prot_Ecto-sp13_S_contig1334.2673.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1334.2673.1
Unique Nameprot_Ecto-sp13_S_contig1334.2673.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length1143
Homology
BLAST of mRNA_Ecto-sp13_S_contig1334.2673.1 vs. uniprot
Match: D7FGY9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGY9_ECTSI)

HSP 1 Score: 1644 bits (4257), Expect = 0.000e+0
Identity = 908/1040 (87.31%), Postives = 938/1040 (90.19%), Query Frame = 0
Query:  109 MLKQSRPSPTKGQKLPTLRAVGRSKTRSGEASSNSCSRQRRVSKRGRATDREHTAPDKSNGPSNDSHRFARKIPVEQERKMYSCNGSPMLDCGRGRRAEDGDEFTALSASPRSVNSADSFGTLASTGEESFSLELDGNGNGSLAHEGEADIVGGNGTAEAGSASRGLGIVDRMLFDSWKELPWQARLCPKAIEGQEVVRRTSALEMESLRVQGWRRTQQLLAMSAAREEEQRISGWWKGEAEKLWRMQSQRRQNHETLAARHEAELAAREDKRTELLSEGYGRELAKLDSMDEANHLQSLRQVETLFSFAVGDSISVEETQNTTTPKAGVTTGAAAEGLDTVAAPGAYATPPGTTLRTNARPPGGPDGRGKEEGTPAGTNEQXXXXXXXXXXXEAQVVQETAEAICIEEISSHVQLELERVALHESVMKATADKFRRRRQSLAVILWCGLTAMYRDCRARARRTFVSECAADVGRTKQLASSPSSGGGSTGEGQNFPLPXXXXAG------GTEDVLNEYCGSGSGTLSGCWESDNSIDRPSGVDVAVSPPDVQDALRETTATTGGPGGAGHCERKRATRELRSEASRVVRWDKLQREVLRRSTSEVTRLLTSDGLRRHDGGGWPNAWRQRGDRRGGDDGVAESTLAVHKRARLSMRELRGRQADASLEARSIERSWIASLAKWEAQLVKARAAAADAEVRELRILQLEDAETARALQVSQSLADVVDREQNLVDDAQSALVVDLAKIVADENAKRAEVAAIARRHWWAEARESLLDLFHSVHSSNRNDQERGGGYADVDVGIHGGGSAAEKPATTSSASLQLIRTSLDELLRAEETLIEKAARDFLTAANAGEYGGGGGGPLHVAAAENQQYTNEVLERCTKAVEAASFDPPTSTVGQPTPANLNQWPTEGGSSSGRLGGAQNPEEELASFRGILETDAVQLAVASFETEVREWAVDAAIPVTPSEAVLPPCLAGAPSTIVEIEGKGSPPPFPFIGRPPSSDLTRSQFDLGRVARVKAFARTMEDMLSRARKALLKETL 1142
            MLKQSRPS TKGQ+LPTLRAVG SKT SGEAS+N CS QRRVSKRGRATDREH AP+KSNGPSNDSHRFAR IPVEQERK+Y CNGSPMLDCGRG RAEDGDEFTALSASPRSVNSADSFGTLASTGEESFSLELDGN NGSLA EGEAD VGGNGTAEAGSAS+GLGIVDR LFDSWKELPWQARLCPKAIEGQEVVRR SALEME++RVQ WRRTQQLLA SAAREEEQRISGWWKGEAEKLWR+QSQRRQ+HETLAARHE ELAAREDKRTELLS+GYGRELAKLDSMDEANHL+SLRQ E LFSFAVGDS   EET+  T+PK GVTT   AEGLDTVAAPGAYATPPGTTLRT+ R P  PDGR KEEGT AGT EQXXXXXXX    EA+VVQETAEA CIE+ISSHVQLELERVALHESVMKAT DKFRRRRQSLAVILWCGLTAMYRDCRARARRTFVSECAAD+GR KQLASSPSSGGGSTGEGQNFPL  XXX        GTEDVLNE+CGSGSGTLS C ESD+ I RPSGVDVA SPPDVQDALR+TTATTGGPG AGH ER RATRELRSEASRV RWDKLQR VLRRST EVTRLLT DGLRRHDGGGWPNAWRQRGDRRG D GV ESTLAVHKRARLSMRELRGRQADASLEAR IERSW+ SLA+WEAQLVKARA AADAEVRELRILQ EDAETARAL+VSQSLA V+DREQNLVDDAQS+LVVDLAKIVADENAKRAE AA+ARRHWWAEARESLLDLF SVHSSN NDQE GGG ADVDVGIHGGGSA EKPA TSSASLQ IRTSLDELLRAEE LIEKAA DFLTA NA E GGGGGGPLHVAA ENQ+YTNEVLERCTK  EAASFDPPTSTV QPTP NLNQW TEGGSSSG LGGA NPEEELASFRG LETDAVQLAVASFE EVR+WA+DAAIP T SEAVLPPCLAGAPST+VEIEGKGS PPFP  GRPPSSDLTRSQ DLGRVARVKAFARTMEDMLSR RKALLKETL
