=2 Tax=Saprolegnia TaxID=...	[more]
A0A833VTS6_PHYIN	7.870e-27	69.23	Myb-like DNA-binding domain n=2 Tax=Phytophthora T...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 39..87 e-value: 1.3E-11 score: 54.6
IPR001005	SANT/Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 40..80 e-value: 8.6E-11 score: 41.9
None	No IPR available	GENE3D	1.10.10.60		coord: 4..40 e-value: 1.3E-11 score: 46.3
None	No IPR available	GENE3D	1.10.10.60		coord: 42..95 e-value: 1.1E-13 score: 52.8
IPR015495	Myb-like transcription factor	PANTHER	PTHR45614	FAMILY NOT NAMED	coord: 9..243
IPR017877	Myb-like domain	PROSITE	PS50090	MYB_LIKE	coord: 1..34 score: 6.458
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 35..89 score: 19.217
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 14..90

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig1346	contig	Ecto-sp13_S_contig1346:14160..16461 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig1346.2759.1	mRNA_Ecto-sp13_S_contig1346.2759.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig1346 10865..16520 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig1346.2759.1 ID=prot_Ecto-sp13_S_contig1346.2759.1|Name=mRNA_Ecto-sp13_S_contig1346.2759.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=391bp
MKLATAPFKNWGVLSQSMSGRTSKQCRERWCHHLDPSINKGAYTEEEDSI
IIETQAKLGNRWSQIAARLPGRTENSIKIRCKALQRKVLSGSPSSGGGRS
GSTSSPAGRAPKKSTGTSTTARQSRELSSSSSSSASVSCSSFESGLDTMA
EQPPLAPLAVPPRAPLPLEQHPPVHFSRGMHFELGGGGGVPLPPAGAPPC
HGNSMFFGPGPAAPAPGYAMPRAGLEQGWFEPKQDAVHQFLLQQQQQQQQ
QPPGSGSVKVEGGLCGLALDRHHHQLQQQKYVPQSEQLVDVIPASQSFPS
AVNIDGGGGGGGGGGGGGGGGCSPTAAACPPPKEGSWFNPSTSMPNRPPS
CTSISRARFHKRGSSSSMERRTPTTALSSSSSSNSSRRKE*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001005	SANT/Myb
IPR015495	Myb-like_TF
IPR017877	Myb-like_dom
IPR017930	Myb_dom
IPR009057	Homeobox-like_sf