mRNA_Ecto-sp13_S_contig1024.267.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig1024.267.1
Unique NamemRNA_Ecto-sp13_S_contig1024.267.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1024.267.1 vs. uniprot
Match: D7FRD4_ECTSI (Retinitis pigmentosa 2 (X-linked recessive) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRD4_ECTSI)

HSP 1 Score: 280 bits (716), Expect = 3.750e-90
Identity = 146/194 (75.26%), Postives = 153/194 (78.87%), Query Frame = 1 
Query:   79 AAAREGNVTRGTVDKGNLNPSDFIFSRKQKEVIVREPGSIGGQQFIVEECSECEVYLLDHTAALTIDLCTDCRIIVGPCESRQDTPLFLKRFSKKNSSVFIRDCKDCTMVVACQQFRARXXXXXTFFLFSATQPVIESSVGLRFACYTLDYFSLAGQFAAAKLSVWNNKWSQIYNFTGGGEGDWSCLPEGSHHR 660
            AAA  G++TRG +DKGNLNPSDFIFS KQKEVIVREPGSIGGQQFIVEECSECEVYLLDHTAALTIDLC       GPC                            T+VVACQQFRAR XXXXTFFLFSATQPVIESSVGLRF CYTLDYFSLAGQFAAAKLSVWNN+WSQI+NFTGGG+GDWSCLPEGSHHR
Sbjct:   22 AAAGGGSLTRGALDKGNLNPSDFIFSCKQKEVIVREPGSIGGQQFIVEECSECEVYLLDHTAALTIDLCXXXXXXXGPCXXXXXXXXXXXX----------------TVVVACQQFRARDXXXXTFFLFSATQPVIESSVGLRFGCYTLDYFSLAGQFAAAKLSVWNNRWSQIHNFTGGGDGDWSCLPEGSHHR 199
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BLAST of mRNA_Ecto-sp13_S_contig1024.267.1 vs. uniprot
Match: A0A6H5J9Z2_9PHAE (C-CAP/cofactor C-like domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9Z2_9PHAE)

HSP 1 Score: 181 bits (460), Expect = 1.000e-54
Identity = 104/151 (68.87%), Postives = 106/151 (70.20%), Query Frame = 1 
Query:   82 AAREGNVTRGTVDKGNLNPSDFIFSRKQKEVIVREPGSIGGQQFIVEECSECEVYLLDHTAALTIDLCTDCRIIVGPCESRQDTPLFLKRFSKKNSSVFIRDCKDCTMVVACQQFRARXXXXXTFFLFSATQPVIESSVGLRFACYTLDYF 534
            AA  G+VTRGTVDKGNLNPSDFIFSRKQKEVIVREPGSIGGQQFIVEECSECEVYLLDHTAALTIDL                                          VACQQFRAR XXXXTFFLFSATQPV+ESSVGLRFACYTLDYF
Sbjct:   23 AAGGGSVTRGTVDKGNLNPSDFIFSRKQKEVIVREPGSIGGQQFIVEECSECEVYLLDHTAALTIDL----------------XXXXXXXXXXXXXXXXXXXXXXXXXXVACQQFRARDXXXXTFFLFSATQPVVESSVGLRFACYTLDYF 157
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BLAST of mRNA_Ecto-sp13_S_contig1024.267.1 vs. uniprot
Match: G4ZD48_PHYSP (Protein XRP2 n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZD48_PHYSP)

HSP 1 Score: 174 bits (442), Expect = 1.610e-49
Identity = 87/176 (49.43%), Postives = 111/176 (63.07%), Query Frame = 1 
Query:  130 LNPSDFIFSRKQK-EVIVREPGSIGGQQFIVEECSECEVYLLDHTAALTIDLCTDCRIIVGPCESRQDTPLFLKRFSKKNSSVFIRDCKDCTMVVACQQFRARXXXXXTFFLFSATQPVIESSVGLRFACYTLDYFSLAGQFAAAKLSVWNNKWSQIYNFTGGGEGDWSCLPEGSH 654
            L   DFIFS  Q    + + PGSI GQQF++E+C  C+++LLDH  ++ ID C +CRI+VGPCES                SVF+RDCK CT+V A QQFR R       +L+SAT+P+IE+S  LRFAC+ L YFSL  QF  AK S WNNKWS+I++FT    G W+ LP   H
Sbjct:   47 LKREDFIFSNIQTASFLAKLPGSINGQQFLIEDCHNCDIFLLDHCTSVQIDACVNCRIVVGPCES----------------SVFLRDCKKCTVVCAAQQFRTRDCEDLDVYLYSATEPIIETSSRLRFACFPLTYFSLQQQFRQAKFSAWNNKWSEIFDFTPD-HGGWTPLPMHPH 205
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BLAST of mRNA_Ecto-sp13_S_contig1024.267.1 vs. uniprot
Match: V9G2C2_PHYPR (Protein XRP2 n=8 Tax=Phytophthora parasitica TaxID=4792 RepID=V9G2C2_PHYPR)

HSP 1 Score: 174 bits (441), Expect = 2.670e-49
Identity = 87/176 (49.43%), Postives = 112/176 (63.64%), Query Frame = 1 
Query:  130 LNPSDFIFSRKQK-EVIVREPGSIGGQQFIVEECSECEVYLLDHTAALTIDLCTDCRIIVGPCESRQDTPLFLKRFSKKNSSVFIRDCKDCTMVVACQQFRARXXXXXTFFLFSATQPVIESSVGLRFACYTLDYFSLAGQFAAAKLSVWNNKWSQIYNFTGGGEGDWSCLPEGSH 654
            L   DFIFS  Q    + + PGSI GQQF++E+C  C+++LLDH  ++ ID C +CRI+VGPCES                SVF+R+CK CT+V A QQFRAR     + +L+SAT+P+IE S GLRFAC+ L YFSL  QF  AK S WNNKWS++++FT    G W  LP   H
Sbjct:   41 LKREDFIFSNIQTASFLAKLPGSINGQQFLIEDCHNCDIFLLDHCTSVQIDACINCRIVVGPCES----------------SVFLRNCKRCTVVCAVQQFRARDCEDVSVYLYSATEPIIEMSSGLRFACFPLTYFSLQQQFRQAKFSPWNNKWSELFDFTPD-HGGWKPLPMRPH 199
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BLAST of mRNA_Ecto-sp13_S_contig1024.267.1 vs. uniprot
Match: A0A329T3Q5_9STRA (Protein XRP2 n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329T3Q5_9STRA)

HSP 1 Score: 174 bits (441), Expect = 2.800e-49
Identity = 98/226 (43.36%), Postives = 127/226 (56.19%), Query Frame = 1 
Query:    1 MGNL-------FGKDCPEQKKTKKHGAGVGWNPAAAREGNVTRGTVDKGNLNPSDFIFSRKQK-EVIVREPGSIGGQQFIVEECSECEVYLLDHTAALTIDLCTDCRIIVGPCESRQDTPLFLKRFSKKNSSVFIRDCKDCTMVVACQQFRARXXXXXTFFLFSATQPVIESSVGLRFACYTLDYFSLAGQFAAAKLSVWNNKWSQIYNFTGGGEGDWSCLPEGSH 654
            MGN+        G D   + K+K   A  G + AA   G           L   DFIFS  Q    + + PGSI GQQF++E+C  C+++LLDH  ++ ID C +CRI+VGPCES                SVF+R+CK CT+V A QQFR R     + +L+SAT+P+IE+S GLRFAC+ L YFSL  QF   K S WNNKWS+I++FT    G W  LP   H
Sbjct:    1 MGNICHAGPPALGADAKPRSKSKSR-ASTGSSKAAPTFGKDP-------TLKREDFIFSNIQTASFLAKLPGSINGQQFLIEDCHNCDIFLLDHCTSVQIDACVNCRIVVGPCES----------------SVFLRNCKRCTVVCAVQQFRTRDCEDVSVYLYSATEPIIETSSGLRFACFPLTYFSLQQQFRQVKFSPWNNKWSEIFDFTPD-HGGWKPLPMRPH 201
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BLAST of mRNA_Ecto-sp13_S_contig1024.267.1 vs. uniprot
Match: A0A2D4BH13_PYTIN (XRP2-like protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BH13_PYTIN)

HSP 1 Score: 173 bits (439), Expect = 4.190e-49
Identity = 83/176 (47.16%), Postives = 110/176 (62.50%), Query Frame = 1 
Query:  130 LNPSDFIFSRKQKEVIVRE-PGSIGGQQFIVEECSECEVYLLDHTAALTIDLCTDCRIIVGPCESRQDTPLFLKRFSKKNSSVFIRDCKDCTMVVACQQFRARXXXXXTFFLFSATQPVIESSVGLRFACYTLDYFSLAGQFAAAKLSVWNNKWSQIYNFTGGGEGDWSCLPEGSH 654
            L   D+IFS       + + PGSI GQQF++E CSEC++++LDH  A+ ID C +CRI++GPCES                S+F+R+CK CT+V A QQFR R       +L+S+T+P+IESS  +RFACY + YFSL  QF  AK SVWNN+WS++YNFT    G W  L    H
Sbjct:   39 LKKEDYIFSNIHAPTFLAKLPGSINGQQFLIENCSECDIFVLDHCTAVQIDDCVNCRIVIGPCES----------------SLFLRNCKQCTIVCAVQQFRTRDCEDIDVYLYSSTEPIIESSTRMRFACYPMTYFSLQHQFDQAKFSVWNNRWSEVYNFTPD-HGSWKALSTSCH 197
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BLAST of mRNA_Ecto-sp13_S_contig1024.267.1 vs. uniprot
Match: A0A8K1FEW1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FEW1_PYTOL)

HSP 1 Score: 171 bits (434), Expect = 1.970e-48
Identity = 81/176 (46.02%), Postives = 114/176 (64.77%), Query Frame = 1 
Query:  130 LNPSDFIFSRKQK-EVIVREPGSIGGQQFIVEECSECEVYLLDHTAALTIDLCTDCRIIVGPCESRQDTPLFLKRFSKKNSSVFIRDCKDCTMVVACQQFRARXXXXXTFFLFSATQPVIESSVGLRFACYTLDYFSLAGQFAAAKLSVWNNKWSQIYNFTGGGEGDWSCLPEGSH 654
            L   DFIFS  Q    +V+ PGS+ GQQF++E C +C++++LDH  ++ ID C +CRI++GPC                N+S+F+R+C+DCT+V A QQFR R       +L+SAT+P+IE+S  +RFAC+ L YF+L  QF AAK SVWNN+WS+IYNFT    G W  +   +H
Sbjct:   32 LKREDFIFSNVQSASFLVKLPGSVNGQQFLIEACRDCDIFVLDHCTSVQIDDCVNCRIVIGPC----------------NASLFLRNCRDCTLVCAVQQFRTRDCEKIDVYLYSATEPIIETSSQMRFACFPLAYFNLQQQFDAAKFSVWNNRWSEIYNFTPE-HGAWKAISTQTH 190
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BLAST of mRNA_Ecto-sp13_S_contig1024.267.1 vs. uniprot
Match: A0A2P4YDP5_9STRA (Protein XRP2 n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YDP5_9STRA)

HSP 1 Score: 171 bits (433), Expect = 3.270e-48
Identity = 86/176 (48.86%), Postives = 108/176 (61.36%), Query Frame = 1 
Query:  130 LNPSDFIFSRKQK-EVIVREPGSIGGQQFIVEECSECEVYLLDHTAALTIDLCTDCRIIVGPCESRQDTPLFLKRFSKKNSSVFIRDCKDCTMVVACQQFRARXXXXXTFFLFSATQPVIESSVGLRFACYTLDYFSLAGQFAAAKLSVWNNKWSQIYNFTGGGEGDWSCLPEGSH 654
            L   DFIFS  Q    + + PGSI GQQF++EEC  C+++LLDH  ++ ID C +CRI+VGPCES                SVF+R+CK CT++ A QQFR R       +L+S T P+IE+S  LRFAC+ L YFSL  QF  AK S WNNKWS+I+NFT    G W  LP   H
Sbjct:   44 LKREDFIFSNIQTASFLAKLPGSINGQQFLIEECHNCDIFLLDHCTSVQIDACVNCRIVVGPCES----------------SVFLRNCKRCTVICAVQQFRTRDCEDVDVYLYSVTDPIIETSSRLRFACFPLTYFSLQQQFRQAKFSPWNNKWSEIFNFTPD-HGGWKPLPMHPH 202
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BLAST of mRNA_Ecto-sp13_S_contig1024.267.1 vs. uniprot
Match: A0A6A4FTT6_9STRA (Protein XRP2 n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A4FTT6_9STRA)

HSP 1 Score: 169 bits (429), Expect = 1.780e-47
Identity = 87/176 (49.43%), Postives = 110/176 (62.50%), Query Frame = 1 
Query:  130 LNPSDFIFSRKQK-EVIVREPGSIGGQQFIVEECSECEVYLLDHTAALTIDLCTDCRIIVGPCESRQDTPLFLKRFSKKNSSVFIRDCKDCTMVVACQQFRARXXXXXTFFLFSATQPVIESSVGLRFACYTLDYFSLAGQFAAAKLSVWNNKWSQIYNFTGGGEGDWSCLPEGSH 654
            L   DFIFS  Q    + + PGSI GQQF++E+C  C+++LLDH  ++ ID C +CR++VGPCES                SVF+RDCK CT+V   QQFRA        FL+SAT+PVIE+S  LRFAC+ L YFSL  QF  AK S WNNKWS+I++FT    G W+ LP   H
Sbjct:   39 LKREDFIFSNIQTASFLAKLPGSINGQQFLIEDCHNCDIFLLDHCTSVQIDGCVNCRVVVGPCES----------------SVFLRDCKRCTVVCVAQQFRACDCEDMDVFLYSATEPVIETSSRLRFACFPLTYFSLQQQFRQAKFSAWNNKWSEIFDFTPDC-GGWTPLPMHPH 197
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1024.267.1 vs. uniprot
Match: A0A421GK69_9STRA (Protein XRP2 n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421GK69_9STRA)

HSP 1 Score: 169 bits (428), Expect = 2.230e-47
Identity = 84/172 (48.84%), Postives = 107/172 (62.21%), Query Frame = 1 
Query:  130 LNPSDFIFSRKQK-EVIVREPGSIGGQQFIVEECSECEVYLLDHTAALTIDLCTDCRIIVGPCESRQDTPLFLKRFSKKNSSVFIRDCKDCTMVVACQQFRARXXXXXTFFLFSATQPVIESSVGLRFACYTLDYFSLAGQFAAAKLSVWNNKWSQIYNFTGGGEGDWSCLP 642
            L   DFIF   Q    + + PGSI GQQF++E+C  C+++LLDH  ++ ID C +CRI+VGPCES                SVF+RDCK CT+V A QQFR R       +L+SAT+P+IE+S  ++FAC+ L YFSL  QF  AK S WNN WS+IYNFT    G W  LP
Sbjct:   37 LKREDFIFCNIQTASFLAKLPGSINGQQFLIEDCHNCDIFLLDHCTSVQIDACVNCRIVVGPCES----------------SVFLRDCKRCTLVCAVQQFRTRDCEDVDVYLYSATEPIIETSSCMKFACFPLTYFSLQQQFRQAKFSPWNNHWSEIYNFTPD-HGGWKPLP 191
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1024.267.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRD4_ECTSI3.750e-9075.26Retinitis pigmentosa 2 (X-linked recessive) n=1 Ta... [more]
A0A6H5J9Z2_9PHAE1.000e-5468.87C-CAP/cofactor C-like domain-containing protein n=... [more]
G4ZD48_PHYSP1.610e-4949.43Protein XRP2 n=1 Tax=Phytophthora sojae (strain P6... [more]
V9G2C2_PHYPR2.670e-4949.43Protein XRP2 n=8 Tax=Phytophthora parasitica TaxID... [more]
A0A329T3Q5_9STRA2.800e-4943.36Protein XRP2 n=2 Tax=Phytophthora TaxID=4783 RepID... [more]
A0A2D4BH13_PYTIN4.190e-4947.16XRP2-like protein n=1 Tax=Pythium insidiosum TaxID... [more]
A0A8K1FEW1_PYTOL1.970e-4846.02Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A2P4YDP5_9STRA3.270e-4848.86Protein XRP2 n=1 Tax=Phytophthora palmivora var. p... [more]
A0A6A4FTT6_9STRA1.780e-4749.43Protein XRP2 n=2 Tax=Phytophthora TaxID=4783 RepID... [more]
A0A421GK69_9STRA2.230e-4748.84Protein XRP2 n=3 Tax=Phytophthora kernoviae TaxID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1024contigEcto-sp13_S_contig1024:351..3260 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score281.2
Seed ortholog evalue4.2e-73
Seed eggNOG ortholog2880.D7FRD4
Preferred nameRP2
Model size663
KEGG koko:K18272
Hectar predicted targeting categoryother localisation
GOsGO:0001654,GO:0001655,GO:0001822,GO:0001894,GO:0001895,GO:0001947,GO:0002009,GO:0003007,GO:0003008,GO:0003143,GO:0003407,GO:0003674,GO:0005096,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005794,GO:0005814,GO:0005815,GO:0005856,GO:0005886,GO:0005929,GO:0006457,GO:0006810,GO:0006892,GO:0007275,GO:0007368,GO:0007389,GO:0007399,GO:0007423,GO:0007507,GO:0007600,GO:0007601,GO:0008047,GO:0008150,GO:0009653,GO:0009790,GO:0009799,GO:0009855,GO:0009887,GO:0009888,GO:0009987,GO:0010842,GO:0012505,GO:0015630,GO:0016020,GO:0016043,GO:0016192,GO:0016604,GO:0022008,GO:0030154,GO:0030182,GO:0030234,GO:0030695,GO:0031410,GO:0031974,GO:0031981,GO:0031982,GO:0032501,GO:0032502,GO:0035050,GO:0035239,GO:0035295,GO:0035845,GO:0036064,GO:0042461,GO:0042592,GO:0042995,GO:0043010,GO:0043085,GO:0043087,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043547,GO:0044093,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044430,GO:0044441,GO:0044444,GO:0044446,GO:0044450,GO:0044451,GO:0044459,GO:0044463,GO:0044464,GO:0045494,GO:0046530,GO:0048193,GO:0048468,GO:0048513,GO:0048562,GO:0048568,GO:0048592,GO:0048593,GO:0048598,GO:0048646,GO:0048666,GO:0048699,GO:0048729,GO:0048731,GO:0048793,GO:0048856,GO:0048869,GO:0048871,GO:0050790,GO:0050877,GO:0050953,GO:0051082,GO:0051179,GO:0051234,GO:0051336,GO:0051345,GO:0060041,GO:0060042,GO:0060249,GO:0060429,GO:0060562,GO:0060589,GO:0061371,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0071840,GO:0071944,GO:0072001,GO:0072359,GO:0090596,GO:0097708,GO:0098590,GO:0098772,GO:0120025,GO:0120038,GO:1990075
Exons5
EggNOG free text desc.post-chaperonin tubulin folding pathway
EggNOG OGsKOG2512@1,KOG2512@2759
Cds size663
COG Functional cat.Q
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04147
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462518.2732801-CDS-Ecto-sp13_S_contig1024:350..4771681462518.2732801-CDS-Ecto-sp13_S_contig1024:350..477Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1024 351..477 -
1681462518.2829766-CDS-Ecto-sp13_S_contig1024:1524..17261681462518.2829766-CDS-Ecto-sp13_S_contig1024:1524..1726Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1024 1525..1726 -
1681462518.2915287-CDS-Ecto-sp13_S_contig1024:2058..22211681462518.2915287-CDS-Ecto-sp13_S_contig1024:2058..2221Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1024 2059..2221 -
1681462518.3006442-CDS-Ecto-sp13_S_contig1024:2514..26061681462518.3006442-CDS-Ecto-sp13_S_contig1024:2514..2606Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1024 2515..2606 -
1681462518.3096151-CDS-Ecto-sp13_S_contig1024:3181..32601681462518.3096151-CDS-Ecto-sp13_S_contig1024:3181..3260Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1024 3182..3260 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1024.267.1prot_Ecto-sp13_S_contig1024.267.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig1024 351..3260 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig1024.267.1

>prot_Ecto-sp13_S_contig1024.267.1 ID=prot_Ecto-sp13_S_contig1024.267.1|Name=mRNA_Ecto-sp13_S_contig1024.267.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=221bp
MGNLFGKDCPEQKKTKKHGAGVGWNPAAAREGNVTRGTVDKGNLNPSDFI
FSRKQKEVIVREPGSIGGQQFIVEECSECEVYLLDHTAALTIDLCTDCRI
IVGPCESRQDTPLFLKRFSKKNSSVFIRDCKDCTMVVACQQFRARDCTDC
TFFLFSATQPVIESSVGLRFACYTLDYFSLAGQFAAAKLSVWNNKWSQIY
NFTGGGEGDWSCLPEGSHHR*
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mRNA from alignment at Ecto-sp13_S_contig1024:351..3260-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig1024.267.1 ID=mRNA_Ecto-sp13_S_contig1024.267.1|Name=mRNA_Ecto-sp13_S_contig1024.267.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2910bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1024:351..3260- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGGGAATCTCTTCGGCAAGGACTGCCCAGAACAAAAAAAAACCAAGAA
GCATGGTGCAGGCGTCGGTTGGAATCCTGGTGTGTATGCATCGGTGTGCC
AGCCTGTTCTTGTCGGCTACAACCTCGGATCTTTCGTTCCGCGCGAGAGA
TGACTGACCCCGGGTCTCGATGTCGACTTATGACAGAAAGGTTACGACAC
AGTTTCTGCTAGCAACTGCATAGATTTCTCTTTTGCTCCCGCCGACAATC
TTCTGCTTGGAGTTGCGACACGTATCTCTGTCGCAACGTTTTCTTCTCTA
CACTTTACGAAGGACCAAACGCTAAAGGTTGTTTTCAGGTTGCGTAAGGC
GCGTGTCTCTCGCCTCTGGGAAATTAAAGTGGCGTGCGTGTGTGACAAAT
ATCTGTGTGTTGTATTACTAGCATCGACCGCGCCATGCGTGTAAGTTCGT
CAGCGCCCCGGTGTTCGGAAATTCAATAATGCCGTTCTGCGTGCTTGCGC
GACTCACCCCAACCCGTGCTACCTTCGTTGACGTATGCATAGACTACATT
CTTAGGCTCCAATGTAGACAGCAGTATACTGATACCTTGAAAGCAACATC
TGACAGCGACGTTATGGCCCTCGCACAATGCCGGCGTGAACACCTACTGC
CTAGCGGCGGCACGCGAGGGAAACGTTACCAGGGGTACTGTCGACAAGGG
GAATCTCAATCCTAGCGATTTCATCTTCTCGCGCAAGCAGAAAGAGGTGA
GAGGGTTGTTAGCTACTTACACTACATTGTGCGTTGTTGCATGTCCTCTC
GAAATAATGGGAAGCTAGCTTTCGCTGATGGAAGGATAGACTACACTAAT
ATAGCAGAAAATAATCAACGGCGAGAAAACGTGATCAAGCACAGAATATT
GCGTGACACTGGAACTGACGGAGATGCGGCACCTGCTGGCTAACACCAAC
TCTACAGAACGCGAAACCTAAGCATCATCAACCTGTGCGCCGTCAACGCT
TGCTTGCTTTGGTTTCTTCGTGGTTCTCTGTGGCACAAGGTAATCGTGCG
AGAACCTGGTAGCATCGGTGGACAGCAATTCATCGTGGAGGAGTGCTCGG
AGTGCGAGGTGTACCTTCTGGATCACACCGCAGCACTCACTATCGACCTA
TGCACAGACTGCAGGATTATCGTGGGGCCTTGCGAGAGCAGGCAAGATAC
ACGTAAACCTGTACTCTGGGTGCAATGTATAGAAGCTTGTTTTTTTGTAG
GCGGAGAATGAGAGTTTCTTTTGAAAAACTAACGTGTCTGGTTCGAGCAC
GTCGCCGCCTATAGCACAGCGTTTTCGTCGCTGCTCAATATTTGCTTCTA
CGGTGGATATAGGTCGCGATCCCGTATTGAAGATCCCATATCGCCAACCC
TCTTCCGTGTCCCCTACTCTCCACTCGAAAGATCATGCACTGCTCTCCCT
CATAGTCTCGTTTGTTCCAATTTCAAAATGATGTGTACCTGCCAATTCTT
GTCTTCACACGCCCGTTGGGACGCATGCATATAGCGCTGTTTCTGAAACG
ATTTTCGAAAAAAAATTCCAGTGTGTTTATTCGGGACTGCAAGGACTGCA
CCATGGTGGTGGCCTGCCAGCAGTTCCGCGCCCGGGACTGCACGGACTGC
ACCTTCTTTTTGTTCAGTGCCACCCAGCCCGTGATTGAGTCCTCCGTGGG
GCTCCGGTTCGCCTGCTATACGCTGGATTACTTCAGGTACGGCGCCGCAA
TGGATTGAGTACCGAGGTGGCATGGCAGGGGGTAGCGGGGTATTCCATAC
CTTAACATCGTTTCTTGCTTCCGGCGAAAGTATGTTTTTATTGTATGGAA
ATCTTTGATCGTTGTATGGTCGCGATGAGTAACATGAACCGTTTTCTAGG
TTTGAGCCCCAAATATGGTACCCCTTTTCGAATGGAGTCAGCAACACCGA
CTTGGAGGGGTGGGTCCGCTTTCTTCGCGCGCTGTGGGGTCCTTTAAGGA
ATGGCAGATCACAAACTTGTGATGTTCTCAGGCGGAAAGGATGCTTTTTA
TCTCTGCATGTTGGATTAAAGAACAAGAGCAAGAGCCAGCTTTAAAACCC
CTATTCTGCCCCCCTCTATGTGCCTTCCATCCCACCCACTCCATGTTGGA
TCCGTCTGTAAATGGAACGCATATATCGATATTCAGCTTTCTGTCGTGAA
GGGTGGCTGCTTACCTGAGATGAGCAGTTTGCCACGGTGGGAAGAAAACT
GATTTACTTTTACGAGGCTTCCCTCAGAGACGCGGCGTTCCCTCCACGAC
GACGCGATTGTTGATGACGCCATGAGGGCTGAATGTAGTATTTGCAGACA
CCTTTGGCGCAGCTACGGTAGTTGACGTCACGGTTGTTGATATGTAGCAG
CTAAAAACGAAACCGGTCCACGAGGACACGACTCGTGCCAAAATCATGCC
CTTTCCGCCTTTCTTTCTATGATTTCGGGCTAGACTACGCAACGTCCATG
CACACAGGTTTCTCCCTAGTCGACATATCAGGGTCGAAAGTGATCCGTTG
TCATCGCTTTCATTTGATATTGTAGGGGTCAGGCAGTGTTTGGTTCCTGA
CTGGAGCATGACTCACACCAAAATTCCCTCGACCGTTAGGTCAGATCGAT
GCAGAGCCTTTTCAAAAGTGTACAACCTTCATGGCATGCATTTAAAGCGC
GACGCCACTCCGCTTTGTCCCCCTCGTGAGGAATCCCCGTTCGTCCTCGT
GCCCCGCCTATTGCCACCCTTTCAACCCTTTAGTCTGGCTGGCCAGTTCG
CGGCAGCGAAGCTAAGCGTATGGAACAACAAGTGGAGCCAGATATATAAC
TTTACTGGAGGGGGCGAGGGGGATTGGTCGTGCCTTCCCGAAGGATCCCA
CCACAGGTAA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1024:351..3260-

>mRNA_Ecto-sp13_S_contig1024.267.1 ID=mRNA_Ecto-sp13_S_contig1024.267.1|Name=mRNA_Ecto-sp13_S_contig1024.267.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=663bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1024:351..3260- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGGGAATCTCTTCGGCAAGGACTGCCCAGAACAAAAAAAAACCAAGAA
GCATGGTGCAGGCGTCGGTTGGAATCCTGCGGCGGCACGCGAGGGAAACG
TTACCAGGGGTACTGTCGACAAGGGGAATCTCAATCCTAGCGATTTCATC
TTCTCGCGCAAGCAGAAAGAGGTAATCGTGCGAGAACCTGGTAGCATCGG
TGGACAGCAATTCATCGTGGAGGAGTGCTCGGAGTGCGAGGTGTACCTTC
TGGATCACACCGCAGCACTCACTATCGACCTATGCACAGACTGCAGGATT
ATCGTGGGGCCTTGCGAGAGCAGGCAAGATACACCGCTGTTTCTGAAACG
ATTTTCGAAAAAAAATTCCAGTGTGTTTATTCGGGACTGCAAGGACTGCA
CCATGGTGGTGGCCTGCCAGCAGTTCCGCGCCCGGGACTGCACGGACTGC
ACCTTCTTTTTGTTCAGTGCCACCCAGCCCGTGATTGAGTCCTCCGTGGG
GCTCCGGTTCGCCTGCTATACGCTGGATTACTTCAGTCTGGCTGGCCAGT
TCGCGGCAGCGAAGCTAAGCGTATGGAACAACAAGTGGAGCCAGATATAT
AACTTTACTGGAGGGGGCGAGGGGGATTGGTCGTGCCTTCCCGAAGGATC
CCACCACAGGTAA
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