prot_Ecto-sp13_S_contig13384.2705.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13384.2705.1
Unique Nameprot_Ecto-sp13_S_contig13384.2705.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length132
Homology
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BLAST of mRNA_Ecto-sp13_S_contig13384.2705.1 vs. uniprot
Match: D7FMS8_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMS8_ECTSI)

HSP 1 Score: 216 bits (550), Expect = 3.200e-67
Identity = 113/121 (93.39%), Postives = 115/121 (95.04%), Query Frame = 0 
Query:    1 MAKYFERAVTRCGDLLATLDGKPVHAQHRYMLQRLDRHKRSEARKSAAKTLARSNIHAPIAEPGAQREDLARLHDADFSEGHSHSQHQDPPKKSSMLDLNPSLRTTRAGVRFASSVDTSSS 121
            MAKYFERAVTRCGDLLATLDGKPVHAQHR MLQRLDRHKRSEARKSAAKTLARSN HAPIAEPGAQRED ARLHD DFS+GHSHS+HQDP KKSSMLDLNPSLRTTRAGVRFASSV TSSS
Sbjct:  234 MAKYFERAVTRCGDLLATLDGKPVHAQHRSMLQRLDRHKRSEARKSAAKTLARSNTHAPIAEPGAQREDSARLHDGDFSKGHSHSEHQDPAKKSSMLDLNPSLRTTRAGVRFASSVGTSSS 354
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13384.2705.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FMS8_ECTSI3.200e-6793.39Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13384contigEcto-sp13_S_contig13384:2646..3642 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13384.2705.1mRNA_Ecto-sp13_S_contig13384.2705.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13384 2573..3723 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13384.2705.1 ID=prot_Ecto-sp13_S_contig13384.2705.1|Name=mRNA_Ecto-sp13_S_contig13384.2705.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=132bp
MAKYFERAVTRCGDLLATLDGKPVHAQHRYMLQRLDRHKRSEARKSAAKT
LARSNIHAPIAEPGAQREDLARLHDADFSEGHSHSQHQDPPKKSSMLDLN
PSLRTTRAGVRFASSVDTSSSGTSQMIATSR*
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