mRNA_Ecto-sp13_S_contig1335.2679.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1335.2679.1 vs. uniprot
Match: A0A6H5K292_9PHAE (SASA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K292_9PHAE) HSP 1 Score: 905 bits (2339), Expect = 0.000e+0 Identity = 444/484 (91.74%), Postives = 455/484 (94.01%), Query Frame = 2
Query: 5 MCFNARGDWGPAVEPLHRDIDLRKQHRCGVGPSLVCVCTLLELRKAYLS--PQSPTIGLVPCAIGGASLDEWQKNYEGEVGDCELPARHGEVQGNQPWGYKPGSKNLFGAMSARVDEALKAAPEGSHLGGMLWYQGETDAAKEDRAETYGDRFQTLIEDVRGLGYPDLNIFTVAVTGTTARLPYLQRVRDAQLFAGSPMGIAGVWVTDAFGLPMFPDGLHLVTKAQVELGERMALQIFTTTAASAPGRENARAATDDPTRDWAIEDERVRKAANDLSCIVASTKSKSASKDGPISQVHFRSFAKLLFFLEPRPTPDDRLLVLGYGTGVCVLAAALLYDLRRIQGICAAEGGIDEAHTLLSVYSGGTPAVASGPDEQEGPKSSLTPPSNIDLLEGEVAEARWDDATLVYAASCNFDENVMLDVARRCRGSKDCRRVITLGKPLPPVQLRQGEEGAVVNGEFKVVWQCQVEGYRGDTTVAFVHHRV 1450
MCFNARGDWGPAVEPLHRDIDLRKQHRCGVGPSLVC C LLELRKAY S PQSPTIGLVPCAIGGASLDEWQKNYEG+VGDCELPARHG VQGNQPWGYKPGSKNLFGAMSARVDEALKAAPEGSHLGGMLWYQGETDAA EDRAETYGDRFQTLIEDVRGLGYPDLNIFTVAVTGTTARLP+LQ+VRDAQLFAGS GIAGVWVTD FGLPMFPDGLHLVTKAQVELGERMALQIFT TAASAP RENARAATD PTRDWAIED RVRKA NDLS IVA+TKSKSASKDGPI+QVHFRSFAKLLFFLEPRP+PDDRLLVLGYG GVC L AALLY+LR IQGIC AEGGIDEAHTL YSGGTPAVASG DEQEGPK SLTPPSNIDLLEG+VAEARWDDATLVYAASCNFDENVMLDVARRCR SKDCRRVITLGKPLP VQLRQGE+GA+VNGEFKV+WQCQVEGYRG TTVAFVHHRV
Sbjct: 1 MCFNARGDWGPAVEPLHRDIDLRKQHRCGVGPSLVCACALLELRKAYSSRSPQSPTIGLVPCAIGGASLDEWQKNYEGKVGDCELPARHGGVQGNQPWGYKPGSKNLFGAMSARVDEALKAAPEGSHLGGMLWYQGETDAANEDRAETYGDRFQTLIEDVRGLGYPDLNIFTVAVTGTTARLPFLQQVRDAQLFAGSSTGIAGVWVTDTFGLPMFPDGLHLVTKAQVELGERMALQIFTATAASAPRRENARAATDGPTRDWAIEDARVRKAENDLSFIVAATKSKSASKDGPIAQVHFRSFAKLLFFLEPRPSPDDRLLVLGYGAGVCALTAALLYNLRLIQGICTAEGGIDEAHTLFPAYSGGTPAVASGSDEQEGPKLSLTPPSNIDLLEGDVAEARWDDATLVYAASCNFDENVMLDVARRCRLSKDCRRVITLGKPLPAVQLRQGEKGAIVNGEFKVLWQCQVEGYRGGTTVAFVHHRV 484
BLAST of mRNA_Ecto-sp13_S_contig1335.2679.1 vs. uniprot
Match: D7FSD3_ECTSI (SASA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSD3_ECTSI) HSP 1 Score: 695 bits (1794), Expect = 1.810e-246 Identity = 349/374 (93.32%), Postives = 353/374 (94.39%), Query Frame = 2
Query: 329 MSARVDEALKAAPEGSHLGGMLWYQGETDAAKEDRAETYGDRFQTLIEDVRGLGYPDLNIFTVAVTGTTARLPYLQRVRDAQLFAGSPMGIAGVWVTDAFGLPMFPDGLHLVTKAQVELGERMALQIFTTTAASAPGRENARAATDDPTRDWAIEDERVRKAANDLSCIVASTKSKSASKDGPISQVHFRSFAKLLFFLEPRPTPDDRLLVLGYGTGVCVLAAALLYDLRRIQGICAAEGGIDEAHTLLSVYSGGTPAVASGPDEQEGPKSSLTPPSNIDLLEGEVAEARWDDATLVYAASCNFDENVMLDVARRCRGSKDCRRVITLGKPLPPVQLRQGEEGAVVNGEFKVVWQCQVEGYRGDTTVAFVHHRV 1450
MSARVDEALKAAPEGSHLGGMLWYQGETDAAKEDRAETYGDRFQTLIEDVRGLGYPDLNIFTVAVTGTTARLPYLQ+VRDAQLFAGS GIAGVWVTD FGLPMFPDGLHLVTKAQVELGERMALQIFT TAASAP RENARAATDDPTR WAIED RV A NDLSCIVA+TKSKSASKDG ISQVHFRSFAKLLFFLEPRPTPDDRLLVLGYG GVCVL AALLY LR+IQGICAAEGGIDEAHTL VYSGGTPAVASG DEQEGPKSSLTPPSNIDLLEGEVAEARWDDATLVYAASCNFDENVMLDVARRCRGS+DCRRVITLGKPLP VQLRQ EEG VVNGEFKVVWQCQVEGYRG TTVAFVHHRV
Sbjct: 1 MSARVDEALKAAPEGSHLGGMLWYQGETDAAKEDRAETYGDRFQTLIEDVRGLGYPDLNIFTVAVTGTTARLPYLQQVRDAQLFAGSSTGIAGVWVTDTFGLPMFPDGLHLVTKAQVELGERMALQIFTATAASAPERENARAATDDPTRGWAIEDARVSNAENDLSCIVAATKSKSASKDGTISQVHFRSFAKLLFFLEPRPTPDDRLLVLGYGAGVCVLTAALLYSLRQIQGICAAEGGIDEAHTLFPVYSGGTPAVASGSDEQEGPKSSLTPPSNIDLLEGEVAEARWDDATLVYAASCNFDENVMLDVARRCRGSRDCRRVITLGKPLPAVQLRQREEGTVVNGEFKVVWQCQVEGYRGGTTVAFVHHRV 374
BLAST of mRNA_Ecto-sp13_S_contig1335.2679.1 vs. uniprot
Match: A0A4Y7IKN1_PAPSO (SASA domain-containing protein n=1 Tax=Papaver somniferum TaxID=3469 RepID=A0A4Y7IKN1_PAPSO) HSP 1 Score: 137 bits (345), Expect = 1.970e-32 Identity = 92/246 (37.40%), Postives = 115/246 (46.75%), Query Frame = 2
Query: 2 VMCFNARGDWGPAVEPLHRDIDLRKQHRCGVGPSLVCVCTLLELRKAYLSPQSPTIGLVPCAIGGASLDEWQKNYEGEVGDCELPARHGEVQGNQPWGYKPGSKNLFGAMSARVDEALKAAPEGSHLGGMLWYQGETDAAKEDRAETYGDRFQTLIEDVRG-LGYPDLNIFTVAVTGTTARLPYLQRVRDAQLFAGSPMGIAGVWVTDAFGLPMFPDGLHLVTKAQVELGERMALQIFTTTAASAP 736
++ FN+ W A EPLH DID K CGVGP +V TLL++ + TIGLVPCAIGG + EW + L+ + R +L + EG + G+LWYQGE+D AE+YGD + I D R L P L VA+ T PY VR AQL M + VW DA GLP+ PDG+HL T+AQV LG A FT A P
Sbjct: 76 IIRFNSHHRWVEAQEPLHIDIDFNKT--CGVGPGMVFANTLLQMMDSRT-----TIGLVPCAIGGTRISEWDRGTR-----------------------------LYNMLITR---SLLSLMEGGRILGVLWYQGESDTVSPTDAESYGDNLKKFISDFRADLHLPLLPFIQVALASTEG--PYKGIVRKAQL----EMDLPNVWTVDADGLPLGPDGIHLSTRAQVRLGRMFAEGYFTRNAHRKP 276
BLAST of mRNA_Ecto-sp13_S_contig1335.2679.1 vs. uniprot
Match: UPI0005D39D0C (probable carbohydrate esterase At4g34215 n=1 Tax=Amborella trichopoda TaxID=13333 RepID=UPI0005D39D0C) HSP 1 Score: 130 bits (327), Expect = 3.410e-30 Identity = 86/234 (36.75%), Postives = 118/234 (50.43%), Query Frame = 2
Query: 2 VMCFNARGDWGPAVEPLHRDIDLRKQHRCGVGPSLVCVCTLLELRKAYLSPQSPTIGLVPCAIGGASLDEWQKNYEGEVGDCELPARHGEVQGNQPWGYKPGSKNLFGAMSARVDEALKAAPEGSHLGGMLWYQGETDAAKEDRAETYGDRFQTLIEDVR-GLGYPDLNIFTVAVTGTTARLPYLQRVRDAQLFAGSPMGIAGVWVTDAFGLPMFPDGLHLVTKAQVELGERMA 700
