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Homology
BLAST of mRNA_Ecto-sp13_S_contig1334.2673.1 vs. uniprot
Match: D7FGY9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGY9_ECTSI) HSP 1 Score: 1644 bits (4257), Expect = 0.000e+0 Identity = 908/1040 (87.31%), Postives = 938/1040 (90.19%), Query Frame = 1
Query: 706 MLKQSRPSPTKGQKLPTLRAVGRSKTRSGEASSNSCSRQRRVSKRGRATDREHTAPDKSNGPSNDSHRFARKIPVEQERKMYSCNGSPMLDCGRGRRAEDGDEFTALSASPRSVNSADSFGTLASTGEESFSLELDGNGNGSLAHEGEADIVGGNGTAEAGSASRGLGIVDRMLFDSWKELPWQARLCPKAIEGQEVVRRTSALEMESLRVQGWRRTQQLLAMSAAREEEQRISGWWKGEAEKLWRMQSQRRQNHETLAARHEAELAAREDKRTELLSEGYGRELAKLDSMDEANHLQSLRQVETLFSFAVGDSISVEETQNTTTPKAGVTTGAAAEGLDTVAAPGAYATPPGTTLRTNARPPGGPDGRGKEEGTPAGTNEQXXXXXXXXXXXEAQVVQETAEAICIEEISSHVQLELERVALHESVMKATADKFRRRRQSLAVILWCGLTAMYRDCRARARRTFVSECAADVGRTKQLASSPSSGGGSTGEGQNFPLPXXXXAG------GTEDVLNEYCGSGSGTLSGCWESDNSIDRPSGVDVAVSPPDVQDALRETTATTGGPGGAGHCERKRATRELRSEASRVVRWDKLQREVLRRSTSEVTRLLTSDGLRRHDGGGWPNAWRQRGDRRGGDDGVAESTLAVHKRARLSMRELRGRQADASLEARSIERSWIASLAKWEAQLVKARAAAADAEVRELRILQLEDAETARALQVSQSLADVVDREQNLVDDAQSALVVDLAKIVADENAKRAEVAAIARRHWWAEARESLLDLFHSVHSSNRNDQERGGGYADVDVGIHGGGSAAEKPATTSSASLQLIRTSLDELLRAEETLIEKAARDFLTAANAGEYGGGGGGPLHVAAAENQQYTNEVLERCTKAVEAASFDPPTSTVGQPTPANLNQWPTEGGSSSGRLGGAQNPEEELASFRGILETDAVQLAVASFETEVREWAVDAAIPVTPSEAVLPPCLAGAPSTIVEIEGKGSPPPFPFIGRPPSSDLTRSQFDLGRVARVKAFARTMEDMLSRARKALLKETL 3807
MLKQSRPS TKGQ+LPTLRAVG SKT SGEAS+N CS QRRVSKRGRATDREH AP+KSNGPSNDSHRFAR IPVEQERK+Y CNGSPMLDCGRG RAEDGDEFTALSASPRSVNSADSFGTLASTGEESFSLELDGN NGSLA EGEAD VGGNGTAEAGSAS+GLGIVDR LFDSWKELPWQARLCPKAIEGQEVVRR SALEME++RVQ WRRTQQLLA SAAREEEQRISGWWKGEAEKLWR+QSQRRQ+HETLAARHE ELAAREDKRTELLS+GYGRELAKLDSMDEANHL+SLRQ E LFSFAVGDS EET+ T+PK GVTT AEGLDTVAAPGAYATPPGTTLRT+ R P PDGR KEEGT AGT EQXXXXXXX EA+VVQETAEA CIE+ISSHVQLELERVALHESVMKAT DKFRRRRQSLAVILWCGLTAMYRDCRARARRTFVSECAAD+GR KQLASSPSSGGGSTGEGQNFPL XXX GTEDVLNE+CGSGSGTLS C ESD+ I RPSGVDVA SPPDVQDALR+TTATTGGPG AGH ER RATRELRSEASRV RWDKLQR VLRRST EVTRLLT DGLRRHDGGGWPNAWRQRGDRRG D GV ESTLAVHKRARLSMRELRGRQADASLEAR IERSW+ SLA+WEAQLVKARA AADAEVRELRILQ EDAETARAL+VSQSLA V+DREQNLVDDAQS+LVVDLAKIVADENAKRAE AA+ARRHWWAEARESLLDLF SVHSSN NDQE GGG ADVDVGIHGGGSA EKPA TSSASLQ IRTSLDELLRAEE LIEKAA DFLTA NA E GGGGGGPLHVAA ENQ+YTNEVLERCTK EAASFDPPTSTV QPTP NLNQW TEGGSSSG LGGA NPEEELASFRG LETDAVQLAVASFE EVR+WA+DAAIP T SEAVLPPCLAGAPST+VEIEGKGS PPFP GRPPSSDLTRSQ DLGRVARVKAFARTMEDMLSR RKALLKETL
Sbjct: 1 MLKQSRPSRTKGQRLPTLRAVGSSKTCSGEASANICSGQRRVSKRGRATDREHIAPEKSNGPSNDSHRFARNIPVEQERKIYGCNGSPMLDCGRGGRAEDGDEFTALSASPRSVNSADSFGTLASTGEESFSLELDGNANGSLAQEGEADAVGGNGTAEAGSASKGLGIVDRTLFDSWKELPWQARLCPKAIEGQEVVRRASALEMENIRVQAWRRTQQLLATSAAREEEQRISGWWKGEAEKLWRIQSQRRQSHETLAARHEGELAAREDKRTELLSKGYGRELAKLDSMDEANHLESLRQAEMLFSFAVGDSSIAEETRKPTSPKEGVTTSTVAEGLDTVAAPGAYATPPGTTLRTSVRSPRVPDGREKEEGTLAGTKEQXXXXXXXNG--EARVVQETAEADCIEKISSHVQLELERVALHESVMKATVDKFRRRRQSLAVILWCGLTAMYRDCRARARRTFVSECAADIGRIKQLASSPSSGGGSTGEGQNFPLSPXXXXXXXXXXXGTEDVLNEFCGSGSGTLSDCGESDSGITRPSGVDVADSPPDVQDALRKTTATTGGPGAAGHRERTRATRELRSEASRVARWDKLQRGVLRRSTYEVTRLLTPDGLRRHDGGGWPNAWRQRGDRRGADGGVVESTLAVHKRARLSMRELRGRQADASLEARIIERSWMVSLAQWEAQLVKARAVAADAEVRELRILQREDAETARALEVSQSLARVIDREQNLVDDAQSSLVVDLAKIVADENAKRAEAAAVARRHWWAEARESLLDLFRSVHSSNWNDQESGGGCADVDVGIHGGGSATEKPAATSSASLQRIRTSLDELLRAEEILIEKAATDFLTAVNADECGGGGGGPLHVAAVENQRYTNEVLERCTKTFEAASFDPPTSTVRQPTPVNLNQWSTEGGSSSGHLGGAHNPEEELASFRGRLETDAVQLAVASFEAEVRQWAIDAAIPETASEAVLPPCLAGAPSTMVEIEGKGSSPPFPLDGRPPSSDLTRSQLDLGRVARVKAFARTMEDMLSRTRKALLKETL 1038
BLAST of mRNA_Ecto-sp13_S_contig1334.2673.1 vs. uniprot
Match: A0A6H5K2B6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2B6_9PHAE) HSP 1 Score: 1557 bits (4032), Expect = 0.000e+0 Identity = 892/1076 (82.90%), Postives = 927/1076 (86.15%), Query Frame = 1
Query: 706 MLKQSRPSPTKGQKLPTLRAVGRSKTRSGEASSNSCSRQRRVSKRGRATDREHTAPDKSNGPSNDSHRFARKIPVEQERKMYSCNGSPMLDCGRGRRAEDGDEFTALSASPRSVNSADSFGTLASTGEESFSLELDGNGNGSLAHEGEADIVGGN-GTAEAGSASRGLGIVDRMLFDSWKELPWQARLCPKAIEGQEVVRRTSALEMESLRVQGWRRTQQ-----LLAMSAAREEEQRISGWWKGEAEKLWRMQSQRRQNHETLAARHEAELAAREDKRTELLSEGYGRELAKLDSMDEANHLQSLRQVETLFSFAVGDSISVEETQNTTTPKAGVTTGAAAEGLDTVAAPGAYATPPGTTLRTNARPPGGPDGRGKEEGTPAGTNEQXXXXXXXXXXXE-AQVVQETAEAICIEEISSHVQLELERVALHESVMKATADKFRRRRQSLAVILWCGLTAMYRDCRARARRTFVSECAADVGRTKQLASSPSSGGGSTGEGQNFPLPXXXXAG------GTEDVLNEYCGSGSGTLSGCWESDNSIDRPSGVDVAVSPPDVQDALRETTATTGGPGGAGHCERKRATRELRSEASRVVRWDKLQREVLRRSTSEVTRLLTSDGLRRHDGGGWPNAWRQRGDRRGGDDGVAESTLAVHKRARLSMRELRGRQADASLEARSIERSWIASLAKWEAQLVKARAAAADAEVRELRILQLEDAE------------------------------TARALQVSQSLADVVDREQNLVDDAQSALVVDLAKIVADENAKRAEVAAIARRHWWAEARESLLDLFHSVHSSNRNDQERGGGYADVDVGIHGGGSAAEKPATTSSASLQLIRTSLDELLRAEETLIEKAARDFLTAANAGEYGGGGGGPLHVAAAENQQYTNEVLERCTKAVEAASFDPPTSTVGQPTPANLNQWPTEGGSSSGRLGGAQNPEEELASFRGILETDAVQLAVASFETEVREWAVDAAIPVTPSEAVLPPCLAGAPSTIVEIEGKGSPPPFPFIGRPPSSDLTRSQFDLGRVARVKAFARTMEDMLSRARKALLKET 3804
MLKQSRPSPTKGQKLPTLRAVG SKTRSGEASSNSCSRQRRVSKRGRATDRE TA DKSNGPSNDSH+FAR IPVEQER++Y CNGS MLDCGRGRRAEDGDEFTALSASPRSVNSADSFGTLASTGEESFSLEL+ N NGSLA EGEAD VGGN GTAEAGSASRGLGIV R LFDSWKE WQ RLCP AIEGQEVVRRTSAL+ME G T + A SAAREEEQRISGWWKGEAE LWR+QSQRRQ+HETLAARHE ELAA EDKRTELLS+G GRELAKLDSMDEANHL+SLRQVETLFSFAVG +VEET+ TTTPKAGVTTG AAEGL TVAAPGA+ATP GTTLRT+ARPPG PDGR KEEGTPAGT EQXXXXXXXXXXX A+VVQETAEA C E SSH+QLELERVALHESVMKATADKFRRRRQSLAVILWCGLTAMYRDCRARARRTFVSECAAD+GR KQLASSPSSGGGSTGEGQN PL XXX GTEDVLNEYC S L C ESDNSI+RPSGVDV S PDVQDALR+TTAT PG AG ER RATRELRSEASRV RWDKLQREVLRRST EVTRLLTSDGLRRHDGGGWP +WRQRGDRRGGDDGVA+STLAVHKRARLSMRELRGRQAD SLEARSIERSWI SLAKWEAQLVKARAAAADAEVR LRILQ EDAE TARAL+VSQSLADV+DREQ+LVDDAQSALVVDLAKIVADENAKRAE AA+ARRHWWAEARE LLDLFHSVHSSNRNDQERGGG ADVDVGIHG GSA EKPA TSSASLQLIRTSLDELLRAEE L+EKAA+DFLTA NA EYGGGGGGPLHVAAAENQ+ TNEVL+RCTKA EAASFDP TSTVGQPTP NLNQW TEGGSSSGRLGGA NPEEELASFRG LETDAVQLAVASF+ EVRE A+DAAIPV SEAV+PPC GAPST++EIEGKGSPPPFP GRPPSSDLTRS DL RVARVKAFARTMEDMLS ARKA+LKET
