prot_Ecto-sp13_S_contig1024.267.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1024.267.1
Unique Nameprot_Ecto-sp13_S_contig1024.267.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length221
Homology
BLAST of mRNA_Ecto-sp13_S_contig1024.267.1 vs. uniprot
Match: D7FRD4_ECTSI (Retinitis pigmentosa 2 (X-linked recessive) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRD4_ECTSI)

HSP 1 Score: 280 bits (716), Expect = 3.750e-90
Identity = 146/194 (75.26%), Postives = 153/194 (78.87%), Query Frame = 0
Query:   27 AAAREGNVTRGTVDKGNLNPSDFIFSRKQKEVIVREPGSIGGQQFIVEECSECEVYLLDHTAALTIDLCTDCRIIVGPCESRQDTPLFLKRFSKKNSSVFIRDCKDCTMVVACQQFRARXXXXXTFFLFSATQPVIESSVGLRFACYTLDYFSLAGQFAAAKLSVWNNKWSQIYNFTGGGEGDWSCLPEGSHHR 220
            AAA  G++TRG +DKGNLNPSDFIFS KQKEVIVREPGSIGGQQFIVEECSECEVYLLDHTAALTIDLC       GPC                            T+VVACQQFRAR XXXXTFFLFSATQPVIESSVGLRF CYTLDYFSLAGQFAAAKLSVWNN+WSQI+NFTGGG+GDWSCLPEGSHHR
Sbjct:   22 AAAGGGSLTRGALDKGNLNPSDFIFSCKQKEVIVREPGSIGGQQFIVEECSECEVYLLDHTAALTIDLCXXXXXXXGPCXXXXXXXXXXXX----------------TVVVACQQFRARDXXXXTFFLFSATQPVIESSVGLRFGCYTLDYFSLAGQFAAAKLSVWNNRWSQIHNFTGGGDGDWSCLPEGSHHR 199          
BLAST of mRNA_Ecto-sp13_S_contig1024.267.1 vs. uniprot
Match: A0A6H5J9Z2_9PHAE (C-CAP/cofactor C-like domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9Z2_9PHAE)

HSP 1 Score: 181 bits (460), Expect = 1.000e-54
Identity = 104/151 (68.87%), Postives = 106/151 (70.20%), Query Frame = 0
Query:   28 AAREGNVTRGTVDKGNLNPSDFIFSRKQKEVIVREPGSIGGQQFIVEECSECEVYLLDHTAALTIDLCTDCRIIVGPCESRQDTPLFLKRFSKKNSSVFIRDCKDCTMVVACQQFRARXXXXXTFFLFSATQPVIESSVGLRFACYTLDYF 178
            AA  G+VTRGTVDKGNLNPSDFIFSRKQKEVIVREPGSIGGQQFIVEECSECEVYLLDHTAALTIDL                                          VACQQFRAR XXXXTFFLFSATQPV+ESSVGLRFACYTLDYF
Sbjct:   23 AAGGGSVTRGTVDKGNLNPSDFIFSRKQKEVIVREPGSIGGQQFIVEECSECEVYLLDHTAALTIDL----------------XXXXXXXXXXXXXXXXXXXXXXXXXXVACQQFRARDXXXXTFFLFSATQPVVESSVGLRFACYTLDYF 157          
BLAST of mRNA_Ecto-sp13_S_contig1024.267.1 vs. uniprot
Match: G4ZD48_PHYSP (Protein XRP2 n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZD48_PHYSP)

HSP 1 Score: 174 bits (442), Expect = 1.610e-49
Identity = 87/176 (49.43%), Postives = 111/176 (63.07%), Query Frame = 0
Query:   44 LNPSDFIFSRKQK-EVIVREPGSIGGQQFIVEECSECEVYLLDHTAALTIDLCTDCRIIVGPCESRQDTPLFLKRFSKKNSSVFIRDCKDCTMVVACQQFRARXXXXXTFFLFSATQPVIESSVGLRFACYTLDYFSLAGQFAAAKLSVWNNKWSQIYNFTGGGEGDWSCLPEGSH 218
            L   DFIFS  Q    + + PGSI GQQF++E+C  C+++LLDH  ++ ID C +CRI+VGPCES                SVF+RDCK CT+V A QQFR R       +L+SAT+P+IE+S  LRFAC+ L YFSL  QF  AK S WNNKWS+I++FT    G W+ LP   H
Sbjct:   47 LKREDFIFSNIQTASFLAKLPGSINGQQFLIEDCHNCDIFLLDHCTSVQIDACVNCRIVVGPCES----------------SVFLRDCKKCTVVCAAQQFRTRDCEDLDVYLYSATEPIIETSSRLRFACFPLTYFSLQQQFRQAKFSAWNNKWSEIFDFTPD-HGGWTPLPMHPH 205          
BLAST of mRNA_Ecto-sp13_S_contig1024.267.1 vs. uniprot
Match: V9G2C2_PHYPR (Protein XRP2 n=8 Tax=Phytophthora parasitica TaxID=4792 RepID=V9G2C2_PHYPR)