++ N+ W A EPLHRDID K CGVGP++ LL + SP IGLVPCAIGG ++ +W++ +L+ AM +R KAA GS + G+LWYQGE+D AE YG + ++ + DVR L P+L I VA+ T PY+ VR+AQL M + V+ DA GL + D LHL T +QV+LG+ +A
Sbjct: 50 ILRLNSGLCWELAKEPLHRDIDTSKT--CGVGPAMSFAHALLN--SSSPSPSRVPIGLVPCAIGGTAIQQWERG-----------------------------SHLYKAMISRA----KAAARGSAIEGILWYQGESDTESRQAAEAYGRKMESFVRDVRLDLQLPNLPIIQVALASGTE--PYMDIVREAQL----GMHLPHVFCVDAKGLQLKKDNLHLTTPSQVQLGKMLA 240
BLAST of mRNA_Ecto-sp13_S_contig1335.2679.1 vs. uniprot
Match: M1DHN0_SOLTU (Hydrolase n=1 Tax=Solanum tuberosum TaxID=4113 RepID=M1DHN0_SOLTU) HSP 1 Score: 127 bits (320), Expect = 9.800e-30 Identity = 86/231 (37.23%), Postives = 117/231 (50.65%), Query Frame = 2
Query: 11 FNARGDWGPAVEPLHRDIDLRKQHRCGVGPSLVCVCTLLELRKAYLSPQSPTIGLVPCAIGGASLDEWQKNYEGEVGDCELPARHGEVQGNQPWGYKPGSKNLFGAMSARVDEALKAAPEGSHLGGMLWYQGETDAAKEDRAETYGDRFQTLIEDVRG-LGYPDLNIFTVAVTGTTARLPYLQRVRDAQLFAGSPMGIAGVWVTDAFGLPMFPDGLHLVTKAQVELGERMA 700
N W A EPLH DID K CG+GP++V +LE+ PQ IGLVPCAIGG S+D+W + GS+ L+ M R AL+ +G + G+LWYQGE DA +A++Y + + L DVR L P L IF VA+ P+++ VR+AQL + + V DA GLP+ D LHL T+AQV+LG ++A
Sbjct: 29 LNGNSIWEVAQEPLHEDIDFNKT--CGIGPTMVFANIVLEM-----DPQFGKIGLVPCAIGGTSIDKWSQ----------------------------GSR-LYNDMIKRARIALQ---DGGTIQGILWYQGERDALTLKKAKSYKRKLEKLFGDVRNDLNSPLLPIFQVALASGEG--PFMEEVREAQL----GINLDNVITVDALGLPLEQDALHLTTQAQVQLGYKLA 214
BLAST of mRNA_Ecto-sp13_S_contig1335.2679.1 vs. uniprot
Match: A0A7I4D455_PHYPA (SASA domain-containing protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A7I4D455_PHYPA) HSP 1 Score: 128 bits (321), Expect = 9.020e-29 Identity = 86/231 (37.23%), Postives = 112/231 (48.48%), Query Frame = 2
Query: 2 VMCFNARGDWGPAVEPLHRDIDLRKQHRCGVGPSLVCVCTLLELRKAYLSPQSPTIGLVPCAIGGASLDEWQKNYEGEVGDCELPARHGEVQGNQPWGYKPGSKNLFGAMSARVDEALKAAPEGSHLGGMLWYQGETDAAKEDRAETYGDRFQTLIEDVR-GLGYPDLNIFTVAVTGTTARLP-YLQRVRDAQLFAGSPMGIAGVWVTDAFGLPMFPDGLHLVTKAQVELG 688
++ N +W A EP H DID K CGVGP LV +LL RK + P P IGLVPCAIGG S+ +W+K G V L+ M R AL+ +G L +LWYQGE+DA ++ A+ Y R T VR L +L I VA+ A P Y+ +VR AQ A + + + DA GLP+ D +HL T+AQ ELG
Sbjct: 127 ILRLNKNLEWEEAHEPTHIDIDTSKA--CGVGPGLVFAASLLRARKYKVKPTGPQIGLVPCAIGGTSIVQWEK---------------GRV--------------LYNHMIQRTKAALE---KGGTLKALLWYQGESDAVEKSLADHYEQRLVTFFNHVRTDLNNHNLPIIQVAINWPAAPHPEYVNKVRSAQRAALDH--VKHLHLVDALGLPLLSDHIHLTTEAQTELG 321
BLAST of mRNA_Ecto-sp13_S_contig1335.2679.1 vs. uniprot
