mRNA_Ecto-sp13_S_contig13358.2684.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig13358.2684.1
Unique NamemRNA_Ecto-sp13_S_contig13358.2684.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig13358.2684.1 vs. uniprot
Match: A0A6H5L1H5_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1H5_9PHAE)

HSP 1 Score: 580 bits (1496), Expect = 7.530e-207
Identity = 323/379 (85.22%), Postives = 327/379 (86.28%), Query Frame = 1
Query:    1 KSIKILDLSNTDLAKVFRLFCKYDTAQRGCLSLANVYKMLGEKKSIFGDSLFELIGIRDFQELTFSEWLDAITTFCLFEEEEILRFCFFILDREKNGYIEKDEMRMLVNMLYNIDPVKGPTGNTKVAFDKLSVQQDGKIEFWEFELFNKAFPSLFFPAFRLQ------------VKMMQAVWGEAWWGRKKRQFQDRLELRRKHEEEDRLADANRLEAMRQRRIKRKMGACKYFCWPCGRAEYDKMFPRANVVVADPAADEAERLRK---------------------------QAEEKARLQREMEARYLNPETQEYKKFREKLDAKKEKENXXXXXXXXXXXXXXXXXXXNADERRLRLENRRVKNGRLPPVGGVFG 1020
            KSIKILDLSNTDLAKVFRLFCKYDTAQRGCLSLANVYKM+GEKKSIFGDSL+ELIGIRDFQELTFSEWLDAITTFCLFEEEEILRFCFFILDREKNGYIEK+EMRMLVNMLYNIDPVKGPTGNTKVAFDKLSVQQDGKIEFWEFELFNKAFPSL FPAFRLQ            VKMMQAVWGEAWWGRKKR+ QDRLELRRKHEEEDRLADANRLEAMRQRRIK KMGACKYFCWPCGRAEYDKMFPR NVVVADP ADEAERLRK                           QAEEKARLQREMEARYLN ETQEYKKFREKLDAKKEK  XXXXXXXXXXXX   XXX NADERRLRLENRRVKNGRLPPVGG FG
Sbjct:   18 KSIKILDLSNTDLAKVFRLFCKYDTAQRGCLSLANVYKMIGEKKSIFGDSLYELIGIRDFQELTFSEWLDAITTFCLFEEEEILRFCFFILDREKNGYIEKEEMRMLVNMLYNIDPVKGPTGNTKVAFDKLSVQQDGKIEFWEFELFNKAFPSLLFPAFRLQSTNPPAALTQTKVKMMQAVWGEAWWGRKKRKVQDRLELRRKHEEEDRLADANRLEAMRQRRIKSKMGACKYFCWPCGRAEYDKMFPRTNVVVADPGADEAERLRKVLRMIPPEDVNMREDRKRGGPAYITPAQAEEKARLQREMEARYLNYETQEYKKFREKLDAKKEKXXXXXXXXXXXXXXRSVXXXNNADERRLRLENRRVKNGRLPPVGGAFG 396          
BLAST of mRNA_Ecto-sp13_S_contig13358.2684.1 vs. uniprot
Match: D7G2J3_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2J3_ECTSI)

HSP 1 Score: 511 bits (1317), Expect = 2.090e-180
Identity = 254/255 (99.61%), Postives = 254/255 (99.61%), Query Frame = 1
Query:    1 KSIKILDLSNTDLAKVFRLFCKYDTAQRGCLSLANVYKMLGEKKSIFGDSLFELIGIRDFQELTFSEWLDAITTFCLFEEEEILRFCFFILDREKNGYIEKDEMRMLVNMLYNIDPVKGPTGNTKVAFDKLSVQQDGKIEFWEFELFNKAFPSLFFPAFRLQVKMMQAVWGEAWWGRKKRQFQDRLELRRKHEEEDRLADANRLEAMRQRRIKRKMGACKYFCWPCGRAEYDKMFPRANVVVADPAADEAERLRK 765
            KSIKILDLSNTDLAKVFRLFCKYDTAQRGCLSLANVYKMLGEKKSIFGDSLFELIGIRDFQELTFSEWLDAITTFCLFEEEEILRFCFFILDREKNGYIEKDEMRMLVNMLYNIDPVKGPTGNTKVAFDKLSVQQDGKIEFWEFELFNKAFPSLFFPAFRLQVKMMQAVWGEAWWGRKKR FQDRLELRRKHEEEDRLADANRLEAMRQRRIKRKMGACKYFCWPCGRAEYDKMFPRANVVVADPAADEAERLRK