HSP 1 Score: 174 bits (441), Expect = 2.670e-49
Identity = 87/176 (49.43%), Postives = 112/176 (63.64%), Query Frame = 0
Query:   44 LNPSDFIFSRKQK-EVIVREPGSIGGQQFIVEECSECEVYLLDHTAALTIDLCTDCRIIVGPCESRQDTPLFLKRFSKKNSSVFIRDCKDCTMVVACQQFRARXXXXXTFFLFSATQPVIESSVGLRFACYTLDYFSLAGQFAAAKLSVWNNKWSQIYNFTGGGEGDWSCLPEGSH 218
            L   DFIFS  Q    + + PGSI GQQF++E+C  C+++LLDH  ++ ID C +CRI+VGPCES                SVF+R+CK CT+V A QQFRAR     + +L+SAT+P+IE S GLRFAC+ L YFSL  QF  AK S WNNKWS++++FT    G W  LP   H
Sbjct:   41 LKREDFIFSNIQTASFLAKLPGSINGQQFLIEDCHNCDIFLLDHCTSVQIDACINCRIVVGPCES----------------SVFLRNCKRCTVVCAVQQFRARDCEDVSVYLYSATEPIIEMSSGLRFACFPLTYFSLQQQFRQAKFSPWNNKWSELFDFTPD-HGGWKPLPMRPH 199          
BLAST of mRNA_Ecto-sp13_S_contig1024.267.1 vs. uniprot
Match: A0A329T3Q5_9STRA (Protein XRP2 n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329T3Q5_9STRA)

HSP 1 Score: 174 bits (441), Expect = 2.800e-49
Identity = 98/226 (43.36%), Postives = 127/226 (56.19%), Query Frame = 0
Query:    1 MGNL-------FGKDCPEQKKTKKHGAGVGWNPAAAREGNVTRGTVDKGNLNPSDFIFSRKQK-EVIVREPGSIGGQQFIVEECSECEVYLLDHTAALTIDLCTDCRIIVGPCESRQDTPLFLKRFSKKNSSVFIRDCKDCTMVVACQQFRARXXXXXTFFLFSATQPVIESSVGLRFACYTLDYFSLAGQFAAAKLSVWNNKWSQIYNFTGGGEGDWSCLPEGSH 218
            MGN+        G D   + K+K   A  G + AA   G           L   DFIFS  Q    + + PGSI GQQF++E+C  C+++LLDH  ++ ID C +CRI+VGPCES                SVF+R+CK CT+V A QQFR R     + +L+SAT+P+IE+S GLRFAC+ L YFSL  QF   K S WNNKWS+I++FT    G W  LP   H
Sbjct:    1 MGNICHAGPPALGADAKPRSKSKSR-ASTGSSKAAPTFGKDP-------TLKREDFIFSNIQTASFLAKLPGSINGQQFLIEDCHNCDIFLLDHCTSVQIDACVNCRIVVGPCES----------------SVFLRNCKRCTVVCAVQQFRTRDCEDVSVYLYSATEPIIETSSGLRFACFPLTYFSLQQQFRQVKFSPWNNKWSEIFDFTPD-HGGWKPLPMRPH 201          
BLAST of mRNA_Ecto-sp13_S_contig1024.267.1 vs. uniprot
Match: A0A2D4BH13_PYTIN (XRP2-like protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BH13_PYTIN)

HSP 1 Score: 173 bits (439), Expect = 4.190e-49
Identity = 83/176 (47.16%), Postives = 110/176 (62.50%), Query Frame = 0
Query:   44 LNPSDFIFSRKQKEVIVRE-PGSIGGQQFIVEECSECEVYLLDHTAALTIDLCTDCRIIVGPCESRQDTPLFLKRFSKKNSSVFIRDCKDCTMVVACQQFRARXXXXXTFFLFSATQPVIESSVGLRFACYTLDYFSLAGQFAAAKLSVWNNKWSQIYNFTGGGEGDWSCLPEGSH 218
            L   D+IFS       + + PGSI GQQF++E CSEC++++LDH  A+ ID C +CRI++GPCES                S+F+R+CK CT+V A QQFR R       +L+S+T+P+IESS  +RFACY + YFSL  QF  AK SVWNN+WS++YNFT    G W  L    H
Sbjct:   39 LKKEDYIFSNIHAPTFLAKLPGSINGQQFLIENCSECDIFVLDHCTAVQIDDCVNCRIVIGPCES----------------SLFLRNCKQCTIVCAVQQFRTRDCEDIDVYLYSSTEPIIESSTRMRFACYPMTYFSLQHQFDQAKFSVWNNRWSEVYNFTPD-HGSWKALSTSCH 197          
BLAST of mRNA_Ecto-sp13_S_contig1024.267.1 vs. uniprot
Match: A0A8K1FEW1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FEW1_PYTOL)

