prot_Ecto-sp13_S_contig13358.2682.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13358.2682.1
Unique Nameprot_Ecto-sp13_S_contig13358.2682.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length64
Homology
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BLAST of mRNA_Ecto-sp13_S_contig13358.2682.1 vs. uniprot
Match: D7G2J2_ECTSI (PPIase cyclophilin-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2J2_ECTSI)

HSP 1 Score: 72.8 bits (177), Expect = 1.300e-13
Identity = 31/44 (70.45%), Postives = 36/44 (81.82%), Query Frame = 0 
Query:   21 QVGRERENDTWCGATSRNEVNPPESSLTPHPPCPRCSCRVVSPY 64
            +VGRERE+DTWCGATSR EV PP+ +LT +PPCPRCSC   S Y
Sbjct:  138 KVGRERESDTWCGATSRTEVKPPDLNLTAYPPCPRCSCGGESIY 181
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13358.2682.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G2J2_ECTSI1.300e-1370.45PPIase cyclophilin-type domain-containing protein ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13358contigEcto-sp13_S_contig13358:68..259 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13358.2682.1mRNA_Ecto-sp13_S_contig13358.2682.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13358 68..260 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13358.2682.1 ID=prot_Ecto-sp13_S_contig13358.2682.1|Name=mRNA_Ecto-sp13_S_contig13358.2682.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=64bp
VFSPCPSFSHSLYLPCLISVQVGRERENDTWCGATSRNEVNPPESSLTPH
PPCPRCSCRVVSPY
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