Sbjct:   18 KSIKILDLSNTDLAKVFRLFCKYDTAQRGCLSLANVYKMLGEKKSIFGDSLFELIGIRDFQELTFSEWLDAITTFCLFEEEEILRFCFFILDREKNGYIEKDEMRMLVNMLYNIDPVKGPTGNTKVAFDKLSVQQDGKIEFWEFELFNKAFPSLFFPAFRLQVKMMQAVWGEAWWGRKKRNFQDRLELRRKHEEEDRLADANRLEAMRQRRIKRKMGACKYFCWPCGRAEYDKMFPRANVVVADPAADEAERLRK 272          
BLAST of mRNA_Ecto-sp13_S_contig13358.2684.1 vs. uniprot
Match: A0A835ZCW1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCW1_9STRA)

HSP 1 Score: 242 bits (617), Expect = 3.340e-73
Identity = 135/338 (39.94%), Postives = 200/338 (59.17%), Query Frame = 1
Query:    7 IKILDLSNTDLAKVFRLFCKYDTAQRGCLSLANVYKMLGEKKSIFGDSLFELIGIRDFQELTFSEWLDAITTFCLFEEEEILRFCFFILDREKNG------------------YIEKDEMRMLVNMLYNIDPVKGPTGNTK------------------------------VAFDKLSVQQDGKIEFWEFELFNKAFPSLFFPAFRLQVKMMQAVWGEAWWGRKKRQFQDRLELRRKHEEEDRLADANRLEAMRQRRIKRKMGACKYFCWPCGRAEYDKMFPR------ANVVVADPAADEAERLRKQAEEKARLQREMEARYLNPETQEYKKFREKL 858
            IK L L+NT+LA+ F +F  +DTA++G + LA  YKM+GE+KS+FGDS+F+L+G+RD +E+ F EWL AI T+CLF+E ++L++CF+ILDREK                    YI  DE ++L ++LYN+D  + P+GNT+                              +A +K+ VQ DGKIEFWE ELFNKAFPSL +PAFR+QVKM Q VWGE WW R++R   + +  R++ E     AD  R      +R++RK+G  +++C P     Y ++ P          + A  AA + E     A  KA+L+R M+ + L PET+EY++++E++
Sbjct:   19 IKALCLNNTELAQAFDIFQAHDTAKKGTIPLATFYKMIGERKSMFGDSIFDLLGVRDTREIDFGEWLQAIVTYCLFDESDVLKYCFYILDREKQQLRKGAVGGAKADAFIKERYIVMDESKLLADLLYNVDCKRRPSGNTRNGXXXXXXXXXXXXXXXXXXXXXXXXXXXRIALNKVPVQADGKIEFWELELFNKAFPSLLYPAFRMQVKMTQLVWGEDWWDRRRRMLNEDVATRKELERLALEADKKRRRKAYDQRVRRKLGVARFYCCPWAVDRYQELHPMDPPPLTPAQLAAMAAAQKTEAQLSAA--KAKLKRVMDMQMLIPETEEYRRYKERV 354          
BLAST of mRNA_Ecto-sp13_S_contig13358.2684.1 vs. uniprot
Match: A0A7S2C3E2_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C3E2_9STRA)

HSP 1 Score: 221 bits (562), Expect = 4.170e-66
Identity = 116/291 (39.86%), Postives = 184/291 (63.23%), Query Frame = 1
Query:    1 KSIKILDLSNTDLAKV---FRLFCKYDTAQRGCLSLANVYKMLGEKKSIFGDSLFELIGIRDFQELTFSEWLDAITTFCLFEEEEILRFCFFILDREKNGYIEKDEMRMLVNMLYNIDPVKGPTGNTKVAFDKLSVQQDGKIEFWEFELFNKAFPSLFFPAFRLQVKMMQAVWGEAWWGRKKRQFQDRLELRRKHEEEDRLADANRLEAMRQRRIKRKMGACKYFCWPCGRAEYDKMFP-----RANVVVADPAADEAERLRKQAEEKARLQREMEARYLNPETQEYKKFR 849
            +++K ++L + ++ ++   +  F   D    G + +++ YK   EK+SIFGD++FELI       L F E++ A+ T+CLFE++E+LRFCF+I D++KNGYIE++E+R +VN+LY + P     GNTKVA D+L    DGK++F EF+ FN++FP+LF+PAFR+QV M+  + G+AWW +KKR  QD  + +R  EE  +  +  RL  M+QR+I++KMG  +YFC    R +Y+ +FP       N   A   A+E  + R++A+  A L         NPET+E+  ++