HSP 1 Score: 171 bits (434), Expect = 1.970e-48
Identity = 81/176 (46.02%), Postives = 114/176 (64.77%), Query Frame = 0
Query:   44 LNPSDFIFSRKQK-EVIVREPGSIGGQQFIVEECSECEVYLLDHTAALTIDLCTDCRIIVGPCESRQDTPLFLKRFSKKNSSVFIRDCKDCTMVVACQQFRARXXXXXTFFLFSATQPVIESSVGLRFACYTLDYFSLAGQFAAAKLSVWNNKWSQIYNFTGGGEGDWSCLPEGSH 218
            L   DFIFS  Q    +V+ PGS+ GQQF++E C +C++++LDH  ++ ID C +CRI++GPC                N+S+F+R+C+DCT+V A QQFR R       +L+SAT+P+IE+S  +RFAC+ L YF+L  QF AAK SVWNN+WS+IYNFT    G W  +   +H
Sbjct:   32 LKREDFIFSNVQSASFLVKLPGSVNGQQFLIEACRDCDIFVLDHCTSVQIDDCVNCRIVIGPC----------------NASLFLRNCRDCTLVCAVQQFRTRDCEKIDVYLYSATEPIIETSSQMRFACFPLAYFNLQQQFDAAKFSVWNNRWSEIYNFTPE-HGAWKAISTQTH 190          
BLAST of mRNA_Ecto-sp13_S_contig1024.267.1 vs. uniprot
Match: A0A2P4YDP5_9STRA (Protein XRP2 n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YDP5_9STRA)

HSP 1 Score: 171 bits (433), Expect = 3.270e-48
Identity = 86/176 (48.86%), Postives = 108/176 (61.36%), Query Frame = 0
Query:   44 LNPSDFIFSRKQK-EVIVREPGSIGGQQFIVEECSECEVYLLDHTAALTIDLCTDCRIIVGPCESRQDTPLFLKRFSKKNSSVFIRDCKDCTMVVACQQFRARXXXXXTFFLFSATQPVIESSVGLRFACYTLDYFSLAGQFAAAKLSVWNNKWSQIYNFTGGGEGDWSCLPEGSH 218
            L   DFIFS  Q    + + PGSI GQQF++EEC  C+++LLDH  ++ ID C +CRI+VGPCES                SVF+R+CK CT++ A QQFR R       +L+S T P+IE+S  LRFAC+ L YFSL  QF  AK S WNNKWS+I+NFT    G W  LP   H
Sbjct:   44 LKREDFIFSNIQTASFLAKLPGSINGQQFLIEECHNCDIFLLDHCTSVQIDACVNCRIVVGPCES----------------SVFLRNCKRCTVICAVQQFRTRDCEDVDVYLYSVTDPIIETSSRLRFACFPLTYFSLQQQFRQAKFSPWNNKWSEIFNFTPD-HGGWKPLPMHPH 202          
BLAST of mRNA_Ecto-sp13_S_contig1024.267.1 vs. uniprot
Match: A0A6A4FTT6_9STRA (Protein XRP2 n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A4FTT6_9STRA)

HSP 1 Score: 169 bits (429), Expect = 1.780e-47
Identity = 87/176 (49.43%), Postives = 110/176 (62.50%), Query Frame = 0
Query:   44 LNPSDFIFSRKQK-EVIVREPGSIGGQQFIVEECSECEVYLLDHTAALTIDLCTDCRIIVGPCESRQDTPLFLKRFSKKNSSVFIRDCKDCTMVVACQQFRARXXXXXTFFLFSATQPVIESSVGLRFACYTLDYFSLAGQFAAAKLSVWNNKWSQIYNFTGGGEGDWSCLPEGSH 218
            L   DFIFS  Q    + + PGSI GQQF++E+C  C+++LLDH  ++ ID C +CR++VGPCES                SVF+RDCK CT+V   QQFRA        FL+SAT+PVIE+S  LRFAC+ L YFSL  QF  AK S WNNKWS+I++FT    G W+ LP   H
Sbjct:   39 LKREDFIFSNIQTASFLAKLPGSINGQQFLIEDCHNCDIFLLDHCTSVQIDGCVNCRVVVGPCES----------------SVFLRDCKRCTVVCVAQQFRACDCEDMDVFLYSATEPVIETSSRLRFACFPLTYFSLQQQFRQAKFSAWNNKWSEIFDFTPDC-GGWTPLPMHPH 197          
BLAST of mRNA_Ecto-sp13_S_contig1024.267.1 vs. uniprot
Match: A0A421GK69_9STRA (Protein XRP2 n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421GK69_9STRA)

HSP 1 Score: 169 bits (428), Expect = 2.230e-47
Identity = 84/172 (48.84%), Postives = 107/172 (62.21%), Query Frame = 0
Query:   44 LNPSDFIFSRKQK-EVIVREPGSIGGQQFIVEECSECEVYLLDHTAALTIDLCTDCRIIVGPCESRQDTPLFLKRFSKKNSSVFIRDCKDCTMVVACQQFRARXXXXXTFFLFSATQPVIESSVGLRFACYTLDYFSLAGQFAAAKLSVWNNKWSQIYNFTGGGEGDWSCLP 214
            L   DFIF   Q    + + PGSI GQQF++E+C  C+++LLDH  ++ ID C +CRI+VGPCES                SVF+RDCK CT+V A QQFR R       +L+SAT+P+IE+S  ++FAC+ L YFSL  QF  AK S WNN WS+IYNFT    G W  LP
Sbjct:   37 LKREDFIFCNIQTASFLAKLPGSINGQQFLIEDCHNCDIFLLDHCTSVQIDACVNCRIVVGPCES----------------SVFLRDCKRCTLVCAVQQFRTRDCEDVDVYLYSATEPIIETSSCMKFACFPLTYFSLQQQFRQAKFSPWNNHWSEIYNFTPD-HGGWKPLP 191          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1024.267.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRD4_ECTSI3.750e-9075.26Retinitis pigmentosa 2 (X-linked recessive) n=1 Ta... [more]
A0A6H5J9Z2_9PHAE1.000e-5468.87C-CAP/cofactor C-like domain-containing protein n=... [more]
G4ZD48_PHYSP1.610e-4949.43Protein XRP2 n=1 Tax=Phytophthora sojae (strain P6... [more]
V9G2C2_PHYPR2.670e-4949.43Protein XRP2 n=8 Tax=Phytophthora parasitica TaxID... [more]
A0A329T3Q5_9STRA2.800e-4943.36Protein XRP2 n=2 Tax=Phytophthora TaxID=4783 RepID... [more]
A0A2D4BH13_PYTIN4.190e-4947.16XRP2-like protein n=1 Tax=Pythium insidiosum TaxID... [more]
A0A8K1FEW1_PYTOL1.970e-4846.02Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A2P4YDP5_9STRA3.270e-4848.86Protein XRP2 n=1 Tax=Phytophthora palmivora var. p... [more]
A0A6A4FTT6_9STRA1.780e-4749.43Protein XRP2 n=2 Tax=Phytophthora TaxID=4783 RepID... [more]
A0A421GK69_9STRA2.230e-4748.84Protein XRP2 n=3 Tax=Phytophthora kernoviae TaxID=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006599CARP motifSMARTSM00673carpcoord: 130..164
e-value: 3.2E-4
score: 30.0
coord: 76..116
e-value: 27.0
score: 13.7
IPR016098Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminalGENE3D2.160.20.70coord: 46..220
e-value: 3.2E-62
score: 211.0
IPR012945Tubulin binding cofactor C-like domainPIRSFPIRSF037947XRP2coord: 1..219
e-value: 3.5E-52
score: 175.3
IPR012945Tubulin binding cofactor C-like domainPFAMPF07986TBCCcoord: 68..202
e-value: 2.4E-35
score: 120.8
IPR039093Protein XRP2PANTHERPTHR15440XRP2 PROTEINcoord: 40..107
coord: 123..215
IPR017901C-CAP/cofactor C-like domainPROSITEPS51329C_CAP_COFACTOR_Ccoord: 26..204
score: 32.952

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1024contigEcto-sp13_S_contig1024:351..3260 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1024.267.1mRNA_Ecto-sp13_S_contig1024.267.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1024 351..3260 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1024.267.1 ID=prot_Ecto-sp13_S_contig1024.267.1|Name=mRNA_Ecto-sp13_S_contig1024.267.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=221bp
MGNLFGKDCPEQKKTKKHGAGVGWNPAAAREGNVTRGTVDKGNLNPSDFI
FSRKQKEVIVREPGSIGGQQFIVEECSECEVYLLDHTAALTIDLCTDCRI
IVGPCESRQDTPLFLKRFSKKNSSVFIRDCKDCTMVVACQQFRARDCTDC
TFFLFSATQPVIESSVGLRFACYTLDYFSLAGQFAAAKLSVWNNKWSQIY
NFTGGGEGDWSCLPEGSHHR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006599CARP_motif
IPR016098CAP/MinC_C
IPR012945Tubulin-bd_cofactor_C_dom
IPR039093XRP2
IPR017901C-CAP_CF_C-like