prot_Ecto-sp13_S_contig13301.2649.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13301.2649.1
Unique Nameprot_Ecto-sp13_S_contig13301.2649.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length127
Homology
BLAST of mRNA_Ecto-sp13_S_contig13301.2649.1 vs. uniprot
Match: D7FXG1_ECTSI (ATP synthase subunit beta n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXG1_ECTSI)

HSP 1 Score: 249 bits (635), Expect = 1.620e-78
Identity = 126/127 (99.21%), Postives = 127/127 (100.00%), Query Frame = 0
Query:    1 VLSRQIAELGIYPAVDPLDSTSRMLDPRVIGDEHYETARATQKLLQDYKGLQDIIAILGMDELSEDDKLTVARARKVQRFMSQPFTVAEVFTGTKGVFVSLEDTIKGFQEILSGAHDDLPEGAFYMV 127
            VLSRQIAELGIYPAVDPLDSTSRMLDPRVIGDEHYETARATQKLLQDYKGLQ+IIAILGMDELSEDDKLTVARARKVQRFMSQPFTVAEVFTGTKGVFVSLEDTIKGFQEILSGAHDDLPEGAFYMV
Sbjct:  364 VLSRQIAELGIYPAVDPLDSTSRMLDPRVIGDEHYETARATQKLLQDYKGLQEIIAILGMDELSEDDKLTVARARKVQRFMSQPFTVAEVFTGTKGVFVSLEDTIKGFQEILSGAHDDLPEGAFYMV 490          
BLAST of mRNA_Ecto-sp13_S_contig13301.2649.1 vs. uniprot
Match: A0A836CJ45_9STRA (ATP synthase subunit beta n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ45_9STRA)

HSP 1 Score: 237 bits (604), Expect = 6.720e-74
Identity = 119/127 (93.70%), Postives = 122/127 (96.06%), Query Frame = 0
Query:    1 VLSRQIAELGIYPAVDPLDSTSRMLDPRVIGDEHYETARATQKLLQDYKGLQDIIAILGMDELSEDDKLTVARARKVQRFMSQPFTVAEVFTGTKGVFVSLEDTIKGFQEILSGAHDDLPEGAFYMV 127
            VLSRQIAELGIYPAVDPLDSTSRMLDPR+IGDEHY+ ARATQKLLQDYK LQDIIAILGMDELSEDDKLTVARARKVQRFMSQPFTVAEVFTGTKGVFV LEDTI GF+EILSGAHDDLPE AFYMV
Sbjct:  363 VLSRQIAELGIYPAVDPLDSTSRMLDPRIIGDEHYKVARATQKLLQDYKSLQDIIAILGMDELSEDDKLTVARARKVQRFMSQPFTVAEVFTGTKGVFVKLEDTISGFKEILSGAHDDLPEAAFYMV 489          
BLAST of mRNA_Ecto-sp13_S_contig13301.2649.1 vs. uniprot
Match: A0A7S3HHB8_9STRA (H(+)-transporting two-sector ATPase n=2 Tax=Eukaryota TaxID=2759 RepID=A0A7S3HHB8_9STRA)

HSP 1 Score: 219 bits (558), Expect = 3.840e-71
Identity = 113/126 (89.68%), Postives = 115/126 (91.27%), Query Frame = 0
Query:    1 VLSRQIAELGIYPAVDPLDSTSRMLDPRVIGDEHYETARATQKLLQDYKGLQDIIAILGMDELSEDDKLTVARARKVQRFMSQPFTVAEVFTGTKGVFVSLEDTIKGFQEILSGAHDDLPEGAFYM 126
            VLSRQIAELGIYPAVDPLDSTSRMLDPRVIG+ HY+TARATQKLLQDYKGLQDIIAILGMDELSEDDKLTVARARK QRFMSQPF VAEVFTG  G FV LEDTIKGFQEILSG  D LPE AFYM
Sbjct:   31 VLSRQIAELGIYPAVDPLDSTSRMLDPRVIGEVHYQTARATQKLLQDYKGLQDIIAILGMDELSEDDKLTVARARKAQRFMSQPFHVAEVFTGRGGRFVQLEDTIKGFQEILSGKLDSLPESAFYM 156          
BLAST of mRNA_Ecto-sp13_S_contig13301.2649.1 vs. uniprot
Match: A0A7S2SJ94_9STRA (ATP synthase subunit beta n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SJ94_9STRA)

HSP 1 Score: 228 bits (582), Expect = 1.430e-70
Identity = 115/126 (91.27%), Postives = 118/126 (93.65%), Query Frame = 0
Query:    1 VLSRQIAELGIYPAVDPLDSTSRMLDPRVIGDEHYETARATQKLLQDYKGLQDIIAILGMDELSEDDKLTVARARKVQRFMSQPFTVAEVFTGTKGVFVSLEDTIKGFQEILSGAHDDLPEGAFYM 126
            VLSR IA LGIYPAVDPLDSTSRMLDPRV+GD HYE ARATQKLLQDYKGLQDIIAILGMDELSEDDKLTVARARKVQRFMSQPFTVAEVFTGTKG FVSLEDTIKGF EIL+G HDD+PE AFYM
Sbjct:  369 VLSRNIASLGIYPAVDPLDSTSRMLDPRVLGDTHYEMARATQKLLQDYKGLQDIIAILGMDELSEDDKLTVARARKVQRFMSQPFTVAEVFTGTKGKFVSLEDTIKGFGEILAGEHDDIPEAAFYM 494          
BLAST of mRNA_Ecto-sp13_S_contig13301.2649.1 vs. uniprot
Match: A0A7S2GC43_9STRA (ATP synthase subunit beta n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2GC43_9STRA)

HSP 1 Score: 228 bits (580), Expect = 2.710e-70
Identity = 113/126 (89.68%), Postives = 120/126 (95.24%), Query Frame = 0
Query:    1 VLSRQIAELGIYPAVDPLDSTSRMLDPRVIGDEHYETARATQKLLQDYKGLQDIIAILGMDELSEDDKLTVARARKVQRFMSQPFTVAEVFTGTKGVFVSLEDTIKGFQEILSGAHDDLPEGAFYM 126
            VLSR IA+LGIYPAVDPLDSTSRMLDP+VIG EHY+ ARATQKLLQDYKGLQDIIAILGMDELSEDDKLTVARARKVQ+FMSQPFTVAEVFTGTKG FVSL D+IKGF EI+SGAHDD+PEGAFYM
Sbjct:  369 VLSRNIAQLGIYPAVDPLDSTSRMLDPKVIGSEHYDLARATQKLLQDYKGLQDIIAILGMDELSEDDKLTVARARKVQKFMSQPFTVAEVFTGTKGEFVSLADSIKGFSEIISGAHDDVPEGAFYM 494          
BLAST of mRNA_Ecto-sp13_S_contig13301.2649.1 vs. uniprot
Match: A0A7S2EIC6_TRICV (ATP synthase subunit beta n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EIC6_TRICV)

HSP 1 Score: 224 bits (572), Expect = 3.510e-69
Identity = 113/127 (88.98%), Postives = 119/127 (93.70%), Query Frame = 0
Query:    1 VLSRQIAELGIYPAVDPLDSTSRMLDPRVIGDEHYETARATQKLLQDYKGLQDIIAILGMDELSEDDKLTVARARKVQRFMSQPFTVAEVFTGTKGVFVSLEDTIKGFQEILSGAHDDLPEGAFYMV 127
            VLSR IAELGIYPAVDPLDSTSRML PRVIGDEHYE ARATQKLLQDYKGLQDIIAILGMDELSEDDKLTVARARKVQ+FMSQPF VAEVFTGT G FVSLE TI+GF++I++G HDDLPEGAFYMV
Sbjct:  359 VLSRAIAELGIYPAVDPLDSTSRMLTPRVIGDEHYEVARATQKLLQDYKGLQDIIAILGMDELSEDDKLTVARARKVQKFMSQPFHVAEVFTGTAGKFVSLEQTIQGFKQIINGEHDDLPEGAFYMV 485          
BLAST of mRNA_Ecto-sp13_S_contig13301.2649.1 vs. uniprot
Match: A0A1Z5JNL5_FISSO (ATP synthase subunit beta n=2 Tax=Bacillariophycidae TaxID=33850 RepID=A0A1Z5JNL5_FISSO)

HSP 1 Score: 223 bits (569), Expect = 9.850e-69
Identity = 113/127 (88.98%), Postives = 117/127 (92.13%), Query Frame = 0
Query:    1 VLSRQIAELGIYPAVDPLDSTSRMLDPRVIGDEHYETARATQKLLQDYKGLQDIIAILGMDELSEDDKLTVARARKVQRFMSQPFTVAEVFTGTKGVFVSLEDTIKGFQEILSGAHDDLPEGAFYMV 127
            VLSR IAELGIYPAVDPLDSTSRMLDPRVIG  HY+ ARATQKLLQDYKGLQDIIAILGMDELSEDDKLTVARARKVQ+FMSQPF VAEVFTGT G FVSLEDTI GF EI+SGA+D LPEGAFYMV
Sbjct:  359 VLSRSIAELGIYPAVDPLDSTSRMLDPRVIGQRHYDVARATQKLLQDYKGLQDIIAILGMDELSEDDKLTVARARKVQKFMSQPFHVAEVFTGTAGKFVSLEDTINGFSEIISGAYDSLPEGAFYMV 485          
BLAST of mRNA_Ecto-sp13_S_contig13301.2649.1 vs. uniprot
Match: A0A3D1GVQ4_9PROT (F0F1 ATP synthase subunit beta (Fragment) n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3D1GVQ4_9PROT)

HSP 1 Score: 209 bits (532), Expect = 3.610e-67
Identity = 104/127 (81.89%), Postives = 114/127 (89.76%), Query Frame = 0
Query:    1 VLSRQIAELGIYPAVDPLDSTSRMLDPRVIGDEHYETARATQKLLQDYKGLQDIIAILGMDELSEDDKLTVARARKVQRFMSQPFTVAEVFTGTKGVFVSLEDTIKGFQEILSGAHDDLPEGAFYMV 127
            VLSRQIAELGIYPAVDPLDSTSR+LDPRV+GDEHY TAR  Q++LQ YK LQDIIAILGMDELSE+DKL VARARK+QRF+SQPF VAEVFTGT GVFVSLE+ IKGFQ I+ G +DDLPE AFYMV
Sbjct:   31 VLSRQIAELGIYPAVDPLDSTSRVLDPRVVGDEHYNTAREVQEVLQQYKSLQDIIAILGMDELSEEDKLVVARARKIQRFLSQPFHVAEVFTGTPGVFVSLEENIKGFQGIVRGDYDDLPEAAFYMV 157          
BLAST of mRNA_Ecto-sp13_S_contig13301.2649.1 vs. uniprot
Match: A0A7R9UFC7_9STRA (ATP synthase subunit beta n=3 Tax=Pinguiochrysidaceae TaxID=1004268 RepID=A0A7R9UFC7_9STRA)

HSP 1 Score: 220 bits (561), Expect = 4.670e-67
Identity = 109/127 (85.83%), Postives = 119/127 (93.70%), Query Frame = 0
Query:    1 VLSRQIAELGIYPAVDPLDSTSRMLDPRVIGDEHYETARATQKLLQDYKGLQDIIAILGMDELSEDDKLTVARARKVQRFMSQPFTVAEVFTGTKGVFVSLEDTIKGFQEILSGAHDDLPEGAFYMV 127
            VLSR IAELGIYPAVDPLDSTSRMLDPR++G+EHYE ARA QKLLQDYK LQDIIAILGMDELSEDDKLTVARARKV+RF+SQPF VAEVFTGT G FV+L+D+IK F+EILSGAHD+LPEGAFYMV
Sbjct:  407 VLSRSIAELGIYPAVDPLDSTSRMLDPRIVGEEHYELARAIQKLLQDYKSLQDIIAILGMDELSEDDKLTVARARKVERFLSQPFHVAEVFTGTPGKFVALDDSIKAFKEILSGAHDELPEGAFYMV 533          
BLAST of mRNA_Ecto-sp13_S_contig13301.2649.1 vs. uniprot
Match: A0A7S0AY30_9DINO (H(+)-transporting two-sector ATPase n=2 Tax=Dinophyceae TaxID=2864 RepID=A0A7S0AY30_9DINO)

HSP 1 Score: 208 bits (529), Expect = 7.960e-67
Identity = 101/127 (79.53%), Postives = 114/127 (89.76%), Query Frame = 0
Query:    1 VLSRQIAELGIYPAVDPLDSTSRMLDPRVIGDEHYETARATQKLLQDYKGLQDIIAILGMDELSEDDKLTVARARKVQRFMSQPFTVAEVFTGTKGVFVSLEDTIKGFQEILSGAHDDLPEGAFYMV 127
            VLSRQIAELGIYPAVDPLDSTSRMLDP ++G  HY+ AR+TQK+LQDYK LQDIIAILGMDELSE+DKLTVARARKVQRF+SQPF VAE+FTGT G FV LE TI+ F+E+LSGA DD+PE AFYM+
Sbjct:   21 VLSRQIAELGIYPAVDPLDSTSRMLDPSIVGQRHYDIARSTQKILQDYKSLQDIIAILGMDELSEEDKLTVARARKVQRFLSQPFFVAEIFTGTPGAFVDLETTIQDFEEVLSGACDDIPEAAFYMI 147          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13301.2649.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FXG1_ECTSI1.620e-7899.21ATP synthase subunit beta n=2 Tax=Ectocarpus TaxID... [more]
A0A836CJ45_9STRA6.720e-7493.70ATP synthase subunit beta n=1 Tax=Tribonema minus ... [more]
A0A7S3HHB8_9STRA3.840e-7189.68H(+)-transporting two-sector ATPase n=2 Tax=Eukary... [more]
A0A7S2SJ94_9STRA1.430e-7091.27ATP synthase subunit beta n=1 Tax=Rhizochromulina ... [more]
A0A7S2GC43_9STRA2.710e-7089.68ATP synthase subunit beta n=1 Tax=Florenciella par... [more]
A0A7S2EIC6_TRICV3.510e-6988.98ATP synthase subunit beta n=1 Tax=Trieres chinensi... [more]
A0A1Z5JNL5_FISSO9.850e-6988.98ATP synthase subunit beta n=2 Tax=Bacillariophycid... [more]
A0A3D1GVQ4_9PROT3.610e-6781.89F0F1 ATP synthase subunit beta (Fragment) n=1 Tax=... [more]
A0A7R9UFC7_9STRA4.670e-6785.83ATP synthase subunit beta n=3 Tax=Pinguiochrysidac... [more]
A0A7S0AY30_9DINO7.960e-6779.53H(+)-transporting two-sector ATPase n=2 Tax=Dinoph... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024034ATPase, F1/V1 complex, beta/alpha subunit, C-terminalGENE3D1.10.1140.10coord: 25..127
e-value: 1.2E-51
score: 175.3
NoneNo IPR availablePANTHERPTHR15184:SF56coord: 1..127
NoneNo IPR availablePANTHERPTHR15184ATP SYNTHASEcoord: 1..127
NoneNo IPR availableSUPERFAMILY47917C-terminal domain of alpha and beta subunits of F1 ATP synthasecoord: 25..127
IPR020003ATPase, alpha/beta subunit, nucleotide-binding domain, active sitePROSITEPS00152ATPASE_ALPHA_BETAcoord: 13..22

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13301contigEcto-sp13_S_contig13301:3371..4557 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13301.2649.1mRNA_Ecto-sp13_S_contig13301.2649.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13301 3371..4557 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13301.2649.1 ID=prot_Ecto-sp13_S_contig13301.2649.1|Name=mRNA_Ecto-sp13_S_contig13301.2649.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=127bp
VLSRQIAELGIYPAVDPLDSTSRMLDPRVIGDEHYETARATQKLLQDYKG
LQDIIAILGMDELSEDDKLTVARARKVQRFMSQPFTVAEVFTGTKGVFVS
LEDTIKGFQEILSGAHDDLPEGAFYMV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR024034ATPase_F1/V1_b/a_C
IPR020003ATPase_a/bsu_AS