Sbjct:   13 RTLKAMELGHINMKELGIFWSAFRSIDKKLTGSVDISDFYKFFEEKRSIFGDAIFELIDCNQSGSLDFGEFVHAVVTYCLFEQDEMLRFCFYIFDKDKNGYIEQEELRWMVNILYGLGPTDKLKGNTKVAVDRLDFNDDGKVDFKEFKEFNRSFPALFYPAFRIQVNMINLIAGDAWWEKKKRWLQDEKDRKRAREEYSKRKEKARLRKMQQRKIRKKMGYVRYFCCFLERKKYELLFPIEDSDNKNEKTAAQLAEERAKAREKAKHLAELA------IKNPETEEWHMYK 297          
BLAST of mRNA_Ecto-sp13_S_contig13358.2684.1 vs. uniprot
Match: A0A6S8V9R4_9STRA (Hypothetical protein n=3 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A6S8V9R4_9STRA)

HSP 1 Score: 185 bits (470), Expect = 2.010e-52
Identity = 115/334 (34.43%), Postives = 188/334 (56.29%), Query Frame = 1
Query:    1 KSIKILDLSNT---DLAKVFRLFCKYDTAQRGCLSLANVYKMLGEKKSIFGDSLFELIGIRDFQELTFSEWLDAITTFCLFEEEEILRFCFFILDREKNGYIEKDEMRMLVNMLYNIDPVKGPTGNTKVAFDKLSVQQDGKIEFWEFELFNKAFPSLFFPAFRLQVKMMQAVWGEAWWGRKKRQFQDRLELRRKHEEEDRLADANRLEAMRQRRIKRKMGACKYFCWPCGRAEYDKMFPRANVVVADPAADEAERLRKQAEEKARLQREMEARYLNPETQ---EYKKFREKLDAKKEKENXXXXXXXXXXXXXXXXXXXNADERRLRLENRRVK 984
            +++K+++  N    +LA  +R F + D    G +++   Y +  EK+SIFGD +F+L  I   +EL F E+L A+ T+CLFE +EILRFCF+I DR+KNGYI K+E+ +++ +LY+I P    +GNT+ A + L    D K+++ EF  F+  FP+LF+PAFR+Q  M+    G+ WW +KKR   +    R   E+     +  RL  +R++RI++KMG  +Y   P  RA + K+FP  +   A+    EAE   ++A+++   +R  E    NPET    +Y+K + +++  ++  +                   +A+ER LR   RR K
Sbjct:   13 RTLKVMEFINIGVKELAVFWRHFREGDKEMLGVIAIDQFYLLFHEKRSIFGDGIFDLCDIHHTEELDFGEYLVAVITYCLFEPQEILRFCFYIFDRDKNGYIMKEELELMLRVLYHIVPPNDFSGNTRNALELLDFNDDEKVDWQEFNRFHVLFPALFYPAFRIQQTMITQTMGQRWWDKKKRYLHEEKVRRDMIEQLAARKEHARLLKLREKRIRKKMGLLRYMFCPAQRAAFRKLFP-VDDAQAEKTLSEAELQVQKAKQREVERRLRELNAKNPETSAWGDYQKRKTRMEYAQQSADRTHPRR-------------SANERALRAATRRAK 332          
BLAST of mRNA_Ecto-sp13_S_contig13358.2684.1 vs. uniprot
Match: A0A2R5GWK3_9STRA (Calmodulin-like protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GWK3_9STRA)

HSP 1 Score: 169 bits (428), Expect = 5.790e-46
Identity = 100/256 (39.06%), Postives = 140/256 (54.69%), Query Frame = 1
Query:    1 KSIKILDLSNTDLAKVFRLFCKYDTAQRGCLSLANVYKMLGEKKSIFGDSLFELIGIRDFQELTFSEWLDAITTFCLFEEEEILRFCFFILDREKNGYIEKDEMRMLVNMLYNIDPVKGPTGNTKVAFDKLSVQQDGKIEFWEFELFNKAFPSLFFPAFRLQVKMMQAVWGEAWWGRKKRQFQDRLELRRKHEEEDRLADANRLEAMRQRRIKRKMGACKY-FCWPCGRAEYDKMFPRANVVVADPAADEAERLRK 765
            K+I +L LS  ++ K +R+F KYD    G + +   Y+++ E++++FGDSLFEL+ I     L FSE++  I T+ LF   +IL+FCFF+ D++KNGYI+ DE+  LV ML+       PT N + A        DGKI+F EF+  N  FP L  PAFR+Q  MM    GE WW  KK   Q+        EE  RL +  R    +QR+++ KMG   Y FC           F +   V+A  AA+EA R  K
Sbjct:   14 KTIDMLKLSKKEINKFWRIFQKYDRDHGGTIDVEEFYRLIEEERTVFGDSLFELVDIDCSGTLDFSEFVQTIATYALFARVDILKFCFFVFDKDKNGYIDSDELHALVEMLHG----NNPTSNCRTALANFDTNSDGKIDFEEFQAMNVRFPQLLHPAFRMQQNMMINTLGEQWWNGKKLMLQEERNADNALEERLRLKELQRQHRNQQRQVRHKMGFFGYYFC-----------FFKRGKVLAQIAAEEAIRAEK 254          
BLAST of mRNA_Ecto-sp13_S_contig13358.2684.1 vs. uniprot
Match: A0A7S2D7S8_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D7S8_9STRA)

HSP 1 Score: 165 bits (418), Expect = 4.160e-45
Identity = 99/275 (36.00%), Postives = 161/275 (58.55%), Query Frame = 1
Query:    1 KSIKILDLSNTDLAKVFRLFCKYDTAQRGCLSLANVY-KMLGEKKSIFGDSLFELIGIRDFQELTFSEWLDAITTFCLFEEEEILRFCFFILDREKNGYIEKDEMRMLVNMLYNIDPVKGPTGNTKVAFDKLSVQQDGKIEFWEFELFNKAFPSLFFPAFRLQVKMMQAVWGEAWWGRKKRQFQ-DRLELRRKHEEEDRLADANRLEAMRQRRIKRKMGACKYFCWPCGRAEYDKMFPRAN------VVVADPAADEAERLRKQAEEKARLQREM 801
            ++ +++ L+ +D+   + +F K D  + G ++  + + K++ E +++FG+++FELI   D  +L F E+L  + T+C F+E EIL+FCFFI DREKNGYI++DE++  V++L+N   V     N + AF  +  Q DGK +F EF+  NK FP++ +PAFR+Q  MM  + GE WW +KK     D+ + R  H    R    NR E  RQ++I+  MG  KY+  P  R+ +D+ +P  +      +   +    E E +RKQ E   RL+ E+
Sbjct:   14 RAAEMVKLNVSDIKGFWNVFRKCDYDRIGIVATEDFFTKIVQEGRNMFGNAIFELIDAEDPDKLEFGEFLQGVVTYCCFDELEILQFCFFIFDREKNGYIDQDELKFFVDVLHNEQQV----ANVRTAFQSIKFQTDGKFDFPEFQKLNKDFPTVLYPAFRMQQNMMLNIMGEDWWRQKKLMLTLDKEDQRSAHARMMRREFNNR-ERTRQKQIRHDMGPVKYYLQPSKRSMFDEKYPPMSMEELELIKAKEREKLEEELIRKQKEXXKRLENEL 283          
BLAST of mRNA_Ecto-sp13_S_contig13358.2684.1 vs. uniprot
Match: A0A8J2S6B5_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S6B5_9STRA)

HSP 1 Score: 157 bits (397), Expect = 3.210e-42
Identity = 83/237 (35.02%), Postives = 145/237 (61.18%), Query Frame = 1
Query:    1 KSIKILDLSNTDLAKVFRLFCKYDTAQRGCLSLANVY-KMLGEKKSIFGDSLFELIGIRDFQELTFSEWLDAITTFCLFEEEEILRFCFFILDREKNGYIEKDEMRMLVNMLYNIDPVKGPTGNTKVAFDKLSVQQDGKIEFWEFELFNKAFPSLFFPAFRLQVKMMQAVWGEAWWGRKKRQFQDRLELRRKHEEEDRLADANRLEAMRQRRIKRKMGACKYFCWPCGRAEYDKMFP 708
            K+++  +L   D+  ++ +F K+D  +R  +++++ Y K++   ++IF D LF+LI   D + + F E++ A+TT+C FE  E+L+FCFF+ DR+K G+I ++EMR+ V+ ++  +     + N + A D L  ++DGK +F EF+  +  +PS+ FPAFRLQ  MMQA+ GE +W  KK +   + E  RK E      +       R+ +++R MG+ KY+  P  RA+Y +++P
Sbjct:   22 KAMQTFNLKEKDIRVLWHMFKKHDKERRSIIAISDFYDKIVFVPRTIFCDGLFDLIEAADSESIDFGEFVAAVTTYCFFEIPEVLKFCFFVFDRDKKGFITQEEMRLFVDAMHGNEM----STNVEFALDNLKYRKDGKFDFEEFKGMHHLYPSVLFPAFRLQNAMMQAMGGEQFWESKKLELSMQKEDERKREANREAREKAEAYKYREDQVRRHMGSIKYYLMPKNRAKYYEVYP 254          