Sbjct:    1 MLKQSRPSRTKGQRLPTLRAVGSSKTCSGEASANICSGQRRVSKRGRATDREHIAPEKSNGPSNDSHRFARNIPVEQERKIYGCNGSPMLDCGRGGRAEDGDEFTALSASPRSVNSADSFGTLASTGEESFSLELDGNANGSLAQEGEADAVGGNGTAEAGSASKGLGIVDRTLFDSWKELPWQARLCPKAIEGQEVVRRASALEMENIRVQAWRRTQQLLATSAAREEEQRISGWWKGEAEKLWRIQSQRRQSHETLAARHEGELAAREDKRTELLSKGYGRELAKLDSMDEANHLESLRQAEMLFSFAVGDSSIAEETRKPTSPKEGVTTSTVAEGLDTVAAPGAYATPPGTTLRTSVRSPRVPDGREKEEGTLAGTKEQXXXXXXXNG--EARVVQETAEADCIEKISSHVQLELERVALHESVMKATVDKFRRRRQSLAVILWCGLTAMYRDCRARARRTFVSECAADIGRIKQLASSPSSGGGSTGEGQNFPLSPXXXXXXXXXXXGTEDVLNEFCGSGSGTLSDCGESDSGITRPSGVDVADSPPDVQDALRKTTATTGGPGAAGHRERTRATRELRSEASRVARWDKLQRGVLRRSTYEVTRLLTPDGLRRHDGGGWPNAWRQRGDRRGADGGVVESTLAVHKRARLSMRELRGRQADASLEARIIERSWMVSLAQWEAQLVKARAVAADAEVRELRILQREDAETARALEVSQSLARVIDREQNLVDDAQSSLVVDLAKIVADENAKRAEAAAVARRHWWAEARESLLDLFRSVHSSNWNDQESGGGCADVDVGIHGGGSATEKPAATSSASLQRIRTSLDELLRAEEILIEKAATDFLTAVNADECGGGGGGPLHVAAVENQRYTNEVLERCTKTFEAASFDPPTSTVRQPTPVNLNQWSTEGGSSSGHLGGAHNPEEELASFRGRLETDAVQLAVASFEAEVRQWAIDAAIPETASEAVLPPCLAGAPSTMVEIEGKGSSPPFPLDGRPPSSDLTRSQLDLGRVARVKAFARTMEDMLSRTRKALLKETL 1038          
BLAST of mRNA_Ecto-sp13_S_contig1334.2673.1 vs. uniprot
Match: A0A6H5K2B6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2B6_9PHAE)

HSP 1 Score: 1557 bits (4032), Expect = 0.000e+0
Identity = 892/1076 (82.90%), Postives = 927/1076 (86.15%), Query Frame = 0
Query:  109 MLKQSRPSPTKGQKLPTLRAVGRSKTRSGEASSNSCSRQRRVSKRGRATDREHTAPDKSNGPSNDSHRFARKIPVEQERKMYSCNGSPMLDCGRGRRAEDGDEFTALSASPRSVNSADSFGTLASTGEESFSLELDGNGNGSLAHEGEADIVGGN-GTAEAGSASRGLGIVDRMLFDSWKELPWQARLCPKAIEGQEVVRRTSALEMESLRVQGWRRTQQ-----LLAMSAAREEEQRISGWWKGEAEKLWRMQSQRRQNHETLAARHEAELAAREDKRTELLSEGYGRELAKLDSMDEANHLQSLRQVETLFSFAVGDSISVEETQNTTTPKAGVTTGAAAEGLDTVAAPGAYATPPGTTLRTNARPPGGPDGRGKEEGTPAGTNEQXXXXXXXXXXXE-AQVVQETAEAICIEEISSHVQLELERVALHESVMKATADKFRRRRQSLAVILWCGLTAMYRDCRARARRTFVSECAADVGRTKQLASSPSSGGGSTGEGQNFPLPXXXXAG------GTEDVLNEYCGSGSGTLSGCWESDNSIDRPSGVDVAVSPPDVQDALRETTATTGGPGGAGHCERKRATRELRSEASRVVRWDKLQREVLRRSTSEVTRLLTSDGLRRHDGGGWPNAWRQRGDRRGGDDGVAESTLAVHKRARLSMRELRGRQADASLEARSIERSWIASLAKWEAQLVKARAAAADAEVRELRILQLEDAE------------------------------TARALQVSQSLADVVDREQNLVDDAQSALVVDLAKIVADENAKRAEVAAIARRHWWAEARESLLDLFHSVHSSNRNDQERGGGYADVDVGIHGGGSAAEKPATTSSASLQLIRTSLDELLRAEETLIEKAARDFLTAANAGEYGGGGGGPLHVAAAENQQYTNEVLERCTKAVEAASFDPPTSTVGQPTPANLNQWPTEGGSSSGRLGGAQNPEEELASFRGILETDAVQLAVASFETEVREWAVDAAIPVTPSEAVLPPCLAGAPSTIVEIEGKGSPPPFPFIGRPPSSDLTRSQFDLGRVARVKAFARTMEDMLSRARKALLKET 1141
            MLKQSRPSPTKGQKLPTLRAVG SKTRSGEASSNSCSRQRRVSKRGRATDRE TA DKSNGPSNDSH+FAR IPVEQER++Y CNGS MLDCGRGRRAEDGDEFTALSASPRSVNSADSFGTLASTGEESFSLEL+ N NGSLA EGEAD VGGN GTAEAGSASRGLGIV R LFDSWKE  WQ RLCP AIEGQEVVRRTSAL+ME     G   T +       A SAAREEEQRISGWWKGEAE LWR+QSQRRQ+HETLAARHE ELAA EDKRTELLS+G GRELAKLDSMDEANHL+SLRQVETLFSFAVG   +VEET+ TTTPKAGVTTG AAEGL TVAAPGA+ATP GTTLRT+ARPPG PDGR KEEGTPAGT EQXXXXXXXXXXX  A+VVQETAEA C E  SSH+QLELERVALHESVMKATADKFRRRRQSLAVILWCGLTAMYRDCRARARRTFVSECAAD+GR KQLASSPSSGGGSTGEGQN PL  XXX        GTEDVLNEYC   S  L  C ESDNSI+RPSGVDV  S PDVQDALR+TTAT   PG AG  ER RATRELRSEASRV RWDKLQREVLRRST EVTRLLTSDGLRRHDGGGWP +WRQRGDRRGGDDGVA+STLAVHKRARLSMRELRGRQAD SLEARSIERSWI SLAKWEAQLVKARAAAADAEVR LRILQ EDAE                              TARAL+VSQSLADV+DREQ+LVDDAQSALVVDLAKIVADENAKRAE AA+ARRHWWAEARE LLDLFHSVHSSNRNDQERGGG ADVDVGIHG GSA EKPA TSSASLQLIRTSLDELLRAEE L+EKAA+DFLTA NA EYGGGGGGPLHVAAAENQ+ TNEVL+RCTKA EAASFDP TSTVGQPTP NLNQW TEGGSSSGRLGGA NPEEELASFRG LETDAVQLAVASF+ EVRE A+DAAIPV  SEAV+PPC  GAPST++EIEGKGSPPPFP  GRPPSSDLTRS  DL RVARVKAFARTMEDMLS ARKA+LKET
Sbjct:    1 MLKQSRPSPTKGQKLPTLRAVGSSKTRSGEASSNSCSRQRRVSKRGRATDREQTATDKSNGPSNDSHQFARNIPVEQERRIYGCNGSAMLDCGRGRRAEDGDEFTALSASPRSVNSADSFGTLASTGEESFSLELNDNANGSLAQEGEADAVGGNNGTAEAGSASRGLGIVGRTLFDSWKEFLWQVRLCPMAIEGQEVVRRTSALKMEM--TGGSFSTSKGCSGLFCATSAAREEEQRISGWWKGEAEILWRIQSQRRQSHETLAARHEEELAAHEDKRTELLSKGCGRELAKLDSMDEANHLESLRQVETLFSFAVGGRGTVEETRETTTPKAGVTTGTAAEGLFTVAAPGAHATPLGTTLRTSARPPGVPDGREKEEGTPAGTKEQXXXXXXXXXXXXXARVVQETAEADCTENFSSHLQLELERVALHESVMKATADKFRRRRQSLAVILWCGLTAMYRDCRARARRTFVSECAADIGRIKQLASSPSSGGGSTGEGQNCPLSPXXXXXXXXXXXGTEDVLNEYCCISSDILCSCGESDNSINRPSGVDVTDSSPDVQDALRKTTATIERPGVAGQRERTRATRELRSEASRVARWDKLQREVLRRSTYEVTRLLTSDGLRRHDGGGWPYSWRQRGDRRGGDDGVAKSTLAVHKRARLSMRELRGRQADVSLEARSIERSWIVSLAKWEAQLVKARAAAADAEVRGLRILQREDAEVGGRGRGRVGRAFSTSPNMVPPSLQQQNQQTARALEVSQSLADVIDREQDLVDDAQSALVVDLAKIVADENAKRAEAAAVARRHWWAEAREILLDLFHSVHSSNRNDQERGGGCADVDVGIHGSGSATEKPAATSSASLQLIRTSLDELLRAEEILVEKAAKDFLTAVNADEYGGGGGGPLHVAAAENQRSTNEVLDRCTKAFEAASFDPSTSTVGQPTPVNLNQWSTEGGSSSGRLGGAHNPEEELASFRGRLETDAVQLAVASFDMEVRELAIDAAIPVAASEAVMPPCFPGAPSTMLEIEGKGSPPPFPLDGRPPSSDLTRSHLDLRRVARVKAFARTMEDMLSTARKAILKET 1074          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1334.2673.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FGY9_ECTSI0.000e+087.31Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K2B6_9PHAE0.000e+082.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 783..803
NoneNo IPR availableCOILSCoilCoilcoord: 360..387
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..1143

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1334contigEcto-sp13_S_contig1334:9689..17507 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1334.2673.1mRNA_Ecto-sp13_S_contig1334.2673.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1334 9308..17507 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1334.2673.1 ID=prot_Ecto-sp13_S_contig1334.2673.1|Name=mRNA_Ecto-sp13_S_contig1334.2673.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1143bp
MVRMLTSGIVFGGPMDSTLAICRCVVHKQDSSGHQRDNCMGPSLNINPSS
ISSSNHATSPKSLHSLSLSALGRRSEGARGKSERGRGRGRGVGGPVQSRR
LPLLSPPRMLKQSRPSPTKGQKLPTLRAVGRSKTRSGEASSNSCSRQRRV
SKRGRATDREHTAPDKSNGPSNDSHRFARKIPVEQERKMYSCNGSPMLDC
GRGRRAEDGDEFTALSASPRSVNSADSFGTLASTGEESFSLELDGNGNGS
LAHEGEADIVGGNGTAEAGSASRGLGIVDRMLFDSWKELPWQARLCPKAI
EGQEVVRRTSALEMESLRVQGWRRTQQLLAMSAAREEEQRISGWWKGEAE
KLWRMQSQRRQNHETLAARHEAELAAREDKRTELLSEGYGRELAKLDSMD
EANHLQSLRQVETLFSFAVGDSISVEETQNTTTPKAGVTTGAAAEGLDTV
AAPGAYATPPGTTLRTNARPPGGPDGRGKEEGTPAGTNEQQQQQQQLEED
EEAQVVQETAEAICIEEISSHVQLELERVALHESVMKATADKFRRRRQSL
AVILWCGLTAMYRDCRARARRTFVSECAADVGRTKQLASSPSSGGGSTGE
GQNFPLPPPPPAGGTEDVLNEYCGSGSGTLSGCWESDNSIDRPSGVDVAV
SPPDVQDALRETTATTGGPGGAGHCERKRATRELRSEASRVVRWDKLQRE
VLRRSTSEVTRLLTSDGLRRHDGGGWPNAWRQRGDRRGGDDGVAESTLAV
HKRARLSMRELRGRQADASLEARSIERSWIASLAKWEAQLVKARAAAADA
EVRELRILQLEDAETARALQVSQSLADVVDREQNLVDDAQSALVVDLAKI
VADENAKRAEVAAIARRHWWAEARESLLDLFHSVHSSNRNDQERGGGYAD
VDVGIHGGGSAAEKPATTSSASLQLIRTSLDELLRAEETLIEKAARDFLT
AANAGEYGGGGGGPLHVAAAENQQYTNEVLERCTKAVEAASFDPPTSTVG
QPTPANLNQWPTEGGSSSGRLGGAQNPEEELASFRGILETDAVQLAVASF
ETEVREWAVDAAIPVTPSEAVLPPCLAGAPSTIVEIEGKGSPPPFPFIGR
PPSSDLTRSQFDLGRVARVKAFARTMEDMLSRARKALLKETLK
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