Sbjct: 1 MLKQSRPSPTKGQKLPTLRAVGSSKTRSGEASSNSCSRQRRVSKRGRATDREQTATDKSNGPSNDSHQFARNIPVEQERRIYGCNGSAMLDCGRGRRAEDGDEFTALSASPRSVNSADSFGTLASTGEESFSLELNDNANGSLAQEGEADAVGGNNGTAEAGSASRGLGIVGRTLFDSWKEFLWQVRLCPMAIEGQEVVRRTSALKMEM--TGGSFSTSKGCSGLFCATSAAREEEQRISGWWKGEAEILWRIQSQRRQSHETLAARHEEELAAHEDKRTELLSKGCGRELAKLDSMDEANHLESLRQVETLFSFAVGGRGTVEETRETTTPKAGVTTGTAAEGLFTVAAPGAHATPLGTTLRTSARPPGVPDGREKEEGTPAGTKEQXXXXXXXXXXXXXARVVQETAEADCTENFSSHLQLELERVALHESVMKATADKFRRRRQSLAVILWCGLTAMYRDCRARARRTFVSECAADIGRIKQLASSPSSGGGSTGEGQNCPLSPXXXXXXXXXXXGTEDVLNEYCCISSDILCSCGESDNSINRPSGVDVTDSSPDVQDALRKTTATIERPGVAGQRERTRATRELRSEASRVARWDKLQREVLRRSTYEVTRLLTSDGLRRHDGGGWPYSWRQRGDRRGGDDGVAKSTLAVHKRARLSMRELRGRQADVSLEARSIERSWIVSLAKWEAQLVKARAAAADAEVRGLRILQREDAEVGGRGRGRVGRAFSTSPNMVPPSLQQQNQQTARALEVSQSLADVIDREQDLVDDAQSALVVDLAKIVADENAKRAEAAAVARRHWWAEAREILLDLFHSVHSSNRNDQERGGGCADVDVGIHGSGSATEKPAATSSASLQLIRTSLDELLRAEEILVEKAAKDFLTAVNADEYGGGGGGPLHVAAAENQRSTNEVLDRCTKAFEAASFDPSTSTVGQPTPVNLNQWSTEGGSSSGRLGGAHNPEEELASFRGRLETDAVQLAVASFDMEVRELAIDAAIPVAASEAVMPPCFPGAPSTMLEIEGKGSPPPFPLDGRPPSSDLTRSHLDLRRVARVKAFARTMEDMLSTARKAILKET 1074
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Stop | 0 |
| Start | 1 |
| Model size | 3810 |
| Hectar predicted targeting category | other localisation |
| Exons | 7 |
| Cds size | 3429 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1681462712.7795043-UTR-Ecto-sp13_S_contig1334:9307..9688 | 1681462712.7795043-UTR-Ecto-sp13_S_contig1334:9307..9688 | Ectocarpus species13 EcNAP12_S_4_19m | UTR | Ecto-sp13_S_contig1334 9308..9688 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1681462712.7904074-CDS-Ecto-sp13_S_contig1334:9688..9862 | 1681462712.7904074-CDS-Ecto-sp13_S_contig1334:9688..9862 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig1334 9689..9862 + |
| 1681462712.8005707-CDS-Ecto-sp13_S_contig1334:11017..11321 | 1681462712.8005707-CDS-Ecto-sp13_S_contig1334:11017..11321 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig1334 11018..11321 + |
| 1681462712.8115034-CDS-Ecto-sp13_S_contig1334:11499..11966 | 1681462712.8115034-CDS-Ecto-sp13_S_contig1334:11499..11966 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig1334 11500..11966 + |
| 1681462712.8218699-CDS-Ecto-sp13_S_contig1334:12274..12478 | 1681462712.8218699-CDS-Ecto-sp13_S_contig1334:12274..12478 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig1334 12275..12478 + |
| 1681462712.8325977-CDS-Ecto-sp13_S_contig1334:13042..14137 | 1681462712.8325977-CDS-Ecto-sp13_S_contig1334:13042..14137 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig1334 13043..14137 + |
| 1681462712.8416486-CDS-Ecto-sp13_S_contig1334:14519..14717 | 1681462712.8416486-CDS-Ecto-sp13_S_contig1334:14519..14717 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig1334 14520..14717 + |
| 1681462712.8581543-CDS-Ecto-sp13_S_contig1334:16520..17507 | 1681462712.8581543-CDS-Ecto-sp13_S_contig1334:16520..17507 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig1334 16521..17507 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1334.2673.1 >prot_Ecto-sp13_S_contig1334.2673.1 ID=prot_Ecto-sp13_S_contig1334.2673.1|Name=mRNA_Ecto-sp13_S_contig1334.2673.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1143bp
MVRMLTSGIVFGGPMDSTLAICRCVVHKQDSSGHQRDNCMGPSLNINPSS ISSSNHATSPKSLHSLSLSALGRRSEGARGKSERGRGRGRGVGGPVQSRR LPLLSPPRMLKQSRPSPTKGQKLPTLRAVGRSKTRSGEASSNSCSRQRRV SKRGRATDREHTAPDKSNGPSNDSHRFARKIPVEQERKMYSCNGSPMLDC GRGRRAEDGDEFTALSASPRSVNSADSFGTLASTGEESFSLELDGNGNGS LAHEGEADIVGGNGTAEAGSASRGLGIVDRMLFDSWKELPWQARLCPKAI EGQEVVRRTSALEMESLRVQGWRRTQQLLAMSAAREEEQRISGWWKGEAE KLWRMQSQRRQNHETLAARHEAELAAREDKRTELLSEGYGRELAKLDSMD EANHLQSLRQVETLFSFAVGDSISVEETQNTTTPKAGVTTGAAAEGLDTV AAPGAYATPPGTTLRTNARPPGGPDGRGKEEGTPAGTNEQQQQQQQLEED EEAQVVQETAEAICIEEISSHVQLELERVALHESVMKATADKFRRRRQSL AVILWCGLTAMYRDCRARARRTFVSECAADVGRTKQLASSPSSGGGSTGE GQNFPLPPPPPAGGTEDVLNEYCGSGSGTLSGCWESDNSIDRPSGVDVAV SPPDVQDALRETTATTGGPGGAGHCERKRATRELRSEASRVVRWDKLQRE VLRRSTSEVTRLLTSDGLRRHDGGGWPNAWRQRGDRRGGDDGVAESTLAV HKRARLSMRELRGRQADASLEARSIERSWIASLAKWEAQLVKARAAAADA EVRELRILQLEDAETARALQVSQSLADVVDREQNLVDDAQSALVVDLAKI VADENAKRAEVAAIARRHWWAEARESLLDLFHSVHSSNRNDQERGGGYAD VDVGIHGGGSAAEKPATTSSASLQLIRTSLDELLRAEETLIEKAARDFLT AANAGEYGGGGGGPLHVAAAENQQYTNEVLERCTKAVEAASFDPPTSTVG QPTPANLNQWPTEGGSSSGRLGGAQNPEEELASFRGILETDAVQLAVASF ETEVREWAVDAAIPVTPSEAVLPPCLAGAPSTIVEIEGKGSPPPFPFIGR PPSSDLTRSQFDLGRVARVKAFARTMEDMLSRARKALLKETLK back to topmRNA from alignment at Ecto-sp13_S_contig1334:9308..17507+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_Ecto-sp13_S_contig1334.2673.1 ID=mRNA_Ecto-sp13_S_contig1334.2673.1|Name=mRNA_Ecto-sp13_S_contig1334.2673.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=8200bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1334:9308..17507+ (Ectocarpus species13 EcNAP12_S_4_19m) CTTGGTCGAATCCGTGTCCAATCGGGGGGATCGGGCGGAGGGGGTATGCC
AGTCCAAAAATAAAACGTCGGGCCATTTCTCGGGAGCAAAGGCTGTAAAT
AATGACAAATTTCGAAAGCATCGAGGAAAAGAGTCAGCCTAAATACCGTC
TGTTGTTTGGTGACGGTTTCAGATGAAAGTTGCCGGTGTACTTGACGTTT
TTCGGTCGCGCTCGTGTAACGAATACCGACCCGAAACGACCGTAATGCTT
TGGCAAGTTGAGGTCTTTTCGCCAATAGACCGTTGAAATCACAATCCTAC
GAGACCTTTTTTAGTCCACGATGCTCCGCATGGCGTCTGAGGTATTTCGA
TTGCACCACGCACGGCAAGCAATCATGTTTCATGGTGCGCATGTTGACTA
GTGGCATCGTATTCGGTGGGCCGATGGACTCCACGTTGGCAATTTGTCGA
TGTGTGGTGCACAAGCAGGACAGCTCCGGCCACCAGCGGGATAATTGCAT
GGGCCCGAGTTTGAACATCAACCCATCTAGCATCAGCAGTAGCAATCACG
CCACGGTGAGAGCGGGATATTGCATGACGCGCGTGTACGTCCGTACTCCC
TGTAGAAAAGGTTGTGCTACATGTATACATAGACTACTGTACACGGCGAG
TGAGTAAGTGCGCATTGTAGGTTTCCCATGAGTAGGTTTCCTACGAACTT
GGTACGCCTCCTGCCATCGCATACCCTCTGTGCTACGGTGTTGGTCAGCC
CTGTTGTATACACTGGCTAGATGTGCTGTGCACAGGGTCTCACCGAGTAT
ACTCTACAATAGGTTGTACAGAGTAGACTATAGGCTCGAATCAAATGCGT
CGCCATCTCCGAGGCCACATGGACCTCACGAGCTGAGCAAGATGGTGGTT
TCTCTCCTTGCCGGGCACACGGGAACGCTCGAAGATTTGAACTGCTGTAC
ATCCGTGCATTGCCTTAGACATGCTGAAATAACGCCCAGCCTCCAGCAAG
TGTCCTTGAACAACGGTCGCCCCGGTGGTCCTCGAATACCTGCTACAAAG
TAGAAGCAGGTTGTAGGTGGGATTGTTTCTCACTGTTGAGGATTTCTTAG
ACTGCATGTCAACGAGGGAAGGGACGGCGAACCCTTCAAGCGATGCAAAC
TAAGGCCAGTGCCGCAGGAGGAAAGGGAGGGCCAAAAAAATCAGATGACA
CACAAGCACACTAGTTGGGTCGTCTAGCTAGAAGAAGTGGAGGACAGGGG
CCAGAGGAGCAGACGGTAGACTCTAATAATGGGACAAGAAAAAAAAAAAG
CATCGCCTGTTGACTACACTACACCGTCTGATTTTTCAGAGATTGATACT
CGAAGATGTGAAGACGCGCGCCAGAACGAAAGGAACAAACACAAACATAC
CCCGTGTTTTAAACCGCGCTGAGACTGGCGTCTTTCATCGGTCAGCCGGT
TAGCGCGGTCGATGCTAACAATTAAGACACACACCTCAAGCGGTGAGTGT
TTTACTTTCTGCCGATTTTTCCAAAGAAACTCCGAAACTTCTGCTGCCGT
ACTTTCTGTGCCTCTAGCAAAGTGGAATGCCATACAGTTTGTGGTCAAAG
GATAGGGACACCTTTATTCCTTTTCGTGTCATTTTGTTTGGCACACCCAA
TGTCTGATGGAACACCAAACGCACCCCATGTTGTCTTCGGGTGTGGCAAA
CTCGACCCAGAGCCCGAAGAGCCTGCACAGCCTATCGCTATCAGCCTTAG
GAAGAAGAAGCGAGGGGGCACGGGGAAAAAGCGAAAGAGGAAGAGGACGA
GGACGAGGAGTAGGAGGGCCGGTACAGTCAAGACGCTTGCCACTGCTATC
GCCGCCACGCATGCTGAAGCAGAGCCGCCCCTCGCCTACGAAGGGACAGA
AGCTCCCCACTCTCCGTGCGGTAGGAAGAAGCAAAACCAGGAGCGGGGAA
GCTAGCTCCAACAGCTGCAGCAGGCAGCGACGCGTGTCGAAACGAGGAAG
GGCTACTGATCGAGGTGACAGCCTGTGGATATTGTTTTGTATTCTTAATC
CGACACCGAGAAAACCACTCTAGGAAGGGAACACAGAAGCTACAGAGACA
GAACAAAAAGTGCCCGCTTCCCGACTCATCGAACAACATATTCATATTGA
GACCACCGCTTCACGTCCATAACATCGTGGTCAAATTTACAGAACACACC
GCACCGGACAAAAGCAATGGACCCAGCAATGACTCTCACCGATTCGCAAG
GAAGATCCCAGTTGAGCAGGAGAGGAAAATGTACAGCTGCAATGGGTCAC
CAATGCTAGATTGCGGTCGCGGCCGCAGAGCCGAAGACGGTGATGAGTTC
ACCGCGTTGTCAGCCTCACCGCGCTCCGTCAACTCCGCCGACTCGTTCGG
AACGCTCGCGTCAACCGGCGAGGAGTCGTTCTCTCTGGAATTGGACGGCA
ACGGCAACGGGAGCTTGGCACATGAAGGCGAGGCCGATATTGTTGGTGGT
AATGGTACCGCGGAGGCTGGAAGCGCCAGCAGAGGGCTGGGAATCGTCGA
CAGGATGCTGTTCGATAGCTGGAAGGAATTGCCGTGGCAGGCACGCTTGT
GCCCGAAGGCTATCGAAGGGCAGGAGGTGGTTCGCAGGACCTCCGCTCTA
GAGATGGAGGTGATAGGCGGCTCGTTTTCGACCTCATAAGGGTGCTCGGG
TCTTTTCCGTGGTACCCTGTTGTTAACTCTGCCAACCACAGCAGGTTTCT
CTACACTTCACGTTAAAGATGGCGAGTGGATACTGACATAGGGCTGTGTG
AGAAATACAGGATGCTCATTGCTTTGCTGCTCGTGGGACGGCAACCGAGT
AGTCAAAGGCGTGTCGCAGAGAGCCTCCGGTAGAGAGCTCTACTTTACGA
GAAGCCGTGCACGATACTATTTCGAGCGATTTTATGCCGTCTTCTCCTGC
GCGATGGAACCGTTCAGAGCCTTCGGGTGCAAGGTTGGAGACGGACGCAA
CAGCTTTTAGCTATGAGCGCGGCACGAGAGGAGGAACAGAGGATCTCGGG
GTGGTGGAAAGGAGAAGCCGAGAAACTGTGGAGGATGCAATCGCAGCGTC
GCCAGAATCACGAGACGCTTGCGGCTCGCCACGAGGCGGAGCTTGCGGCT
CGCGAGGACAAGCGAACTGAGGTGCGAACATCCGTGAAAAGGGAAAACAT
CAGCGATACCATAATCGTCGTCAAACCGAGTACTCTAATTTGCACTGTCA
TGGGTAGGCAGCAATAATGCAGCGGCGAGCTTGGCATTTTGTCAGAGCCC
AGCATCATCGGCTCACGGCCGTGCAGCTGGGTGCTGGATATGTACGTGCA
AGCATCTTAGGTATGAGGTCACCAATGGTATTTTTGTCGATCTCGCCGGA
TCGTGGTGATGTAGTCGGCCACGGGTACACCTGTGTGTAAAATCGTTAGA
GGCTCGGGGCGAGCGTTGTCGCGGTGGTACTTCTGCAGATAATATTCGAT
TCGCTGCTGCACTATAGGAGACGTAGCGGGGTCTACTGAGTTTTGCTTAC
GTCACCCTCGCCTGTCTTAGTTCTGACGCATCGCTCCTCACCCATCGTTG
TAACATCGGAGTACCGGCGTGAGCCCGCTTACAAACTGAAGAAGCAGCTG
CAAACACTTCGTAGAAAAACATCTTGCGGGTGACATTCAATCTGGTTCCG
GCACGCACATCGACCTGCCTGCTGCAATTCTTCAGCTACTAAGCGAGGGA
TACGGCCGAGAGCTAGCGAAGCTCGATAGCATGGACGAGGCGAACCACCT
GCAAAGCCTGCGGCAAGTGGAAACGCTGTTTTCGTTCGCCGTTGGCGACA
GCATTAGCGTAGAGGAAACGCAAAACACCACAACTCCGAAAGCGGGAGTG
ACAACCGGTGCCGCCGCGGAAGGGCTTGACACGGTGGCGGCCCCTGGCGC
CTACGCCACGCCTCCCGGCACCACCCTACGAACAAACGCGCGGCCGCCTG
GAGGGCCAGACGGAAGGGGAAAAGAAGAAGGAACACCTGCAGGGACGAAC
GAACAGCAGCAGCAGCAGCAGCAGCTGGAAGAGGATGAGGAGGCTCAAGT
TGTCCAGGAAACAGCTGAGGCCATTTGTATAGAAGAAATTTCCAGCCACG
TGCAGCTGGAGCTAGAACGAGTCGCCCTCCACGAGTCCGTGATGAAGGCG
ACGGCGGACAAGTTTCGCCGCCGGCGGCAGAGCCTCGCCGTTATCCTGTG
GTGCGGTCTGACGGCGATGTACCGGGATTGCAGGGCCAGGGCCCGGCGTA
CCTTCGTGTCGGAGTGCGCCGCAGATGTCGGCAGGACAAAGCAGCTCGCT
TCTTCTCCTTCCTCCGGTGGTGGAAGCACCGGCGAAGGACAAAACTTCCC
TCTTCCTCCTCCTCCCCCGGCGGGTGGAACAGAAGACGTCTTGAACGAGT
ACTGTGGTAGCGGTAGCGGCACTTTAAGTGGTTGCTGGGAAAGCGATAAC
AGCATCGATAGACCTAGTGGCGTTGACGTCGCCGTTTCGCCACCAGACGT
CCAGGACGCGCTCAGAGAAACAACAGCGACGACAGGAGGGCCGGGAGGGG
CGGGGCACTGCGAGAGAAAACGAGCCACGCGAGAGCTTCGTAGTGAGGCC
AGCCGCGTCGTCCGCTGGGACAAGCTCCAGCGAGAAGTCTTGCGGAGGAG
CACCTCCGAGGTCACTAGGCTCCTAACCTCCGACGGACTGCGCCGACACG
ATGGCGGCGGGTGGCCCAACGCTTGGCGACAGCGGGGTGACCGCCGTGGC
GGGGACGACGGGGTAGCGGAGTCTACACTGGTACGTGTGCAACGTTGATG
AGATACGCCACGGGCTTGAGGATTCGTCGTTGGCAGCAAGTCCCTTTGGG
ACCCGCACACTTGGTTTGGGGGAGGATTCAGACGGAATGACGATGCGCAC
CCTCCGTCGTCCACGTATCCTGCTCGCCTTCCATAGCGCCTGTGGTAATG
CATGGTAGATTCTGGGTGGGTGTGCAGAGCAAAACGTGTGGGAGCGTGTC
CGTCCGCGAAGCTCAAACTTGATGGAAAACGTTTTAGAACTGATTCGTGT
CTCCCTCGCATCGAAACCGGGATTCGTCGACCACAACGGTACACAACAGT
CGACCACTGCGCACGGATTCGGTCAGGTTCATCCCACAGGCGTTCTCCGA
CTTGTTTCATAGGCCGTGCACAAGCGTGCGAGACTTTCCATGCGCGAGCT
GAGGGGGCGGCAGGCGGACGCGTCCTTGGAGGCAAGGAGCATCGAGCGGT
CCTGGATAGCGTCCCTGGCCAAGTGGGAGGCCCAGCTGGTCAAAGCTCGC
GCCGCGGCAGCTGATGCAGAGGTTCGGGAATTGCGGATTCTGCAACTGGA
GGATGCAGAGGTGGGGGGAAGGGGAAGGGGAAGGATGCGTGTTAACATGG
ATTGTTGACCACTGACTGCGCGGCTCAGATGAGGCGGTACACTGTTGCGA
TTACCCCACCTTCCAACCTTATAAAAGTCTATGCTCTCCACGCGAGTGCG
GCGGTTTTTTCCTTGCGTCCTTGCGCCCTGCGAAACCGTGTATAGCGAGG
GTGCACACGTTGCTTTTTTCTGCTCAATGGGGATGCAGCTGCTTCAGTAA
AAACAATGCGAATGGTATTTTCCCCAGAACATCTAAACGAATAGGAGATG
TCCCGAATTGTTCGGGCACACCGAGAAACGTTTATACGGGGGTTTAATTT
TTTCCTAGGTAAACAGAATCTCACCGAAAGACTACCCGTTCGAGATATAA
CCACAGCAGTCGAAAGGGACGCGCTGAGGTCTGTTCAGTGAGTGAGGGAG
ACCGGCTTGAGACTTTTCACAGTCATTGTGGCAATTTGTACGGAAAGCCG
TCAGTGCCACCTTTAAGGTCACAAGATCGGAGTCTTCGCGCAAGGCACAA
CCAAAACGTTCGCGCCGTTTTACTCGTCACTGAAGATGGCAATGGGTTCT
ATGGGCTTGGCAACATCTCTCCAAAACACGCATTTTCCCGCCGTTCAAAT
TATTTCTTCGTCCACATCCATCGGGAGCAGAAATGGTCTTTATTCTGCAC
GCAAGTCTTGAGCGGCTCACGATATGAACGCAGCCGATAACCCCCGCCCG
TCAGAATGAGAGTTTCCCAACCCAGCAGTCCATCGGCAATGATGAGAAGA
TTCGTACATGACTCAACCACCATCCCTTCGGAAACAGAGCAGCCATCTGC
ACCTGCCTCATCTACACCCCCGGACTCCTTCGTATGCTGGCCCACGCGAC
GTCGCACCGTTTTCCTGCTGCAAGCAAGCTCGCCACCGCCACCAGCACCA
CGATTTCCAACAATACCCCTGTCTGATCGCCGCCGATTCACGTTCAAATC
AAACTTCACGTGAGTCAACCCAGGCGTTGGCCACCCACGAGAACACCGTA
GCCATGTCACTCGCTAGAAGACGCGAAGCACTGACTCGTTGCTGGGAGGC
TGTGTTCGAGGCGGAACGCGTCCGAATAGGTGATGCAGTCGGAGCCTGGC
GCCACTGCCTGCTCGGAGCGTGCAGTATGCTGCGGGAACTTGTAGAGGAT
TCGCGACGGCGGCGTCTCCGCACTGCGGAAGATTGGAAAGATGAGGTACG
GGTCTCGCGAACGATGCAAATCCCAAGACGCCATTTACCCTGCTCGCCCC
TGCCCCCAAACCCGCGACGTTGCCGTGACGAAATCAACGCGAATGACGCG
TTTTCGGACGATGAAATTTGAGCCGCCGGAAAGATCTGACTAGATACTCT
ACACGCCGTGAGAGTGCTAGATGCTCCGGTATAGTCATAAATCGGTGAGA
AAATGGGCGTTGCCACCATTTCTCTGGCACGGGTGCGCTAATGCAAAGGT
ATTGCGCAACTGTTGGTGACGAATAAGTGATAGTCGGCACCCAATTACGA
CGATATGAGATCAAAGCAGGCCGTGATTCAAGCTACATTTGACGACGACA
TCCGCGCTTCATACTCTGACTTGTAACCATGGCAAGTAGGGTAGACTATC
CACCTACTATCAGAATGCGCGTGGGTATATCCGGCAAGGAGTCGGAGCGT
ATTGATATACAACAACAACCGCAGCAGCAGAAATATCAACAGCGCAGGTG
GATCGCGCGTCCAGCACGTCTCCCAATATGGTCCCTCCCCCTTTGCAATA
ATAAAATCAACAGACAGCAAGAGCGCTCCAAGTATCGCAGTCGTTGGCGG
ACGTGGTCGACAGAGAACAGAACCTAGTCGATGACGCCCAGTCAGCCCTC
GTTGTGGACCTGGCGAAGATCGTCGCTGACGAGAACGCGAAGAGAGCCGA
AGTCGCGGCCATCGCTCGGCGACATTGGTGGGCCGAAGCCAGGGAGAGCC
TCCTGGACCTTTTCCACTCGGTGCACAGCAGCAATCGGAACGATCAAGAG
CGCGGCGGCGGCTACGCAGACGTTGACGTCGGTATCCATGGTGGTGGTTC
TGCCGCCGAGAAGCCGGCCACTACGTCATCGGCATCCCTGCAGCTTATCC
GGACTAGCCTGGACGAATTGCTCAGGGCGGAAGAAACTCTAATCGAAAAA
GCTGCGAGAGACTTCCTCACTGCCGCCAACGCCGGTGAATACGGTGGAGG
AGGAGGAGGCCCGCTACACGTCGCGGCGGCGGAGAATCAACAGTACACCA
ATGAGGTACTAGAGCGATGCACGAAAGCTGTCGAAGCCGCTAGCTTTGAT
CCGCCGACCTCGACAGTCGGGCAACCCACGCCGGCGAATCTAAATCAGTG
GCCAACGGAAGGAGGCAGCAGCAGCGGCCGCCTTGGTGGGGCACAAAATC
CCGAAGAAGAACTAGCATCTTTTCGGGGTATACTTGAGACGGACGCGGTC
CAGCTAGCGGTTGCGTCTTTTGAGACGGAGGTCAGGGAGTGGGCGGTTGA
CGCTGCAATCCCAGTGACTCCATCAGAGGCGGTGCTGCCGCCGTGTCTTG
CGGGAGCACCATCAACCATCGTGGAAATCGAGGGCAAGGGGTCACCGCCA
CCGTTTCCGTTCATTGGCCGACCGCCGTCAAGCGACCTAACCAGGTCGCA
GTTCGATCTCGGGCGGGTTGCAAGAGTCAAAGCCTTTGCGAGAACCATGG
AAGACATGTTGTCTAGAGCACGTAAGGCTCTTCTCAAGGAAACGCTCAAG
back to topCoding sequence (CDS) from alignment at Ecto-sp13_S_contig1334:9308..17507+ >mRNA_Ecto-sp13_S_contig1334.2673.1 ID=mRNA_Ecto-sp13_S_contig1334.2673.1|Name=mRNA_Ecto-sp13_S_contig1334.2673.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=3429bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1334:9308..17507+ (Ectocarpus species13 EcNAP12_S_4_19m) ATGGTGCGCATGTTGACTAGTGGCATCGTATTCGGTGGGCCGATGGACTC CACGTTGGCAATTTGTCGATGTGTGGTGCACAAGCAGGACAGCTCCGGCC ACCAGCGGGATAATTGCATGGGCCCGAGTTTGAACATCAACCCATCTAGC ATCAGCAGTAGCAATCACGCCACGAGCCCGAAGAGCCTGCACAGCCTATC GCTATCAGCCTTAGGAAGAAGAAGCGAGGGGGCACGGGGAAAAAGCGAAA GAGGAAGAGGACGAGGACGAGGAGTAGGAGGGCCGGTACAGTCAAGACGC TTGCCACTGCTATCGCCGCCACGCATGCTGAAGCAGAGCCGCCCCTCGCC TACGAAGGGACAGAAGCTCCCCACTCTCCGTGCGGTAGGAAGAAGCAAAA CCAGGAGCGGGGAAGCTAGCTCCAACAGCTGCAGCAGGCAGCGACGCGTG TCGAAACGAGGAAGGGCTACTGATCGAGAACACACCGCACCGGACAAAAG CAATGGACCCAGCAATGACTCTCACCGATTCGCAAGGAAGATCCCAGTTG AGCAGGAGAGGAAAATGTACAGCTGCAATGGGTCACCAATGCTAGATTGC GGTCGCGGCCGCAGAGCCGAAGACGGTGATGAGTTCACCGCGTTGTCAGC CTCACCGCGCTCCGTCAACTCCGCCGACTCGTTCGGAACGCTCGCGTCAA CCGGCGAGGAGTCGTTCTCTCTGGAATTGGACGGCAACGGCAACGGGAGC TTGGCACATGAAGGCGAGGCCGATATTGTTGGTGGTAATGGTACCGCGGA GGCTGGAAGCGCCAGCAGAGGGCTGGGAATCGTCGACAGGATGCTGTTCG ATAGCTGGAAGGAATTGCCGTGGCAGGCACGCTTGTGCCCGAAGGCTATC GAAGGGCAGGAGGTGGTTCGCAGGACCTCCGCTCTAGAGATGGAGAGCCT TCGGGTGCAAGGTTGGAGACGGACGCAACAGCTTTTAGCTATGAGCGCGG CACGAGAGGAGGAACAGAGGATCTCGGGGTGGTGGAAAGGAGAAGCCGAG AAACTGTGGAGGATGCAATCGCAGCGTCGCCAGAATCACGAGACGCTTGC GGCTCGCCACGAGGCGGAGCTTGCGGCTCGCGAGGACAAGCGAACTGAGC TACTAAGCGAGGGATACGGCCGAGAGCTAGCGAAGCTCGATAGCATGGAC GAGGCGAACCACCTGCAAAGCCTGCGGCAAGTGGAAACGCTGTTTTCGTT CGCCGTTGGCGACAGCATTAGCGTAGAGGAAACGCAAAACACCACAACTC CGAAAGCGGGAGTGACAACCGGTGCCGCCGCGGAAGGGCTTGACACGGTG GCGGCCCCTGGCGCCTACGCCACGCCTCCCGGCACCACCCTACGAACAAA CGCGCGGCCGCCTGGAGGGCCAGACGGAAGGGGAAAAGAAGAAGGAACAC CTGCAGGGACGAACGAACAGCAGCAGCAGCAGCAGCAGCTGGAAGAGGAT GAGGAGGCTCAAGTTGTCCAGGAAACAGCTGAGGCCATTTGTATAGAAGA AATTTCCAGCCACGTGCAGCTGGAGCTAGAACGAGTCGCCCTCCACGAGT CCGTGATGAAGGCGACGGCGGACAAGTTTCGCCGCCGGCGGCAGAGCCTC GCCGTTATCCTGTGGTGCGGTCTGACGGCGATGTACCGGGATTGCAGGGC CAGGGCCCGGCGTACCTTCGTGTCGGAGTGCGCCGCAGATGTCGGCAGGA CAAAGCAGCTCGCTTCTTCTCCTTCCTCCGGTGGTGGAAGCACCGGCGAA GGACAAAACTTCCCTCTTCCTCCTCCTCCCCCGGCGGGTGGAACAGAAGA CGTCTTGAACGAGTACTGTGGTAGCGGTAGCGGCACTTTAAGTGGTTGCT GGGAAAGCGATAACAGCATCGATAGACCTAGTGGCGTTGACGTCGCCGTT TCGCCACCAGACGTCCAGGACGCGCTCAGAGAAACAACAGCGACGACAGG AGGGCCGGGAGGGGCGGGGCACTGCGAGAGAAAACGAGCCACGCGAGAGC TTCGTAGTGAGGCCAGCCGCGTCGTCCGCTGGGACAAGCTCCAGCGAGAA GTCTTGCGGAGGAGCACCTCCGAGGTCACTAGGCTCCTAACCTCCGACGG ACTGCGCCGACACGATGGCGGCGGGTGGCCCAACGCTTGGCGACAGCGGG GTGACCGCCGTGGCGGGGACGACGGGGTAGCGGAGTCTACACTGGCCGTG CACAAGCGTGCGAGACTTTCCATGCGCGAGCTGAGGGGGCGGCAGGCGGA CGCGTCCTTGGAGGCAAGGAGCATCGAGCGGTCCTGGATAGCGTCCCTGG CCAAGTGGGAGGCCCAGCTGGTCAAAGCTCGCGCCGCGGCAGCTGATGCA GAGGTTCGGGAATTGCGGATTCTGCAACTGGAGGATGCAGAGACAGCAAG AGCGCTCCAAGTATCGCAGTCGTTGGCGGACGTGGTCGACAGAGAACAGA ACCTAGTCGATGACGCCCAGTCAGCCCTCGTTGTGGACCTGGCGAAGATC GTCGCTGACGAGAACGCGAAGAGAGCCGAAGTCGCGGCCATCGCTCGGCG ACATTGGTGGGCCGAAGCCAGGGAGAGCCTCCTGGACCTTTTCCACTCGG TGCACAGCAGCAATCGGAACGATCAAGAGCGCGGCGGCGGCTACGCAGAC GTTGACGTCGGTATCCATGGTGGTGGTTCTGCCGCCGAGAAGCCGGCCAC TACGTCATCGGCATCCCTGCAGCTTATCCGGACTAGCCTGGACGAATTGC TCAGGGCGGAAGAAACTCTAATCGAAAAAGCTGCGAGAGACTTCCTCACT GCCGCCAACGCCGGTGAATACGGTGGAGGAGGAGGAGGCCCGCTACACGT CGCGGCGGCGGAGAATCAACAGTACACCAATGAGGTACTAGAGCGATGCA CGAAAGCTGTCGAAGCCGCTAGCTTTGATCCGCCGACCTCGACAGTCGGG CAACCCACGCCGGCGAATCTAAATCAGTGGCCAACGGAAGGAGGCAGCAG CAGCGGCCGCCTTGGTGGGGCACAAAATCCCGAAGAAGAACTAGCATCTT TTCGGGGTATACTTGAGACGGACGCGGTCCAGCTAGCGGTTGCGTCTTTT GAGACGGAGGTCAGGGAGTGGGCGGTTGACGCTGCAATCCCAGTGACTCC ATCAGAGGCGGTGCTGCCGCCGTGTCTTGCGGGAGCACCATCAACCATCG TGGAAATCGAGGGCAAGGGGTCACCGCCACCGTTTCCGTTCATTGGCCGA CCGCCGTCAAGCGACCTAACCAGGTCGCAGTTCGATCTCGGGCGGGTTGC AAGAGTCAAAGCCTTTGCGAGAACCATGGAAGACATGTTGTCTAGAGCAC GTAAGGCTCTTCTCAAGGAAACGCTCAAG back to top
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