BLAST of mRNA_Ecto-sp13_S_contig13358.2684.1 vs. uniprot
Match: A0A8K1C2H3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C2H3_PYTOL)

HSP 1 Score: 147 bits (372), Expect = 4.270e-38
Identity = 88/247 (35.63%), Postives = 131/247 (53.04%), Query Frame = 1
Query:   16 LDLSNTDLAKVFRLFCKYDTAQRGCLSLANVYKMLGEKKSIFGDSLFELIGIRDFQELTFSEWLDAITTFCLFEEEEILRFCFFILDREKNGYIEKDEMRMLVNMLYNIDPVKGPTGNTKVAFDKLSVQQDGKIEFWEFELFNKAFPSLFFPAFRLQVKMMQAVWGEAWWGRKKRQFQDRLELRRKHEEEDRLA--------------DANRLEAMRQRRIKR-------KMGACKYFCWPCGRAEY 693
            L L + DL  ++  F K D  + G +  A  YK + EK S FGD++F LI   +  +L FSE+++A+  FC+  +E++L+FCF + D +KNG IE  E+  L+ ML+      G T N K AF       DGKI+F EF++ N  FPSL +PAFR+Q  M     G +WW +K  +          HE+ ++LA              D +  EA R+ ++KR       +MG C ++C PC R +Y
Sbjct:   23 LKLKDDDLKSLYAKFLKCDKDKGGTIDRAEFYKSIDEKDSEFGDAIFALIDEDNSGQLDFSEYVEALGKFCVLSKEDMLKFCFNVFDADKNGTIEGPELTHLMEMLH----ADGQTSNMKQAFKSFDFNDDGKIDFQEFQMLNAQFPSLLYPAFRIQQNMRIYTMGVSWWRKKIEELH--------HEKAEQLAKLQAMGEDKAKGDNDEDAKEAARRAKLKRQEQAVRIRMGCCMFYCCPCRRHKY 257          
BLAST of mRNA_Ecto-sp13_S_contig13358.2684.1 vs. uniprot
Match: W4FPF5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FPF5_9STRA)

HSP 1 Score: 147 bits (371), Expect = 5.200e-38
Identity = 82/236 (34.75%), Postives = 133/236 (56.36%), Query Frame = 1
Query:    1 KSIKILDLSNTDLAKVFRLFCKYD-----TAQRGCLSLANVYKMLGEKKSIFGDSLFELIGIRDFQELTFSEWLDAITTFCLFEEEEILRFCFFILDREKNGYIEKDEMRMLVNMLYNIDPVKGPTGNTKVAFDKLSVQQDGKIEFWEFELFNKAFPSLFFPAFRLQVKMMQAVWGEAWWGRKKRQFQDRLELRRKHEEEDRLADANRLEAMRQRRIKRKMGACKYFCWPCGRAEY 693
            K+I+ L L+ +DL  +++ F K D     T+  G +     ++   E+++  GD++F LI I +  +L FSE+++A+  FCL   +EIL+FCFF+ D++KNG IE  E+  L+ ML++       T N   A +K     DGK++F EF++ N+ FP+L +P +RLQ  M     GE+WW R+     D  +L+   E  D  A A      R+R+ ++ MG  +Y+  PC R+ Y
Sbjct:   16 KTIEKLQLNESDLRALYKRFSKSDKEVRRTSNSGSIDRTEFFRSFNEERTAVGDAVFALIDIDNSGQLDFSEYVEALGAFCLLNTDEILKFCFFVFDQDKNGTIEGMELDALLEMLHS----DSATSNMAAAMEKFDFNGDGKVDFKEFQILNQQFPTLLYPVYRLQQSMKVHSMGESWWNRRATLLNDLKDLK---ENGDAAAIAASKAKDRRRKTRQNMGCLRYYLCPCRRSAY 244          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13358.2684.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L1H5_9PHAE7.530e-20785.22EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
D7G2J3_ECTSI2.090e-18099.61EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
A0A835ZCW1_9STRA3.340e-7339.94Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2C3E2_9STRA4.170e-6639.86Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A6S8V9R4_9STRA2.010e-5234.43Hypothetical protein n=3 Tax=Pelagomonas calceolat... [more]
A0A2R5GWK3_9STRA5.790e-4639.06Calmodulin-like protein n=1 Tax=Hondaea fermentalg... [more]
A0A7S2D7S8_9STRA4.160e-4536.00Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A8J2S6B5_9STRA3.210e-4235.02Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A8K1C2H3_PYTOL4.270e-3835.63Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
W4FPF5_9STRA5.200e-3834.75Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13358contigEcto-sp13_S_contig13358:2062..4749 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score512.3
Seed ortholog evalue1.7e-142
Seed eggNOG ortholog2880.D7G2J3
Model size1023
Hectar predicted targeting categoryother localisation
Exons5
EggNOG OGs2DCZ5@1,2SCZN@2759
Ec32 ortholog descriptionEF-hand domain protein
Ec32 orthologEc-12_001730.1
Cds size1023
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462713.56654-CDS-Ecto-sp13_S_contig13358:2061..23191681462713.56654-CDS-Ecto-sp13_S_contig13358:2061..2319Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13358 2062..2319 -
1681462713.5790713-CDS-Ecto-sp13_S_contig13358:2749..30281681462713.5790713-CDS-Ecto-sp13_S_contig13358:2749..3028Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13358 2750..3028 -
1681462713.5897133-CDS-Ecto-sp13_S_contig13358:3886..42061681462713.5897133-CDS-Ecto-sp13_S_contig13358:3886..4206Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13358 3887..4206 -
1681462713.5995536-CDS-Ecto-sp13_S_contig13358:4404..45251681462713.5995536-CDS-Ecto-sp13_S_contig13358:4404..4525Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13358 4405..4525 -
1681462713.6103745-CDS-Ecto-sp13_S_contig13358:4704..47491681462713.6103745-CDS-Ecto-sp13_S_contig13358:4704..4749Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13358 4705..4749 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13358.2684.1prot_Ecto-sp13_S_contig13358.2684.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig13358 2062..4749 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig13358.2684.1

>prot_Ecto-sp13_S_contig13358.2684.1 ID=prot_Ecto-sp13_S_contig13358.2684.1|Name=mRNA_Ecto-sp13_S_contig13358.2684.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=341bp
KSIKILDLSNTDLAKVFRLFCKYDTAQRGCLSLANVYKMLGEKKSIFGDS
LFELIGIRDFQELTFSEWLDAITTFCLFEEEEILRFCFFILDREKNGYIE
KDEMRMLVNMLYNIDPVKGPTGNTKVAFDKLSVQQDGKIEFWEFELFNKA
FPSLFFPAFRLQVKMMQAVWGEAWWGRKKRQFQDRLELRRKHEEEDRLAD
ANRLEAMRQRRIKRKMGACKYFCWPCGRAEYDKMFPRANVVVADPAADEA
ERLRKQAEEKARLQREMEARYLNPETQEYKKFREKLDAKKEKENNRRDKK
PKAESRRPVKREKNADERRLRLENRRVKNGRLPPVGGVFG*
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mRNA from alignment at Ecto-sp13_S_contig13358:2062..4749-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig13358.2684.1 ID=mRNA_Ecto-sp13_S_contig13358.2684.1|Name=mRNA_Ecto-sp13_S_contig13358.2684.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2688bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13358:2062..4749- (Ectocarpus species13 EcNAP12_S_4_19m)
AAAAGCATCAAAATCTTAGATCTGAGCAACACCGATCTGGCGAAGGTGAG CTCACCACCGAAACCGAGGCCAAGACACGAAAGAAAGAGTTGTTGCCGCG GGTGTGCTCAGTTCAATCGGTCGAAACACTGCCTATAGATGACCAGTACG TCGCGAGTGCATCCTCGTCTACGTGATGGTAAAGTTGTCGCCGCGCCCAC ACATGATGACCAATAACAACGCAGGTGTTCCGGTTGTTCTGCAAGTATGA CACCGCACAGCGAGGATGCCTCAGCCTCGCAAACGTGTACAAGATGCTCG GGGAAAAAAAATCCATCTTCGGAGATAGCTTATTTGAACTCATAGGTGAG CAGTGTTCGCGCTGCAAGCGCTGGGTGTAGCTGGACTCTGGCTTGTAGCT TGCGGTTAGTTCACTGATACTACGCGACATCAACTATGCGGCTTATCTTC GATCAGACTGCATTCACACAACTCTCTTCGTGCGAGTACACATCAATATA CCACCCTGAAACTTCTGACGTGGTGTCGGAATGACAATCATAGGTATCCG GGACTTCCAGGAGCTGACGTTTTCGGAGTGGCTGGATGCAATCACGACAT TTTGTCTCTTCGAGGAGGAAGAAATCCTGCGGTTTTGCTTCTTCATCCTA GACCGAGAGAAGAACGGCTATATTGAAAAAGACGAGATGCGAATGCTAGT AAACATGCTCTACAACATTGACCCCGTCAAGGGGCCTACTGGAAACACTA AGGTGGCCTTCGACAAGCTCTCCGTGCAGCAAGATGGGAAGATCGAGTTC TGGGAGTTTGAGCTGTTCAACAAGGCGTTTCCTTCGCTGTTTTTCCCGGC TTTCCGGCTCCAGGTTAGTGAAAGTGTATGTATGTACCCACAGATTTTTC TTTATTGTGGCCTGTAAGCAATCCCATTCTGTAGTCGGCCGCTATTGGCG TACATAGGAAGGGATGCGTCATTTGGCGGTTGTAGGCCTATCAACCTACT ACGATGTACCACGGGGGGTGTAGCCTACAAGTAGAGGCCGAGGGTTCGGA AGGAAACATGAACATTGAGAAGGAAGTCCCACAATGTTTTTTGTAGCACT TTAATCTAACGGAAGGATTATAAAAACACTGTGGTGTGGAAGACACCTGT CGGAATATATAACCAACCATTTGTGCACATACAAAGTATAGGAAGATATG ATACCTCGGGGGTAACTTGCCATCGGGAGAAGTGGCAAGTAAACACCGAG GAGATTCGTCTCTTCCGAAGTCCATGGCCGATTGCCGAGGGAGGAGATGG GGAGCCTCCGGCTCTCCTCTCTCGACCCTCTGGTCACTCTTTTTCTCTAC CTCTCCCCTCGCTACATCTCACGAAAGGAAATAGCCACCCTTGGCAGTGG GAGAATACTGCAAGAGCACCGGCCTCTGTCTCTGACAGGGATCAGTGTCG TCATTGGCGTCGACGAGAACACGGCTCCGCCGTGATTTGTAGTGAGAAGG AAAACAAGAATTATAAATAGCGCGATGCCCACAAAGACCGCGCAAAAGCG AAAACTACGTGAGCGAGCCTAACAAGCGGAACAGCGCGCGGATGAGCAAA CCGCTACGCTAGCGCGTAAGGAGGAGGAGCTTGCGAGGCTCCGGCAACAG CTTTGTGGGCAGTTTCTTTCGTGTTCTCAAAATAGCCAACCAATCCCACC GCTGTGTTGACTCAAACGAAGGTAAAGATGATGCAAGCAGTGTGGGGCGA AGCTTGGTGGGGCCGGAAGAAAAGACAGTTCCAAGACAGGCTCGAGCTGA GGCGGAAGCACGAGGAGGAGGACCGGCTGGCCGATGCCAACCGGCTAGAG GCCATGCGGCAGCGGCGCATCAAACGCAAGATGGGCGCCTGCAAGTACTT CTGCTGGCCGTGCGGGCGTGCCGAGTACGACAAAATGTTTCCCAGGGCCA ACGTTGTCGTAGCCGACCCCGCGGCGGACGAAGCCGAGCGCTTGCGAAAG GTGCTTCGTAATGATTTCGCCACAAGACGTTAACATGCGTGAGACTAGAA CACGTGGGGGGGCTGCCTATACAACGCCAGCAGCAGGGTCGGTATATTTT TGACGTTTTTGCTCCAGTCCTTGTTTCAAAAAGTCGGCACCTGTGTGTGG ACTGTGTGTCCTAGGGAGGTGATGGCCCCAGAAGACCAAACCATCATGAG AACACAACGCGCACGCCTCGCTGAGTTTCACGCTGTGCTCTGTTGTAACT CGAGCGTCCGCACCGTGAAGGTAGACGTTGCGCTTGCATTTGACGGGGTG GGGGTGCGGCGCGGCTCGTCTTCCTCCGGTGAGACATGCCTACTTTCTAA ACTTGATGATCAGATTGTGCCCTCTTCGTCTGAGGACGATTTCCCGACAC TAACCGTAGTTTTCGGCCGCGCTCCCACAGCAAGCGGAGGAGAAAGCGAG GCTACAGCGAGAGATGGAGGCGCGGTATCTCAACCCGGAAACCCAGGAGT ACAAGAAGTTCAGGGAGAAGCTAGACGCCAAGAAGGAGAAGGAAAACAAC CGGCGGGACAAAAAGCCCAAGGCTGAGAGCCGTCGGCCTGTGAAGCGAGA AAAGAACGCGGACGAGAGAAGGCTGAGGTTGGAGAATCGCAGAGTCAAGA ACGGGAGGTTGCCTCCTGTGGGTGGAGTATTCGGGTGA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig13358:2062..4749-

>mRNA_Ecto-sp13_S_contig13358.2684.1 ID=mRNA_Ecto-sp13_S_contig13358.2684.1|Name=mRNA_Ecto-sp13_S_contig13358.2684.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1023bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13358:2062..4749- (Ectocarpus species13 EcNAP12_S_4_19m)
AAAAGCATCAAAATCTTAGATCTGAGCAACACCGATCTGGCGAAGGTGTT
CCGGTTGTTCTGCAAGTATGACACCGCACAGCGAGGATGCCTCAGCCTCG
CAAACGTGTACAAGATGCTCGGGGAAAAAAAATCCATCTTCGGAGATAGC
TTATTTGAACTCATAGGTATCCGGGACTTCCAGGAGCTGACGTTTTCGGA
GTGGCTGGATGCAATCACGACATTTTGTCTCTTCGAGGAGGAAGAAATCC
TGCGGTTTTGCTTCTTCATCCTAGACCGAGAGAAGAACGGCTATATTGAA
AAAGACGAGATGCGAATGCTAGTAAACATGCTCTACAACATTGACCCCGT
CAAGGGGCCTACTGGAAACACTAAGGTGGCCTTCGACAAGCTCTCCGTGC
AGCAAGATGGGAAGATCGAGTTCTGGGAGTTTGAGCTGTTCAACAAGGCG
TTTCCTTCGCTGTTTTTCCCGGCTTTCCGGCTCCAGGTAAAGATGATGCA
AGCAGTGTGGGGCGAAGCTTGGTGGGGCCGGAAGAAAAGACAGTTCCAAG
ACAGGCTCGAGCTGAGGCGGAAGCACGAGGAGGAGGACCGGCTGGCCGAT
GCCAACCGGCTAGAGGCCATGCGGCAGCGGCGCATCAAACGCAAGATGGG
CGCCTGCAAGTACTTCTGCTGGCCGTGCGGGCGTGCCGAGTACGACAAAA
TGTTTCCCAGGGCCAACGTTGTCGTAGCCGACCCCGCGGCGGACGAAGCC
GAGCGCTTGCGAAAGCAAGCGGAGGAGAAAGCGAGGCTACAGCGAGAGAT
GGAGGCGCGGTATCTCAACCCGGAAACCCAGGAGTACAAGAAGTTCAGGG
AGAAGCTAGACGCCAAGAAGGAGAAGGAAAACAACCGGCGGGACAAAAAG
CCCAAGGCTGAGAGCCGTCGGCCTGTGAAGCGAGAAAAGAACGCGGACGA
GAGAAGGCTGAGGTTGGAGAATCGCAGAGTCAAGAACGGGAGGTTGCCTC
CTGTGGGTGGAGTATTCGGGTGA
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