mRNA_Ecto-sp13_S_contig13392.2713.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig13392.2713.1
Unique NamemRNA_Ecto-sp13_S_contig13392.2713.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig13392.2713.1 vs. uniprot
Match: D7FYS5_ECTSI (THUMP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYS5_ECTSI)

HSP 1 Score: 939 bits (2426), Expect = 0.000e+0
Identity = 489/536 (91.23%), Postives = 501/536 (93.47%), Query Frame = 1
Query:  256 SLDITKSPRQAAESTGTSAPQQMASGEAPAEEPNKTEASLARLESLVTDSPRWPAAINVWKRFKVSQARSTEAAATGAGDVSGTEPRDCPALGWPGQEGEDAPRPVGDIDVTSLKFRASVVRDGQHPFSSVEASPRLGGAVWSVNRGWTVDLKGYDVEVVAFILERGVAVGLALDGDRTKRCSHGRVPKEDKGFIETGKRMSSLRPSTAYLMLRMAEPVVGDVIVDCMCGVGTIPFLGADWFPGVCLVGGEIDDSAIDHLRRNAQSLRRSPAGRAGAAGGACAWDAQSLPLRDGSVDAMVVDMPFGQSCGTPRQNAKLYPLVMAEMARVLRPSGRAVLLVTQPHLLGVPGLRRDNQKDRKKLRKMAKQASRVDDRGHRDLGGDIEGRAAPEETGSGERCGESTSRQAGSINCSSDGGMSKDVASTVGHGVENVTKREKEDVDPSVSGARASPAPEKGKSDFPLRDSERGV--AAAAPGAMWRIRARHAVNVGGLISHLLLLDRTDEPPRSSRVDRRRRVVGPKAYCKRHHGGGTVS 1857
            SLDIT+SPRQAAEST TS+PQ++ASG APAE PN TEA+LARLESLVTDSP WPAAINVWKRFKVSQARST+AAA GAG VSGTEPRDCPALG PGQE EDAPRPVGDIDV  LKFRASVVRDGQHPFSSVEASPRLGGAVWSVNRGWTVDLKGYDVEVVAFILERGVAVGLALDGDRTKRCSHGRVPKEDKGFIETGKRMSSLRPSTAYLMLRMAEPVVGDVIVDCMCGVGTIPFLGA WFPGVCLVGGEIDDSAIDHLRRNAQSLRRSPAGRAGAAGGACAWDAQSLPLRDGSVDAMVVDMPFGQSCGTPRQNA+LYPLVMAEMARVLRPSGRAVLLVTQPHLLGVPGLRRDNQKDRKKLRKMAKQASRV DRG  DLG  IEGRAA EETGSGERCGESTSR AG+IN SSDGGMSKD+A T GHGVENVTK+EKEDVDPS SG  ASPAPEKG +DFPL DSER V  AAAAPGA+WRIRARHAVNVGGLISHLLLLDRTDEPPRS RVDRR RVVG KAYCKRHH GG VS
Sbjct:   14 SLDITRSPRQAAESTATSSPQKIASGAAPAEGPNTTEAALARLESLVTDSPLWPAAINVWKRFKVSQARSTQAAAAGAGGVSGTEPRDCPALGRPGQEMEDAPRPVGDIDVAGLKFRASVVRDGQHPFSSVEASPRLGGAVWSVNRGWTVDLKGYDVEVVAFILERGVAVGLALDGDRTKRCSHGRVPKEDKGFIETGKRMSSLRPSTAYLMLRMAEPVVGDVIVDCMCGVGTIPFLGAGWFPGVCLVGGEIDDSAIDHLRRNAQSLRRSPAGRAGAAGGACAWDAQSLPLRDGSVDAMVVDMPFGQSCGTPRQNARLYPLVMAEMARVLRPSGRAVLLVTQPHLLGVPGLRRDNQKDRKKLRKMAKQASRVGDRGDHDLGEGIEGRAASEETGSGERCGESTSRHAGNINSSSDGGMSKDIADTAGHGVENVTKQEKEDVDPSDSGELASPAPEKGTNDFPLCDSERSVCVAAAAPGALWRIRARHAVNVGGLISHLLLLDRTDEPPRSPRVDRRHRVVGAKAYCKRHHEGGAVS 549          
BLAST of mRNA_Ecto-sp13_S_contig13392.2713.1 vs. uniprot
Match: A0A6H5KWC7_9PHAE (UPF0020 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWC7_9PHAE)

HSP 1 Score: 530 bits (1365), Expect = 8.240e-184
Identity = 279/308 (90.58%), Postives = 283/308 (91.88%), Query Frame = 1
Query:  937 MCGVGTIPFLGADWFPGVCLVGGEIDDSAIDHLRRNAQSLRRSPAGRAGAAGGACAWDAQSLPLRDGSVDAMVVDMPFGQSCGTPRQNAKLYPLVMAEMARVLRPSGRAVLLVTQPHLLGVPGLRRDNQKDRKKLRKMAKQASRVDDRGHRDLGGDIEGRAAPEETGSGERCGESTSRQAGSINCSSDGGMSKDVASTVGHGVENVTKREKEDVDPSVSGARASPAPEKGKSDFPLRDSERGVAAAAPGAMWRIRARHAVNVGGLISHLLLLDRTDEPPRSSRVDRRRRVVGPKAYCKRHHGGGTVSS 1860
            MCGVGTIP LGA WFPGVCLVGGEIDDSAIDHLRRNAQSLRRSPAGRAGAAGGACAWDAQSLPLRDGSVDAMVVDMPFGQSCGTPRQNA+LYPLVMAEMARVLRPSGRAVLLVTQPHLLGV GLRRDNQKDRKKLRKMA Q SRV DRGH DLGG IEGRAAPEE G GER GESTS+QAGSIN SSDGGMSKDVA T+GHGVENVTKREKEDVDPS SG RASPAPEKGK   PL DSERG AAAAPGA+WRIRARHAVNVGGLISHLLLLDRTDEPPRS RVDRR RVVG KAYCKRHH GG VSS
Sbjct:    1 MCGVGTIPLLGAGWFPGVCLVGGEIDDSAIDHLRRNAQSLRRSPAGRAGAAGGACAWDAQSLPLRDGSVDAMVVDMPFGQSCGTPRQNARLYPLVMAEMARVLRPSGRAVLLVTQPHLLGVSGLRRDNQKDRKKLRKMATQESRVGDRGHHDLGGVIEGRAAPEEIGLGERYGESTSQQAGSINSSSDGGMSKDVAGTMGHGVENVTKREKEDVDPSDSGDRASPAPEKGKHGCPLGDSERGGAAAAPGALWRIRARHAVNVGGLISHLLLLDRTDEPPRSPRVDRRYRVVGAKAYCKRHHEGGAVSS 308          
BLAST of mRNA_Ecto-sp13_S_contig13392.2713.1 vs. uniprot
Match: A0A6H5KUR7_9PHAE (THUMP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUR7_9PHAE)

HSP 1 Score: 483 bits (1243), Expect = 8.830e-165
Identity = 263/325 (80.92%), Postives = 277/325 (85.23%), Query Frame = 1
Query:    1 YLLLCLGGLQTAVKAEVRRHLEASRQEGDIYVFEEDFGGA-----------PDQVEGVHSG---QAGCGKLLVATDAPPETLRSLRCVQGLFALVAHSASLDITKSPRQAAESTGTSAPQQMASGEAPAEEPNKTEASLARLESLVTDSPRWPAAINVWKRFKVSQARSTEAAATGAGDVSGTEPRDCPALGWPGQEGEDAPRPVGDIDVTSLKFRASVVRDGQHPFSSVEASPRLGGAVWSVNRGWTVDLKGYDVEVVAFILERGVAVGLALDGDRTKRCSHGRVPKEDKGFIETGKRMSSLRPSTAYLMLRMAEPVVGDVIVD 933
            YLLLCLGGLQT VKAEV+RHLEASRQEGD++VFEEDFG             P +   +  G   +A  G    A D  PE + SLR V GLFALVAHSASLDIT+ PRQAAEST TS+PQ++ASG APAE+PN TEA+LARLESLVTDSP WPAAINVWK FKVSQARSTEAAA GAGDVSGTEPRDCPALG PGQE EDAPR VGDIDV  +KFRASVVRDGQHPFSSVEASPRLGGAVWSVNRGWTVDLKGYDVEVVAFILERGVAVGLALDGDRTKRCSHGRVPKEDKGFIETGKRMSSLRPSTAYLMLRMAEPVVGDVIVD
Sbjct:   21 YLLLCLGGLQTVVKAEVKRHLEASRQEGDVHVFEEDFGATHYVMTKTRSARPSRRGSLRPGGLREAAGGDRCSARD--PE-IASLRPVTGLFALVAHSASLDITRIPRQAAESTSTSSPQKIASGAAPAEDPNTTEAALARLESLVTDSPLWPAAINVWKSFKVSQARSTEAAAAGAGDVSGTEPRDCPALGEPGQEEEDAPRAVGDIDVAGIKFRASVVRDGQHPFSSVEASPRLGGAVWSVNRGWTVDLKGYDVEVVAFILERGVAVGLALDGDRTKRCSHGRVPKEDKGFIETGKRMSSLRPSTAYLMLRMAEPVVGDVIVD 342          
BLAST of mRNA_Ecto-sp13_S_contig13392.2713.1 vs. uniprot
Match: A0A485LJ24_9STRA (Aste57867_20172 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LJ24_9STRA)

HSP 1 Score: 190 bits (482), Expect = 8.160e-51
Identity = 105/235 (44.68%), Postives = 140/235 (59.57%), Query Frame = 1
Query:  589 TSLKFRASVVRDGQHPFSSVEASPRLGGAVWSVNRGWTVDLKGYDVEVVAFILERGVAVGLALDGDRTKRCSHGRVPKEDKGFIETGKRMSSLRPSTAYLMLRMAEPVVGDVIVDCMCGVGTIPFLGADWFPGVCLVGGEIDDSAIDHLRRNAQSLRRSPAGRAGAAGGACAWDAQSLPLRDGSVDAMVVDMPFGQSCGTPRQNAKLYPLVMAEMARVLRPSGRAVLLVTQPHLL 1293
            +S++FRAS VRDG+H +SS   + ++G AV +   G+ V L  +D+EVV  ++   V +GL+L  D       G     ++  I T K MS+LRPSTAYLML++AE  +GD+++DCMCGVGT+P     W P V   GG+I   A+     N Q  R +           C W +  LP+R  +VD ++VDMPFG  CG   QNAKLYP  + EMARVLRP GRAVLLV    LL
Sbjct:  127 SSVRFRASCVRDGKHAYSSETIAGKVGAAVVA-KFGYGVSLAAFDLEVVCLVMHHHVVLGLSLADDPEAINFRGSRLAPERRRIPTMKYMSTLRPSTAYLMLQLAECSIGDIVLDCMCGVGTLPASSVFWAPVVAF-GGDISTDAVAQANTNFQGQRAN----------VCQWSSAHLPVRSNAVDCVLVDMPFGLLCGNSTQNAKLYPKAIKEMARVLRPGGRAVLLVMSKKLL 349          
BLAST of mRNA_Ecto-sp13_S_contig13392.2713.1 vs. uniprot
Match: A0A024TEQ6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TEQ6_9STRA)

HSP 1 Score: 190 bits (482), Expect = 1.290e-50
Identity = 114/312 (36.54%), Postives = 158/312 (50.64%), Query Frame = 1
Query:  361 TEASLARLESLVTDSPRWPAAINVWKRFKVSQARSTEAAATGAGDVSGTEPRDCPALGWPGQEGEDAPRPVGDIDVTSLKFRASVVRDGQHPFSSVEASPRLGGAVWSVNRGWTVDLKGYDVEVVAFILERGVAVGLAL-DGDRTKRCSHGRVPKEDKGFIETGKRMSSLRPSTAYLMLRMAEPVVGDVIVDCMCGVGTIPFLGADWFPGVCLVGGEIDDSAIDHLRRNAQSLRRSPAGRAGAAGGACAWDAQSLPLRDGSVDAMVVDMPFGQSCGTPRQNAKLYPLVMAEMARVLRPSGRAVLLVTQPHLL 1293
            T A LA++ +LV  +P W  ++ VW+  + + A                                             L+FRAS VRDG+H +SS   +  +G AV     GWTV L  ++VEVVA +L   V +GL+L +  +T     GR+  E          +S+LRPSTAY+ML++A+   GDV++DCMCGVGT+P     W P V  +GG++   AI     N +  R +           C W A+ LPLR  SVD ++VDMPFG  CG P +NA+LYP  + +MARVLRP G AVLL     L+
Sbjct:   90 TPAGLAQIGALVEHAPVWKDSVAVWRSGRENAATD------------------------------------------GLRFRASCVRDGKHAYSSETIAGEVGAAVLKRQTGWTVSLVDFNVEVVALVLHHHVVLGLSLAENSKTVNFRGGRLAPEPCRLASLD-YISTLRPSTAYMMLQLAKCDAGDVVLDCMCGVGTLPACAVLWGPSVFGIGGDVSSEAIAQAHVNFKCHRAA----------ICQWSAEKLPLRPNSVDRILVDMPFGMRCGNPVKNARLYPKAIGDMARVLRPGGVAVLLAMSKKLV 348          
BLAST of mRNA_Ecto-sp13_S_contig13392.2713.1 vs. uniprot
Match: W4FQN6_9STRA (UPF0020 domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FQN6_9STRA)

HSP 1 Score: 186 bits (473), Expect = 3.190e-49
Identity = 131/386 (33.94%), Postives = 187/386 (48.45%), Query Frame = 1
Query:  139 VHSGQAGCGKLLVATDAPPETLRSLRCVQGLFALVAHSASLDITKSPRQAAESTGTSAPQQMASGEAPAEEPNKTEASLARLESLVTDSPRWPAAINVWKRFKVSQARSTEAAATGAGDVSGTEPRDCPALGWPGQEGEDAPRPVGDIDVTSLKFRASVVRDGQHPFSSVEASPRLGGAVWSVNRGWTVDLKGYDVEVVAFILERGVAVGLAL-DGDRTKRCSHGRVPKEDKGFIETGKRMSSLRPSTAYLMLRMAEPVVGDVIVDCMCGVGTIPFLGADWFPGVCLVGGEIDDSAIDHLRRNAQSLRRSPAGRAGAAGGACAWDAQSLPLRDGSVDAMVVDMPFGQSCGTPRQNAKLYPLVMAEMARVLRPSGRAVLLVTQPHLL 1293
            V  G+A  GKLL+ T +    ++SL  +Q   A + H+A +           +T TSA                    L ++  LV  +  W AA+ +WK         +                            EDAP        ++L+FR S VRDG+H +SS   +  +G AV +++  WTV L  +DVEVVA ++   V  G++L +  +T     GR+  E +  + + + +S+LRPSTAYLML++A+   GDV++DCMCGVGT+P     W   V  +GG++   A+D    N      S           C W A++LPLR   VD ++VDMPFG  CG    N+KLYP  +AEMARVLR  G AVLLV    LL
Sbjct:   48 VERGEAAVGKLLLYTTSSLADVKSLCSIQACLAYLGHTADI-----------ATATSA-------------------GLNQIGMLVERASTWSAALALWKDVHHDPXXXSSK--------------------------EDAPS-------SALRFRGSCVRDGKHAYSSEAIAGAVGTAVLNLHPKWTVSLSDFDVEVVALVMHSHVVCGISLAENSKTINYRGGRLAPEAR-HLSSLQYISTLRPSTAYLMLQLAKCQPGDVVLDCMCGVGTLPACAVRWGRHVFGLGGDVTRDAVDQASANCTGQYAS----------ICQWSAENLPLRAACVDRILVDMPFGIRCGNSVNNSKLYPKAIAEMARVLRLYGIAVLLVMSKKLL 359          
BLAST of mRNA_Ecto-sp13_S_contig13392.2713.1 vs. uniprot
Match: A0A6G0WHI5_9STRA (UPF0020 domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WHI5_9STRA)

HSP 1 Score: 181 bits (459), Expect = 9.850e-48
Identity = 102/236 (43.22%), Postives = 143/236 (60.59%), Query Frame = 1
Query:  589 TSLKFRASVVRDGQHPFSSVEASPRLGGAVWSVNRGWTVDLKGYDVEVVAFILERGVAVGLALDGD-RTKRCSHGRVPKEDKGFIETGKRMSSLRPSTAYLMLRMAEPVVGDVIVDCMCGVGTIPFLGADWFPGVCLVGGEIDDSAIDHLRRNAQSLRRSPAGRAGAAGGACAWDAQSLPLRDGSVDAMVVDMPFGQSCGTPRQNAKLYPLVMAEMARVLRPSGRAVLLVTQPHLL 1293
            +S++FRAS VRDG H +SS   + ++G A+      WTV L  +D+EVVA ++   V  G++L  D +T      R+  E +  + + + MS+LRPSTAYLML++A    GDV++DCMCGVGTIP   + W P V  +GG++   A+   R N Q   R+           C W ++ LPLR  SVD ++VDMPFG  CG   +N++LYP  + EMARVLRP+G AVLLV    +L
Sbjct:  126 SSIRFRASCVRDGTHKYSSEVIAGKVGAAIVRKFH-WTVSLVDFDLEVVAIVMHHDVICGISLAADPKTINFRGARLAPEPRR-LASFQYMSTLRPSTAYLMLQLATCNAGDVVLDCMCGVGTIPACSSHWAP-VFGLGGDVSPDAVAQARVNLQQSPRAAV---------CLWSSERLPLRPESVDRILVDMPFGIQCGNATKNSRLYPKALQEMARVLRPNGTAVLLVLSKKML 349          
BLAST of mRNA_Ecto-sp13_S_contig13392.2713.1 vs. uniprot
Match: T0S6C0_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0S6C0_SAPDV)

HSP 1 Score: 178 bits (452), Expect = 1.640e-46
Identity = 98/235 (41.70%), Postives = 143/235 (60.85%), Query Frame = 1
Query:  592 SLKFRASVVRDGQHPFSSVEASPRLGGAVWSVNRGWTVDLKGYDVEVVAFILERGVAVGLALDGDRTKRCSHGRVPKEDKGFIETG-KRMSSLRPSTAYLMLRMAEPVVGDVIVDCMCGVGTIPFLGADWFPGVCLVGGEIDDSAIDHLRRNAQSLRRSPAGRAGAAGGACAWDAQSLPLRDGSVDAMVVDMPFGQSCGTPRQNAKLYPLVMAEMARVLRPSGRAVLLVTQPHLL 1293
            S +FRAS VRDG+H ++S + +  +GGA+   + GW V L  + +EVV F+L   V  G++L  D  K     R+  E++    T  + +S+LRPSTAY++L++A    GD+++D MCGVGTIP         V  +GG++++ A++   RN  +   +           C WD+Q LPLRDGSVD +V+DMPFG  CG+ ++N+KLYP  MAE+ RVLR  GR VLLV    L+
Sbjct:  125 SFRFRASCVRDGKHAYNSEKIAGEVGGALLE-HFGWKVSLTEFHMEVVCFVLHNHVVCGVSL-ADPRKIFFKSRLANEERHPSMTSIQYISTLRPSTAYMLLQLARIEAGDIVLDAMCGVGTIPASATYLAAPVFALGGDVEEDAVEKAGRNVAARPAT----------ICQWDSQRLPLRDGSVDKIVIDMPFGVRCGSHQKNSKLYPRCMAELCRVLRDHGRIVLLVMSKKLI 347          
BLAST of mRNA_Ecto-sp13_S_contig13392.2713.1 vs. uniprot
Match: H3H0U1_PHYRM (Uncharacterized protein n=10 Tax=Phytophthora TaxID=4783 RepID=H3H0U1_PHYRM)

HSP 1 Score: 177 bits (448), Expect = 8.310e-46
Identity = 105/247 (42.51%), Postives = 144/247 (58.30%), Query Frame = 1
Query:  553 EDAPRPVGDIDVTSLKFRASVVRDGQHPFSSVEASPRLGGAVWSVNRGWTVDLKGYDVEVVAFILERGVAVGLALDGDRTKRCSHGRVPKEDKGFIETGKRMSSLRPSTAYLMLRMAEPVVGDVIVDCMCGVGTIPFLGADWFP-GVCLVGGEIDDSAIDHLRRNAQSLRRSPAGRAGAAGGACAWDAQSLPLRDGSVDAMVVDMPFGQSCGTPRQNAKLYPLVMAEMARVLRPSGRAVLLVTQPHL 1290
            + A RPV D D+   KFR S VRDG+H ++S   +  +G  V     GW V+L  +D+EVV  I  + +  G+AL  D  K     R+  E +  +   + +S+LRPSTAYLML++A+   GDV++D MCG+GT+P   AD+   GV  +GGE+D+       +NA +  R P   A        WD+  LPLR  S+D +++DMPFG  CG  RQN KLYP V  E+ RVLRP GRAVLL+    L
Sbjct:  117 QHAVRPVEDSDI---KFRGSCVRDGKHAYNSQAVAGEVGARVVETC-GWGVNLTEFDLEVVVVIFYKFMVAGIAL-ADPRKIQFRNRLANESRSALADAQYVSTLRPSTAYLMLQLAQHNYGDVVLDSMCGIGTLPICSADFTNNGVYALGGELDELPSGKAGQNALTRPR-PVDIA-------RWDSARLPLRSHSIDRVMIDMPFGVRCGNQRQNNKLYPKVFKELLRVLRPDGRAVLLIMSKKL 350          
BLAST of mRNA_Ecto-sp13_S_contig13392.2713.1 vs. uniprot
Match: A0A8K1FNN1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FNN1_PYTOL)

HSP 1 Score: 177 bits (449), Expect = 8.400e-46
Identity = 102/236 (43.22%), Postives = 138/236 (58.47%), Query Frame = 1
Query:  577 DIDVT-SLKFRASVVRDGQHPFSSVEASPRLGGAVWSVNRGWTVDLKGYDVEVVAFILERGVAVGLALDGDRTKRCSHGRVPKEDKGFIETGKRMSSLRPSTAYLMLRMAEPVVGDVIVDCMCGVGTIPFLGADWFPG-VCLVGGEIDDSAIDHLRRNAQSLRRSPAGRAGAAGGACAWDAQSLPLRDGSVDAMVVDMPFGQSCGTPRQNAKLYPLVMAEMARVLRPSGRAVLLVT 1278
            D D T S  FR S VRDG+H F SVE +  +GGAV +   GW VDL   D+EVV  +    + VGL+L  D TK     R+  ED+  +   K +S+LRPST Y MLR+A    GD+++D MCGVGTIP   A      +  +GGE+D   +    +NAQ+  R+             WD+  LPLR+ SVD +++D+PFG  CG  RQ++K+YP V  E+ RV+RP  RAVLL +
Sbjct:  149 DTDATTSPSFRGSCVRDGRHAFKSVEVAAEIGGAV-AEKFGWKVDLTQCDLEVVCLVFHTHMIVGLSL-ADTTKIQFRNRMANEDRSIMADSKYVSTLRPSTTYHMLRLAGYKKGDILLDSMCGVGTIPIWCAQVTENEIFALGGELDSLPVTKAGQNAQTKPRNV--------DIMQWDSTRLPLRNESVDKVIIDLPFGVRCGNARQHSKIYPKVFKELYRVMRPGSRAVLLTS 374          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13392.2713.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FYS5_ECTSI0.000e+091.23THUMP domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KWC7_9PHAE8.240e-18490.58UPF0020 domain-containing protein n=1 Tax=Ectocarp... [more]
A0A6H5KUR7_9PHAE8.830e-16580.92THUMP domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A485LJ24_9STRA8.160e-5144.68Aste57867_20172 protein n=1 Tax=Aphanomyces stella... [more]
A0A024TEQ6_9STRA1.290e-5036.54Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
W4FQN6_9STRA3.190e-4933.94UPF0020 domain-containing protein n=2 Tax=Aphanomy... [more]
A0A6G0WHI5_9STRA9.850e-4843.22UPF0020 domain-containing protein n=1 Tax=Aphanomy... [more]
T0S6C0_SAPDV1.640e-4641.70Uncharacterized protein n=1 Tax=Saprolegnia diclin... [more]
H3H0U1_PHYRM8.310e-4642.51Uncharacterized protein n=10 Tax=Phytophthora TaxI... [more]
A0A8K1FNN1_PYTOL8.400e-4643.22Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13392contigEcto-sp13_S_contig13392:96..4530 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score950.3
Seed ortholog evalue4.5e-274
Seed eggNOG ortholog2880.D7FYS5
Preferred nameTHUMPD3
Model size1863
Hectar predicted targeting categorysignal peptide
GOsGO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0030488,GO:0031974,GO:0031981,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0070013,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360
Exons6
EggNOG free text desc.tRNA (guanine) methyltransferase activity
EggNOG OGs2QSE5@2759,COG0116@1
Ec32 ortholog descriptionPutative RNA methylase domain
Ec32 orthologEc-19_002340.1
Cds size1863
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13392.2713.1prot_Ecto-sp13_S_contig13392.2713.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig13392 96..4530 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462715.7379367-CDS-Ecto-sp13_S_contig13392:95..2101681462715.7379367-CDS-Ecto-sp13_S_contig13392:95..210Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13392 96..210 +
1681462715.7520492-CDS-Ecto-sp13_S_contig13392:1302..14121681462715.7520492-CDS-Ecto-sp13_S_contig13392:1302..1412Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13392 1303..1412 +
1681462715.7626529-CDS-Ecto-sp13_S_contig13392:1924..24131681462715.7626529-CDS-Ecto-sp13_S_contig13392:1924..2413Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13392 1925..2413 +
1681462715.772861-CDS-Ecto-sp13_S_contig13392:2747..28411681462715.772861-CDS-Ecto-sp13_S_contig13392:2747..2841Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13392 2748..2841 +
1681462715.783657-CDS-Ecto-sp13_S_contig13392:3166..32931681462715.783657-CDS-Ecto-sp13_S_contig13392:3166..3293Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13392 3167..3293 +
1681462715.7934706-CDS-Ecto-sp13_S_contig13392:3602..45301681462715.7934706-CDS-Ecto-sp13_S_contig13392:3602..4530Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13392 3603..4530 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig13392.2713.1

>prot_Ecto-sp13_S_contig13392.2713.1 ID=prot_Ecto-sp13_S_contig13392.2713.1|Name=mRNA_Ecto-sp13_S_contig13392.2713.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=621bp
YLLLCLGGLQTAVKAEVRRHLEASRQEGDIYVFEEDFGGAPDQVEGVHSG
QAGCGKLLVATDAPPETLRSLRCVQGLFALVAHSASLDITKSPRQAAEST
GTSAPQQMASGEAPAEEPNKTEASLARLESLVTDSPRWPAAINVWKRFKV
SQARSTEAAATGAGDVSGTEPRDCPALGWPGQEGEDAPRPVGDIDVTSLK
FRASVVRDGQHPFSSVEASPRLGGAVWSVNRGWTVDLKGYDVEVVAFILE
RGVAVGLALDGDRTKRCSHGRVPKEDKGFIETGKRMSSLRPSTAYLMLRM
AEPVVGDVIVDCMCGVGTIPFLGADWFPGVCLVGGEIDDSAIDHLRRNAQ
SLRRSPAGRAGAAGGACAWDAQSLPLRDGSVDAMVVDMPFGQSCGTPRQN
AKLYPLVMAEMARVLRPSGRAVLLVTQPHLLGVPGLRRDNQKDRKKLRKM
AKQASRVDDRGHRDLGGDIEGRAAPEETGSGERCGESTSRQAGSINCSSD
GGMSKDVASTVGHGVENVTKREKEDVDPSVSGARASPAPEKGKSDFPLRD
SERGVAAAAPGAMWRIRARHAVNVGGLISHLLLLDRTDEPPRSSRVDRRR
RVVGPKAYCKRHHGGGTVSS*
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mRNA from alignment at Ecto-sp13_S_contig13392:96..4530+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig13392.2713.1 ID=mRNA_Ecto-sp13_S_contig13392.2713.1|Name=mRNA_Ecto-sp13_S_contig13392.2713.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4435bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13392:96..4530+ (Ectocarpus species13 EcNAP12_S_4_19m)
TACCTACTGCTCTGCCTGGGAGGGTTGCAAACTGCTGTCAAGGCGGAGGT GAGGCGGCACCTGGAAGCGTCTCGACAGGAAGGAGACATTTACGTGTTCG AGGAAGATTTTGGAGGTGCGGCATACCTATAATGCGCTGCGGAATTAACT TTACGTCATGCCTATTACTGTTATGATGACCATGAACTTGATCCCCTTCG TGATTGCATTGTTGTTGACGGAAAACTTAGGGGCGCACTGGGGATCGCAC CACCTCCTCTGAAAAAACCAGGAAACGCCTGCGTATCTCGGTTTTCCAAA GTCTAACTTCAGTACGAAATTTCCATCGCAAATTAACCGTCCGCTCGTCC CCCTCATGTACAATGTTAGTAGCTGAGGTTGTAGCCCTTGCGATACACTA CAGACTAGCGGTCCGCGATTTTCCAAACGATCCTTTTATTATCGAGTTCG GTGAGCTACAAGCTAGATTTTTGAAGCTGCTGTGCGGTCCGATTTTGAAA CGCTTCAAGCACCTTTGCTTAAGGCCAGACATGCCTATACATGACCCCAC GCATTCAAATTGACAATGGCGACCAGCTGGACATGTGAGGGAAGAGCTGT GCTGAAGTTCGCGGCCCCGTACACTCACATAGGCGGTGATTCGTGTTCAC CGTGTGCTTGAAGCGTTTCAAAATCGGACCGCACAGCAGCTTCAAAAATC TAGCTTGTAGCTCACCGAACTCGATGATAGAAGGATTGTTTGACAAATCG CGGACCGCTAGTCTATAGTGTATCGCAAGGGCTACAACCTCAGCTACTAA CATTGTACATGAGGGGGGCGAGCGGACGGTTAATTTGCGATGGAAGTTTC GTACTGAAGTTAGACTTTGGAAAACCGAGATATGCAATCGTTTCCAGGCG TTTCCTGTTTTTTTGAAGAGGAAACACTGCGATCCCCAGTGCGCCCTTAA GCAACCCATTACAACTCACCGTGCATGTACATTGTGAACTGCTGCGCACT ATGTAGCGCACGTTCAAATCGATTCATCCCCAATGGCAGCAGTGAAGTAC ATTTTGCGTTTTTTGTCATCCAAAATAAAACATTAACAATAATGCACTAC AGCTGTAGACTGAATTGCAGCGCACGAAGAGTACATACCTCGTTTAGCCT CTTCGTATCCGCCCGCCATGCTACAACAGCGAGACATAACGTGATGGCGA AAACCAGGAGCACCAGACCAAGTCGAAGGGGTTCACTCTGGCCAGGCGGG TTGCGGGAAGCTGCTGGTGGCAACCGATGCTCCGCCCGAGACCCTGAGAT CGCTTCGTTGCGTCCAGGTATGATACGTGACTTCTGTAGTCACAGGTACA ACAACATCTCGAATGCGCCTTTCCTTCACGAGTGGACGTGCTCGTATGCT TAAGCAGCACCCTACTATTGAACGACCACCTCACAACGCAAGGACGGTCG TGCCTGTCTATTTGCTCCCGTTGTGTCTGTGTGTTTGATACGGCGTAGTT GCGTGTGCCTATGTACCGTACTTGTGGTGATGCCTCGCGTCGTGCTACGT GCCACTGATACCAACCTACACGTCGCGGACGCGGTTGTTAGCTTTTGTTC GCACCGCAGAACCGTGCAGAACAGGATTCAAAATTCAATAAAAGTCTGAA TTATGTCGACTAAGACTAGCTTAGAAAAAGGCTCAGGCATGTTTCCGCAA GCGCGAGGCCTCAGTGCGCGGCAGTGATTTTCACTCCTTTGTTCCCATCC CATAACGCTGCCGGCGAACATACATGCCGCACGACCCTTCGCTCTCGACC TGAACGGGTGCACACGTGCACACGCCAAGGGCTTGTTCGCCCTCGTCGCG CACTCCGCAAGCTTGGACATCACGAAGAGTCCTCGACAGGCCGCCGAGTC CACTGGAACATCTGCCCCGCAGCAGATGGCCTCTGGAGAAGCCCCAGCGG AAGAGCCCAACAAGACAGAAGCCTCGCTCGCTCGCTTGGAGTCCCTCGTG ACGGACTCCCCCCGGTGGCCTGCGGCCATAAACGTGTGGAAGCGATTCAA GGTTTCACAAGCACGGTCGACGGAAGCAGCAGCTACAGGTGCTGGGGATG TCAGCGGCACTGAACCGAGAGATTGTCCCGCCTTGGGTTGGCCCGGCCAA GAGGGGGAGGATGCGCCGCGGCCCGTTGGCGACATTGACGTTACCAGCCT CAAGTTCCGGGCGTCTGTGGTGCGGGATGGGCAGCACCCTTTCAGCTCCG TCGAGGCGTCCCCGAGGCTCGGAGGAGCCGTGTGGTCCGTGAACCGTGGA TGGACCGTTGATTTAAAGGTGAGGATGAGGGGGTGGAGGACTTCTTGTGA ATGAACCTGTCGTGGTTGCTGCGCCGCGTGTGTTGGTTCGCAAGCGAGGG GAAGGAAAGGCTGACCCTACGTGTTCGGCTTCCTGCCTACGACAAACGTC TGGGATGGGAGACTTTGAGGGGTCTTCGGCTGGCGGCGCTAGGTGGCTCT CGCCACGACTCGGAACAGCTGGTCCTGTGTCATTGTCCCCCGAACGCTGT TTTGCACCTGTTACGAGGTCTGAGTCGTTTGTACTGACAGCAGGACGCCC CTTCTGTCTACGGGCCCCTCGCCCCTGCTTCACGATTGTCCTGATTTATC AGGGGTATGATGTGGAGGTAGTGGCCTTCATTTTGGAGAGGGGTGTGGCT GTGGGGCTCGCTCTGGACGGCGACCGAACCAAGCGTTGCTCCCACGGTGA GATGTTTGTTGCCCGCCCTCCCTCTCCAGTGTAGAGCTGTTCGACCCTGC AGTGTTGATGGTATCTGGCGGCCTCAGCAACGAAACTTCAGTGAGCTTCC CCCGGGAAATCTTAAGTGGGTAGCTGCAGGTGGACGGACAGGTTCTGCTT TCGTCAACATGCTTGGACCACTACATACGTGCGATCGTGTAGCACGTGTT GAAGCCACGAAATTCGGCGAAACGTCAAATTCGAAATAGGAGAGCAATTT CAGAACGCTTCCCCCATCCTTAAGCACGCGTCGCTACGGTGCCAACCAGC TTTCCTTCTTTGACCCTGTAGGTCGCGTTCCGAAAGAAGACAAGGGTTTC ATAGAAACCGGGAAGCGCATGTCATCCCTCCGACCCAGCACCGCGTACCT CATGCTCCGCATGGCGGAACCCGTGGTCGGGGATGTGATTGTCGACTGGT GAGCAATATCCGCCGTTCTTGACGTTAGTTGCTTCGTCGGGTTGGAAAGC TCTTTCTACCCAGCGGCGCAAGGCGTATGCGGGCAACCGTCACGCATCAT CGCGTTGGCTACAGAGCGGTACCACGTGTTGCTCTTCCTGACAGCTTCCC CACCTGTGCGGTCACCAGCTCAGCACTCTGTTCCCGTTTGATGTTGAGTT GACATAGCCATGGCGTAAGCCCGGCATCTTCGTGGTAACGACAGCACAAG GTGCGCAATGCCCGAACTAACGAGCTTTCCCGCTGTCATGTTCACCTTCT CCTGAAGCATGTGCGGCGTAGGGACGATCCCTTTCTTGGGCGCGGACTGG TTCCCGGGCGTGTGTTTGGTGGGAGGAGAGATCGATGACAGCGCTATCGA CCACCTACGGCGAAACGCCCAGTCCTTGAGGCGGTCGCCCGCTGGCCGAG CAGGGGCTGCCGGTGGTGCCTGCGCGTGGGATGCCCAGTCACTGCCTCTT CGCGATGGCTCGGTGGACGCGATGGTCGTTGACATGCCGTTCGGTCAGTC TTGCGGAACCCCGAGACAGAACGCAAAGCTCTACCCTCTGGTGATGGCCG AGATGGCGAGGGTCCTTCGTCCTTCCGGGCGTGCCGTGCTGCTCGTGACG CAGCCCCATCTCCTTGGTGTGCCGGGACTGCGGCGAGATAACCAAAAGGA CAGGAAGAAGTTGCGGAAGATGGCGAAACAGGCGAGCAGGGTCGACGATC GGGGGCATCGTGACCTCGGTGGGGATATCGAGGGAAGAGCAGCACCAGAA GAGACCGGGTCGGGCGAGAGGTGCGGGGAGAGTACATCCCGACAAGCCGG GAGTATCAATTGCAGCAGCGATGGAGGCATGAGCAAAGACGTTGCCAGCA CAGTAGGTCACGGGGTAGAGAACGTCACCAAGCGAGAAAAGGAAGACGTT GACCCAAGCGTTTCCGGAGCCCGGGCGTCACCAGCACCAGAAAAGGGAAA AAGTGATTTTCCTCTGCGTGACAGCGAGAGAGGCGTAGCAGCTGCTGCAC CAGGAGCTATGTGGCGCATTAGGGCTCGGCATGCGGTGAACGTCGGGGGG CTAATTTCCCACCTGCTGCTTTTGGATCGGACAGACGAACCTCCGCGATC GTCGCGCGTAGACCGACGGCGTCGTGTGGTCGGGCCGAAGGCTTACTGTA AGCGCCATCATGGAGGGGGTACTGTGTCGTCATGA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig13392:96..4530+

>mRNA_Ecto-sp13_S_contig13392.2713.1 ID=mRNA_Ecto-sp13_S_contig13392.2713.1|Name=mRNA_Ecto-sp13_S_contig13392.2713.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1863bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13392:96..4530+ (Ectocarpus species13 EcNAP12_S_4_19m)
TACCTACTGCTCTGCCTGGGAGGGTTGCAAACTGCTGTCAAGGCGGAGGT
GAGGCGGCACCTGGAAGCGTCTCGACAGGAAGGAGACATTTACGTGTTCG
AGGAAGATTTTGGAGGAGCACCAGACCAAGTCGAAGGGGTTCACTCTGGC
CAGGCGGGTTGCGGGAAGCTGCTGGTGGCAACCGATGCTCCGCCCGAGAC
CCTGAGATCGCTTCGTTGCGTCCAGGGCTTGTTCGCCCTCGTCGCGCACT
CCGCAAGCTTGGACATCACGAAGAGTCCTCGACAGGCCGCCGAGTCCACT
GGAACATCTGCCCCGCAGCAGATGGCCTCTGGAGAAGCCCCAGCGGAAGA
GCCCAACAAGACAGAAGCCTCGCTCGCTCGCTTGGAGTCCCTCGTGACGG
ACTCCCCCCGGTGGCCTGCGGCCATAAACGTGTGGAAGCGATTCAAGGTT
TCACAAGCACGGTCGACGGAAGCAGCAGCTACAGGTGCTGGGGATGTCAG
CGGCACTGAACCGAGAGATTGTCCCGCCTTGGGTTGGCCCGGCCAAGAGG
GGGAGGATGCGCCGCGGCCCGTTGGCGACATTGACGTTACCAGCCTCAAG
TTCCGGGCGTCTGTGGTGCGGGATGGGCAGCACCCTTTCAGCTCCGTCGA
GGCGTCCCCGAGGCTCGGAGGAGCCGTGTGGTCCGTGAACCGTGGATGGA
CCGTTGATTTAAAGGGGTATGATGTGGAGGTAGTGGCCTTCATTTTGGAG
AGGGGTGTGGCTGTGGGGCTCGCTCTGGACGGCGACCGAACCAAGCGTTG
CTCCCACGGTCGCGTTCCGAAAGAAGACAAGGGTTTCATAGAAACCGGGA
AGCGCATGTCATCCCTCCGACCCAGCACCGCGTACCTCATGCTCCGCATG
GCGGAACCCGTGGTCGGGGATGTGATTGTCGACTGCATGTGCGGCGTAGG
GACGATCCCTTTCTTGGGCGCGGACTGGTTCCCGGGCGTGTGTTTGGTGG
GAGGAGAGATCGATGACAGCGCTATCGACCACCTACGGCGAAACGCCCAG
TCCTTGAGGCGGTCGCCCGCTGGCCGAGCAGGGGCTGCCGGTGGTGCCTG
CGCGTGGGATGCCCAGTCACTGCCTCTTCGCGATGGCTCGGTGGACGCGA
TGGTCGTTGACATGCCGTTCGGTCAGTCTTGCGGAACCCCGAGACAGAAC
GCAAAGCTCTACCCTCTGGTGATGGCCGAGATGGCGAGGGTCCTTCGTCC
TTCCGGGCGTGCCGTGCTGCTCGTGACGCAGCCCCATCTCCTTGGTGTGC
CGGGACTGCGGCGAGATAACCAAAAGGACAGGAAGAAGTTGCGGAAGATG
GCGAAACAGGCGAGCAGGGTCGACGATCGGGGGCATCGTGACCTCGGTGG
GGATATCGAGGGAAGAGCAGCACCAGAAGAGACCGGGTCGGGCGAGAGGT
GCGGGGAGAGTACATCCCGACAAGCCGGGAGTATCAATTGCAGCAGCGAT
GGAGGCATGAGCAAAGACGTTGCCAGCACAGTAGGTCACGGGGTAGAGAA
CGTCACCAAGCGAGAAAAGGAAGACGTTGACCCAAGCGTTTCCGGAGCCC
GGGCGTCACCAGCACCAGAAAAGGGAAAAAGTGATTTTCCTCTGCGTGAC
AGCGAGAGAGGCGTAGCAGCTGCTGCACCAGGAGCTATGTGGCGCATTAG
GGCTCGGCATGCGGTGAACGTCGGGGGGCTAATTTCCCACCTGCTGCTTT
TGGATCGGACAGACGAACCTCCGCGATCGTCGCGCGTAGACCGACGGCGT
CGTGTGGTCGGGCCGAAGGCTTACTGTAAGCGCCATCATGGAGGGGGTAC
TGTGTCGTCATGA
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