prot_Ecto-sp13_S_contig13365.2689.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13365.2689.1
Unique Nameprot_Ecto-sp13_S_contig13365.2689.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length97
Homology
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BLAST of mRNA_Ecto-sp13_S_contig13365.2689.1 vs. uniprot
Match: D7G864_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G864_ECTSI)

HSP 1 Score: 180 bits (456), Expect = 4.530e-53
Identity = 91/96 (94.79%), Postives = 94/96 (97.92%), Query Frame = 0 
Query:    1 MNWAHLSGHGHEDELALTSICHQAGEEVIAIRSLHEGGNQMVLTQIVRRPAEGSEVRAKHFFKRVTSKSELRSGGKQQHKRQKGLSSTVVTVRRKK 96
            MNWAHLSGHG EDELALTSICHQAGEEVIAIRSLHEGG+QMVLTQIVRRPAEG EVRAKHFFKRVTSKSELRSGGKQQHK+QKGLSST+VTVRRKK
Sbjct:  340 MNWAHLSGHGREDELALTSICHQAGEEVIAIRSLHEGGDQMVLTQIVRRPAEGYEVRAKHFFKRVTSKSELRSGGKQQHKQQKGLSSTIVTVRRKK 435
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BLAST of mRNA_Ecto-sp13_S_contig13365.2689.1 vs. uniprot
Match: A0A835YHH8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHH8_9STRA)

HSP 1 Score: 56.6 bits (135), Expect = 3.240e-7
Identity = 25/46 (54.35%), Postives = 37/46 (80.43%), Query Frame = 0 
Query:   24 AGEEVIAIRSLHEGGNQMVLTQIVRRPAEGSEVRAKHFFKRVTSKS 69
            A  E+IA+R+L +GG+ +VL QIVR+PA G E RA+H FKR+T+++
Sbjct:  346 AAIEMIAVRTLEDGGDVLVLQQIVRKPATGEEARARHIFKRITARN 391
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BLAST of mRNA_Ecto-sp13_S_contig13365.2689.1 vs. uniprot
Match: A0A836CAN9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAN9_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 1.430e-6
Identity = 25/40 (62.50%), Postives = 32/40 (80.00%), Query Frame = 0 
Query:   27 EVIAIRSLHEGGNQMVLTQIVRRPAEGSEVRAKHFFKRVT 66
            E+IA+R+L +GG  +VL QIVRRPA G E RA+H FKR+T
Sbjct:  218 EMIAVRTLEDGGATLVLQQIVRRPATGEEARARHIFKRLT 257
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13365.2689.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G864_ECTSI4.530e-5394.79Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YHH8_9STRA3.240e-754.35Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CAN9_9STRA1.430e-662.50Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13365contigEcto-sp13_S_contig13365:2189..2479 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13365.2689.1mRNA_Ecto-sp13_S_contig13365.2689.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13365 1977..4028 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13365.2689.1 ID=prot_Ecto-sp13_S_contig13365.2689.1|Name=mRNA_Ecto-sp13_S_contig13365.2689.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=97bp
MNWAHLSGHGHEDELALTSICHQAGEEVIAIRSLHEGGNQMVLTQIVRRP
AEGSEVRAKHFFKRVTSKSELRSGGKQQHKRQKGLSSTVVTVRRKK*
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