Match: UPI001FB113F3 (probable carbohydrate esterase At4g34215 n=1 Tax=Impatiens glandulifera TaxID=253017 RepID=UPI001FB113F3) HSP 1 Score: 127 bits (319), Expect = 9.220e-29 Identity = 79/234 (33.76%), Postives = 115/234 (49.15%), Query Frame = 2
Query: 2 VMCFNARGDWGPAVEPLHRDIDLRKQHRCGVGPSLVCVCTLLELRKAYLSPQSPTIGLVPCAIGGASLDEWQKNYEGEVGDCELPARHGEVQGNQPWGYKPGSKNLFGAMSARVDEALKAAPEGSHLGGMLWYQGETDAAKEDRAETYGDRFQTLIEDVRG-LGYPDLNIFTVAVTGTTARLPYLQRVRDAQLFAGSPMGIAGVWVTDAFGLPMFPDGLHLVTKAQVELGERMA 700
+ FNA +W A EPLH DID+R CG+GP L ++L +P T+GLVPCA+GG ++ +W+K L+ M R A G+ + G+LWYQGE+D ++ +E Y + + ++R L P L I VA+ Y++ +R+AQ GS + A + + DA GLP+ PDGLHL T+AQV LGE +A
Sbjct: 67 IYRFNAGLEWEQANEPLHWDIDIRNNKTCGIGPGLAFANSILSR-----NPNLETVGLVPCAVGGTNISQWEKG-----------------------------SFLYNQMIRRTLAAXXXXXXGA-IRGVLWYQGESDTKEKKDSELYKGKLKMFFINLRSDLQNPFLPIIQVALASGEGH--YVKEIREAQFSVGSEL--ANIRIVDAKGLPLNPDGLHLSTQAQVRLGEMLA 261
BLAST of mRNA_Ecto-sp13_S_contig1335.2679.1 vs. uniprot
Match: A0A4P1QY68_LUPAN (SASA domain-containing protein n=1 Tax=Lupinus angustifolius TaxID=3871 RepID=A0A4P1QY68_LUPAN) HSP 1 Score: 122 bits (306), Expect = 9.240e-28 Identity = 81/234 (34.62%), Postives = 114/234 (48.72%), Query Frame = 2
Query: 2 VMCFNARGDWGPAVEPLHRDIDLRKQHRCGVGPSLVCVCTLLELRKAYLSPQSPTIGLVPCAIGGASLDEWQKNYEGEVGDCELPARHGEVQGNQPWGYKPGSKNLFGAMSARVDEALKAAPEGSHLGGMLWYQGETDAAKEDRAETYGDRFQTLIEDVRG-LGYPDLNIFTVAVTGTTARLPYLQRVRDAQLFAGSPMGIAGVWVTDAFGLPMFPDGLHLVTKAQVELGERMA 700
++ NA +W A EPLH+DID +K + GVGP + ++L R+ + +GLVPCAIGG ++ +W+K K L+ M RV +L +G + G LWYQGE+D + A++Y R DVR L P L I VA+ + + PY VR AQ + + + DA GLP+ PDGLHL T+AQV LG+ MA
Sbjct: 32 ILRLNAELEWVEAQEPLHQDIDAKKTN--GVGPGMSFANSILNKREGF-----GVVGLVPCAIGGTNISQWEKG-----------------------------KVLYKHMMKRVKASLN---DGGSIRGFLWYQGESDTVNLNDAQSYQTRIHKFFIDVRNDLQSPLLPIIQVALA--SGQGPYKDIVRQAQ----QSIDLLNLRTVDALGLPLEPDGLHLTTQAQVNLGQMMA 220
BLAST of mRNA_Ecto-sp13_S_contig1335.2679.1 vs. uniprot
Match: A0A445C8A5_ARAHY (SASA domain-containing protein n=3 Tax=Arachis TaxID=3817 RepID=A0A445C8A5_ARAHY) HSP 1 Score: 123 bits (308), Expect = 3.900e-27 Identity = 84/234 (35.90%), Postives = 116/234 (49.57%), Query Frame = 2
Query: 2 VMCFNARGDWGPAVEPLHRDIDLRKQHRCGVGPSLVCVCTLLELRKAYLSPQSPTIGLVPCAIGGASLDEWQKNYEGEVGDCELPARHGEVQGNQPWGYKPGSKNLFGAMSARVDEALKAAPEGSHLGGMLWYQGETDAAKEDRAETYGDRFQTLIEDVRG-LGYPDLNIFTVAVTGTTARLPYLQRVRDAQLFAGSPMGIAGVWVTDAFGLPMFPDGLHLVTKAQVELGERMA 700
++ NA+ +W A EPLH DID+ K + GVGP + T+LE R + +GLVPCAIGG ++ EW++ G+V + M RV +L+ G L +LWYQGE+D A++Y R D+R L P L I VA+ PY++ VR+AQL M + + DA GLP+ PDGLHL T+AQV LG+ MA
Sbjct: 85 ILRLNAKLEWVEAEEPLHADIDVTKTN--GVGPGMAFANTILEKRPGF-----GVVGLVPCAIGGTNISEWER---------------GKVH--------------YTRMMKRVKASLQG---GGGLQALLWYQGESDTLLLSDAQSYRTRLGKFFLDLRADLNSPLLPIVQVALASGEG--PYIETVREAQL----DMDLLNLRTVDAKGLPLGPDGLHLTTQAQVHLGQVMA 273
BLAST of mRNA_Ecto-sp13_S_contig1335.2679.1 vs. uniprot
Match: A0A1S3WZI5_TOBAC (probable carbohydrate esterase At4g34215 n=1 Tax=Nicotiana tabacum TaxID=4097 RepID=A0A1S3WZI5_TOBAC) HSP 1 Score: 124 bits (310), Expect = 4.800e-27 Identity = 82/234 (35.04%), Postives = 113/234 (48.29%), Query Frame = 2
Query: 2 VMCFNARGDWGPAVEPLHRDIDLRKQHRCGVGPSLVCVCTLLELRKAYLSPQSPTIGLVPCAIGGASLDEWQKNYEGEVGDCELPARHGEVQGNQPWGYKPGSKNLFGAMSARVDEALKAAPEGSHLGGMLWYQGETDAAKEDRAETYGDRFQTLIEDVRG-LGYPDLNIFTVAVTGTTARLPYLQRVRDAQLFAGSPMGIAGVWVTDAFGLPMFPDGLHLVTKAQVELGERMA 700
++ N W A EPLH DIDL K CG+GP++V +LE P+ IGLVPCA GG S+D+W + +L+ M R A+ G + +LWYQGE D + A++Y + + L +D+R L P L IF VA+ R +++ VR+AQL P V DA GLP+ PDGLHL T AQV+LG ++A
Sbjct: 26 ILRLNGNSIWEVAQEPLHYDIDLNKT--CGIGPTMVFANDILEK-----DPEFGIIGLVPCAAGGTSIDKWSQG-----------------------------SSLYNEMIKRARIAVYG---GGTIRAILWYQGERDTLTWEEAKSYKSKLEKLCQDLRSDLNSPLLPIFQVALASGQGR--FIEGVREAQLGINLP----NVITVDALGLPLEPDGLHLSTPAQVQLGYKLA 214 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1335.2679.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1335.2679.1 >prot_Ecto-sp13_S_contig1335.2679.1 ID=prot_Ecto-sp13_S_contig1335.2679.1|Name=mRNA_Ecto-sp13_S_contig1335.2679.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=483bp MCFNARGDWGPAVEPLHRDIDLRKQHRCGVGPSLVCVCTLLELRKAYLSPback to top mRNA from alignment at Ecto-sp13_S_contig1335:6352..16060- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1335.2679.1 ID=mRNA_Ecto-sp13_S_contig1335.2679.1|Name=mRNA_Ecto-sp13_S_contig1335.2679.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=9709bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1335:6352..16060- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1335:6352..16060- >mRNA_Ecto-sp13_S_contig1335.2679.1 ID=mRNA_Ecto-sp13_S_contig1335.2679.1|Name=mRNA_Ecto-sp13_S_contig1335.2679.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1449bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1335:6352..16060- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |