mRNA_Ecto-sp13_S_contig13326.2663.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig13326.2663.1 vs. uniprot
Match: D7FV29_ECTSI (Heat Shock transcription factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV29_ECTSI) HSP 1 Score: 744 bits (1921), Expect = 4.960e-268 Identity = 404/443 (91.20%), Postives = 413/443 (93.23%), Query Frame = 1
Query: 19 VLAFEGLLPSYYNHKKFLSFVRQLNFYGFKKVKGDPASRMSSASSVHPPPSAAAVDESDSWQEFRHPEFRRGRRDLLAGIKRQKDGGRVKRKQAELEKLDTLSNLTTDVDMMSVDLRAANGKLDDIMSMLSSMAGGNLHSSMIPPVQRGNMGKIGDGSFGFGIGGSSSDQNSYDTAKTTSAAAAAFGGDRQQVAGAGSWDGSTNQEDHDPSVHGGPLDQCHTPYLPVGHQQQGWQGHGPYPQPHQPSFSTERCLVAPNQVRYQAAQSHPALPSLPLAVAAHASHVSAAEPRRQQLPPLCYPPRGDGNNLASSGHEQVSGVYESPSNKASPSEIGSGXXXXXXXXXXR-GNFHSVPSLANTSPRVARGQQQPQLAWSYRLQHQQNGGAAQVVSPPRGGCDGDVGAMVGQLEQALSHGAMSGLRVLSHSAVSISQTDKEQQENVN 1344
VLAFEGLLPSYYNHKKFLSFVRQLNFYGFKKVKGDPASRMSSASSVHPPPSA A DESDSWQEFRHPEFRRGRRDLLAGIKRQKDGGRVKRKQAELEKL TLS LTTDVDMMSVDLRAANGKLDDIM MLS MAGGNLHSSMIPPVQRGNMG+ GDGSFGFGIGGSSSDQNSY+TA+T AAAAAFGGDRQQV GAGS DGST+QE HDPSV+G PLDQ HTP LPVGHQQQGWQGHGPYPQPHQPSFSTERCLVAPNQVRYQAAQSHPALPSLPLAVAAHASHVSAAEPRRQQLPPLCYPPRGDGNNLASSGHEQV GVYES SNKASPS G XXXXXXXXXXR G+FHSV S ANT+PRV +GQQQPQLAWSYRLQHQQNGGAAQVVSPPRGG DGDVG M G+LEQALSHGAMSGLRVLSHSA SISQTDKEQQEN N
Sbjct: 28 VLAFEGLLPSYYNHKKFLSFVRQLNFYGFKKVKGDPASRMSSASSVHPPPSAVAADESDSWQEFRHPEFRRGRRDLLAGIKRQKDGGRVKRKQAELEKLGTLSTLTTDVDMMSVDLRAANGKLDDIMLMLSGMAGGNLHSSMIPPVQRGNMGRGGDGSFGFGIGGSSSDQNSYNTAETAGAAAAAFGGDRQQVVGAGSRDGSTDQEGHDPSVYGAPLDQRHTPCLPVGHQQQGWQGHGPYPQPHQPSFSTERCLVAPNQVRYQAAQSHPALPSLPLAVAAHASHVSAAEPRRQQLPPLCYPPRGDGNNLASSGHEQVGGVYESLSNKASPSGSGXXXXXXXXXXXXRRGDFHSVSSWANTNPRVIQGQQQPQLAWSYRLQHQQNGGAAQVVSPPRGGYDGDVGTM-GRLEQALSHGAMSGLRVLSHSAASISQTDKEQQENFN 469
BLAST of mRNA_Ecto-sp13_S_contig13326.2663.1 vs. uniprot
Match: A0A6H5LDD9_9PHAE (HSF_DOMAIN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LDD9_9PHAE) HSP 1 Score: 186 bits (471), Expect = 1.220e-49 Identity = 183/517 (35.40%), Postives = 224/517 (43.33%), Query Frame = 1
Query: 7 LFRQVLAFEGLLPSYYNHKKFLSFVRQLNFYGFKKVKGDPASRMSSASSVHPPPSAAA---VDESDSWQEFRHPEFRRGRRDLLAGIKRQKDGGRVKRKQAELEKLDTLSNLTTDVDMMSVDLRAANGKLDDIMSMLSSMAGGN--------LHSSMIPPVQRGN-------MGKIGDGSFGFGIGGSSSDQNSYDTAKTTSAAAAAFGGDRQQ---------VAGAGSWDGSTNQEDHDPSVHGGPLDQCHTPYLPVGHQQQG-------------------------------WQGHGPYPQPHQPSFSTERCLVAPNQVRYQAAQS------HPALPSLPLAVAAHASHVSAAEP----RRQQLPPLCYPPRGDGNNLASSGHEQVSGVYESPSNKASPSEIGSGXXXXXXXXXXRGNFHSVPSLANTSPRVARGQQQPQLAWSYRLQHQQNGGAAQV-VSPPRGGCDGDVGAMVGQLEQALSHGAMSGLRVLSHSAVSISQTDKEQQENVNTS 1350
L VL FEGLLPSYYNHKKFLSFVRQLNFYGFKKVKG ++R ++++ + A ESDSW+EFRHP+FRRGRRDLL GIKRQKDGGR+KRK+A+ +K D L+ L DVD +S DLR ANGKLD I+SML GN +HS+++ +Q G SS+ S+ T A V G G+ DP ++G P+ P Q WQGH Y QP Q E+ VAPNQ+RYQ AQ + A H S P RQQLPP S+K P GSG XXXXX PR + Q+Q QL+W Y N +A V+ G G GA LS G MSGL+VLS SAVS +TD+ + N +S
Sbjct: 5 LLTSVLVFEGLLPSYYNHKKFLSFVRQLNFYGFKKVKGGASTRSRTSAADSQGEAGAGSTGARESDSWEEFRHPQFRRGRRDLLVGIKRQKDGGRLKRKRADSQKSDILTTLRADVDTLSEDLREANGKLDTIISMLMGATSGNHPQQGGGPVHSNLLMHLQNGGNPXXXXXXXXXXXXXXXXXXXXXSSNPASFLPVTTPGTATHGXXXXXXXXXXXXXXXXVRG-----GNMGPVGQDPYMYGAPISNYMAPRFSTDQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWQGHQLYSQPCQQPPLAEQYPVAPNQIRYQMAQQPXXXXXXXXXXXXXXTIPAAGVHTSDVTPPTGSSRQQLPPR----------------------VSKNSSKIRPPNRGSGSGGVGXXXXXX-XXXXXXXXGTAVPRDLQ-QEQQQLSWVYPQSPMANASSASTAVNTLSGRAGGGGGA-------ELSRGPMSGLQVLSQSAVSAVETDRGRHSNTQSS 485
BLAST of mRNA_Ecto-sp13_S_contig13326.2663.1 vs. uniprot
Match: D7G1S0_ECTSI (HSF_DOMAIN domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1S0_ECTSI) HSP 1 Score: 175 bits (443), Expect = 1.620e-47 Identity = 137/327 (41.90%), Postives = 166/327 (50.76%), Query Frame = 1
Query: 16 QVLAFEGLLPSYYNHKKFLSFVRQLNFYGFKKVKGDPASRMSSASSVHPPPSAAAVDESDSWQEFRHPEFRRGRRDLLAGIKRQKDGGRVKRKQAELEKLDTLSNLTTDVDMMSVDLRAANGKLDDIMSMLSSMAGGNLHSSMIPPVQRGNMGKIGDGSFGFGIGGSSSDQNSYDTAKTTSAAAAAFGGDRQQVAGAGSWDGSTNQEDHDPSVHGGPLDQCHTPYLPVGHQQ-QGWQGH-------GPYPQPHQPSFSTERCLVAPNQVRYQAAQSHPALPSLPLAVAAHASHVSAAEPRRQQLPPL--CYPPRGDGNNLASSGHEQ 966
+VLAFEGLLPSYYNHK FLSFVRQLNFYGFKKVKG A+ + SDSW+EF HP+FR+GRRDLL IKRQKDGG +KRKQ +L K D L+ L +V M VDL ANGKLDD++S+LS + G + VQ+ + DG G SD++S + GG + AG G G T Q H LD P Q+ Q WQGH P P P + E NQ+R+ Q+ LP L AV A AS V+ P LPP+ R N+L S HEQ
Sbjct: 12 KVLAFEGLLPSYYNHKNFLSFVRQLNFYGFKKVKGG----------------ASRSESSDSWEEFMHPQFRQGRRDLLVSIKRQKDGGHLKRKQDDLRKSDILNTLAVEVGSMRVDLEMANGKLDDVLSLLSGITGTKQPGEL--SVQQHQSMRGDDGRGG-------SDRSS-----------SVHGGFGRWGAGVGGG-GDTGQRCLGAYAHSEQLDGSSAPRFHTDQQRRQEWQGHVAFPHSRWPCPAEQYPEENNEH-----NQMRHHVGQAQQTLPPL-AAVTARASEVALTVPSYHLLPPMYRSRSRRDSDNSLGPSEHEQ 295
BLAST of mRNA_Ecto-sp13_S_contig13326.2663.1 vs. uniprot
Match: D7G1S2_ECTSI (Heat Shock transcription factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1S2_ECTSI) HSP 1 Score: 134 bits (336), Expect = 6.450e-34 Identity = 71/102 (69.61%), Postives = 81/102 (79.41%), Query Frame = 1
Query: 1 SSLFRQVLAFEGLLPSYYNHKKFLSFVRQLNFYGFKKVKGDPASRMSSASSVHPPPSAAA---VDESDSWQEFRHPEFRRGRRDLLAGIKRQKDGGRVKRKQ 297
SS QVL FEGLLPSYYNHKKFLSFVRQLNFYGFKKVKG ++R S+++ + A ESDSW+EFRHP+FRRGRRDLL GIKRQKDGGR+KRK+
Sbjct: 34 SSKHWQVLVFEGLLPSYYNHKKFLSFVRQLNFYGFKKVKGGASTRSRSSAADSQGEAGAGSTGARESDSWEEFRHPQFRRGRRDLLVGIKRQKDGGRLKRKR 135
BLAST of mRNA_Ecto-sp13_S_contig13326.2663.1 vs. uniprot
Match: D7G9I4_ECTSI (N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9I4_ECTSI) HSP 1 Score: 134 bits (337), Expect = 1.420e-33 Identity = 68/99 (68.69%), Postives = 80/99 (80.81%), Query Frame = 1
Query: 1 SSLFRQVLAFEGLLPSYYNHKKFLSFVRQLNFYGFKKVKGDPASRMSSASSVHPPPSAAAVDESDSWQEFRHPEFRRGRRDLLAGIKRQKDGGRVKRKQ 297
S + ++VLAFEGLLPSYYNHKKFLSFVRQLNFYGFKKV+G AS +S+ AA +ES SW+EF+HP+FRRGRRDLL GIKRQKD GR+KR+Q
Sbjct: 46 SFIVKKVLAFEGLLPSYYNHKKFLSFVRQLNFYGFKKVRGRGASSRASSXXXXXXXXAAEAEESASWEEFKHPQFRRGRRDLLVGIKRQKDDGRMKRRQ 144
BLAST of mRNA_Ecto-sp13_S_contig13326.2663.1 vs. uniprot
Match: A0A5D6XXE4_9STRA (HSF_DOMAIN domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XXE4_9STRA) HSP 1 Score: 72.8 bits (177), Expect = 6.500e-10 Identity = 45/96 (46.88%), Postives = 60/96 (62.50%), Query Frame = 1
Query: 31 EGLLPSYYNHKKFLSFVRQLNFYGFKKVKGDPASRMSSASSVHPPPSAAAVDESDSWQEFRHPEFRRGRRDLLAGIKRQKDG-GRVKRKQAELEKL 315
E ++P Y+ HK F SFVRQLNFYGF+KV+ D + AA+VD + W EFRH +F RGRRDLL IKR+ GR ++AE+++L
Sbjct: 227 EHVIPVYFKHKNFSSFVRQLNFYGFRKVRVDAET-------------AASVDPKE-WWEFRHDKFVRGRRDLLREIKRRTIADGRSTIERAEMDEL 308
BLAST of mRNA_Ecto-sp13_S_contig13326.2663.1 vs. uniprot
Match: A0A7S2HSW5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HSW5_9STRA) HSP 1 Score: 68.6 bits (166), Expect = 6.600e-10 Identity = 40/88 (45.45%), Postives = 48/88 (54.55%), Query Frame = 1
Query: 1 SSLFRQVLAFEGLLPSYYNHKKFLSFVRQLNFYGFKKVKGDPASRMSSASSVHPPPSAAAVDESDSWQEFRHPEFRRGRRDLLAGIKR 264
S L + AF LLP +Y HK F SFVRQLNFYGF+K++ D AS S+ W FRH +FRRG+ LL IKR
Sbjct: 23 SFLVKDTNAFSELLPRFYKHKNFTSFVRQLNFYGFRKLRADDASSFSNP----------------QWWGFRHEKFRRGQYHLLRLIKR 94
BLAST of mRNA_Ecto-sp13_S_contig13326.2663.1 vs. uniprot
Match: K3XA08_GLOUD (HSF_DOMAIN domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3XA08_GLOUD) HSP 1 Score: 72.4 bits (176), Expect = 7.680e-10 Identity = 48/109 (44.04%), Postives = 67/109 (61.47%), Query Frame = 1
Query: 1 SSLFRQVLAF-EGLLPSYYNHKKFLSFVRQLNFYGFKKVKGDPASRMSSASSVHPPPSAAAVDESDSWQEFRHPEFRRGRRDLLAGIKRQKDG-GRVKRKQAELEKLDT 321
S + ++ +AF E ++P Y+ HK F SFVRQLNFYGF+KV+ D + AA VD + W EFRH +F RGR+DLL IKR+ GR ++AE+++L T
Sbjct: 167 SFIVKKPIAFAEHVIPVYFKHKNFSSFVRQLNFYGFRKVRVDAET-------------AANVDPKE-WWEFRHDKFVRGRKDLLREIKRRTIADGRSTIERAEMDELRT 261
BLAST of mRNA_Ecto-sp13_S_contig13326.2663.1 vs. uniprot
Match: A0A8K1CMF4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CMF4_PYTOL) HSP 1 Score: 71.6 bits (174), Expect = 1.320e-9 Identity = 39/78 (50.00%), Postives = 48/78 (61.54%), Query Frame = 1
Query: 31 EGLLPSYYNHKKFLSFVRQLNFYGFKKVKGDPASRMSSASSVHPPPSAAAVDESDSWQEFRHPEFRRGRRDLLAGIKR 264
E ++PSY+ HK F SFVRQLNFYGF+KV+ V P VD D W EFRH +F+RGR++LL IKR
Sbjct: 189 ENVIPSYFKHKNFSSFVRQLNFYGFRKVR------------VVDPEVTGGVDPKD-WWEFRHEKFQRGRKELLKEIKR 253
BLAST of mRNA_Ecto-sp13_S_contig13326.2663.1 vs. uniprot
Match: W2PP33_PHYPN (HSF_DOMAIN domain-containing protein n=11 Tax=Phytophthora TaxID=4783 RepID=W2PP33_PHYPN) HSP 1 Score: 70.5 bits (171), Expect = 2.680e-9 Identity = 41/89 (46.07%), Postives = 52/89 (58.43%), Query Frame = 1
Query: 1 SSLFRQVLAF-EGLLPSYYNHKKFLSFVRQLNFYGFKKVKGDPASRMSSASSVHPPPSAAAVDESDSWQEFRHPEFRRGRRDLLAGIKR 264
S + +Q AF E ++P+Y+ H+KF SFVRQLN YGF+KV+ AS + A P W EFRH F RGRRDLL I+R
Sbjct: 79 SFVVKQPAAFAEHVIPTYFKHRKFSSFVRQLNLYGFRKVRATSASTVEDAEEEDASPK--------DWWEFRHERFVRGRRDLLCEIRR 159 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13326.2663.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig13326.2663.1 >prot_Ecto-sp13_S_contig13326.2663.1 ID=prot_Ecto-sp13_S_contig13326.2663.1|Name=mRNA_Ecto-sp13_S_contig13326.2663.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=465bp SSLFRQVLAFEGLLPSYYNHKKFLSFVRQLNFYGFKKVKGDPASRMSSASback to top mRNA from alignment at Ecto-sp13_S_contig13326:412..3494- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig13326.2663.1 ID=mRNA_Ecto-sp13_S_contig13326.2663.1|Name=mRNA_Ecto-sp13_S_contig13326.2663.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3083bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13326:412..3494- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig13326:412..3494- >mRNA_Ecto-sp13_S_contig13326.2663.1 ID=mRNA_Ecto-sp13_S_contig13326.2663.1|Name=mRNA_Ecto-sp13_S_contig13326.2663.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1395bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13326:412..3494- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |