prot_Ecto-sp13_S_contig133.2646.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig133.2646.1
Unique Nameprot_Ecto-sp13_S_contig133.2646.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length232
Homology
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BLAST of mRNA_Ecto-sp13_S_contig133.2646.1 vs. uniprot
Match: A0A6H5K2E6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2E6_9PHAE)

HSP 1 Score: 131 bits (329), Expect = 1.130e-35
Identity = 74/97 (76.29%), Postives = 78/97 (80.41%), Query Frame = 0 
Query:   13 MLEMLLILILGLSVVLDASAVNECLDATDADRCQ----ANTALGLRSCGITDADFDDLASCLEAAGPETITYLSLASNELTTLPEGIFGGLTALETL 105
            MLEM LI++LGLS +LD  AVN CLD+TDADRCQ     N  LGL  CG TDADFDDLASCLEAAGPETIT L L  NELTTLPEGIFGGLTALETL
Sbjct:    1 MLEMTLIILLGLSTLLDTFAVNVCLDSTDADRCQIDAHGNLILGL--CGTTDADFDDLASCLEAAGPETITTLYLYRNELTTLPEGIFGGLTALETL 95
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BLAST of mRNA_Ecto-sp13_S_contig133.2646.1 vs. uniprot
Match: A0A6H5JSZ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSZ2_9PHAE)

HSP 1 Score: 134 bits (336), Expect = 2.700e-35
Identity = 73/93 (78.49%), Postives = 78/93 (83.87%), Query Frame = 0 
Query:   13 MLEMLLILILGLSVVLDASAVNECLDATDADRCQ--ANTALGLRSCGITDADFDDLASCLEAAGPETITYLSLASNELTTLPEGIFGGLTALE 103
            MLEM LI++LGLS  LD SAVN CLD+TDADRCQ  AN  L L  CGITDADFDDLASCLEAAGPETIT L L+ NELTTLPEGIFGGLTAL+
Sbjct:    1 MLEMTLIILLGLSTFLDTSAVNVCLDSTDADRCQIDANGNLSLGLCGITDADFDDLASCLEAAGPETITTLYLSHNELTTLPEGIFGGLTALQ 93
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BLAST of mRNA_Ecto-sp13_S_contig133.2646.1 vs. uniprot
Match: A0A6H5KAY3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAY3_9PHAE)

HSP 1 Score: 132 bits (331), Expect = 2.370e-34
Identity = 72/98 (73.47%), Postives = 79/98 (80.61%), Query Frame = 0 
Query:    8 TRRRRMLEMLLILILGLSVVLDASAVNECLDATDADRCQ--ANTALGLRSCGITDADFDDLASCLEAAGPETITYLSLASNELTTLPEGIFGGLTALE 103
            T  RR+LEM  I++L L  +LD SAVN CLD TDADRC+  A+  L L SCGITDADFDDLASCLE AGPE ITYLSL+ NELTTLPEGIFGGLTALE
Sbjct:  112 TTMRRLLEMTSIILLVLFTLLDISAVNVCLDTTDADRCEIDADGQLDLYSCGITDADFDDLASCLEDAGPEAITYLSLSQNELTTLPEGIFGGLTALE 209
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BLAST of mRNA_Ecto-sp13_S_contig133.2646.1 vs. uniprot
Match: A0A6H5KI88_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI88_9PHAE)

HSP 1 Score: 119 bits (299), Expect = 2.740e-31
Identity = 66/95 (69.47%), Postives = 71/95 (74.74%), Query Frame = 0 
Query:   13 MLEMLLILILGLSVVLDASAVNECLDATDADRCQ--ANTALGLRSCGITDADFDDLASCLEAAGPETITYLSLASNELTTLPEGIFGGLTALETL 105
            MLEM  I++LGLS +L+ SAVN CLD TDA  CQ  A   L L  CGITDADFDDLASCLEAAGPE IT L L  NELTTLPEGIFG LT L+ L
Sbjct:    1 MLEMTSIILLGLSTLLNTSAVNVCLDTTDAGNCQIEAGETLDLSDCGITDADFDDLASCLEAAGPEAITTLFLYENELTTLPEGIFGSLTGLQML 95
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BLAST of mRNA_Ecto-sp13_S_contig133.2646.1 vs. uniprot
Match: A0A6H5KAC1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAC1_9PHAE)

HSP 1 Score: 111 bits (278), Expect = 3.670e-28
Identity = 59/77 (76.62%), Postives = 63/77 (81.82%), Query Frame = 0 
Query:   31 SAVNECLDATDADRCQ--ANTALGLRSCGITDADFDDLASCLEAAGPETITYLSLASNELTTLPEGIFGGLTALETL 105
            + V+ CLD+TDADRCQ  AN  L L  CGI D DFDDLASCLEAAGPETIT L L+ NELTTLPEGIFGGLTALETL
Sbjct:    8 NTVSICLDSTDADRCQIDANGNLSLGLCGIADTDFDDLASCLEAAGPETITTLYLSVNELTTLPEGIFGGLTALETL 84
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BLAST of mRNA_Ecto-sp13_S_contig133.2646.1 vs. uniprot
Match: D7G7X7_ECTSI (ATP binding / amino acid binding / protein kinase/ protein serine/threonine kinase/ protein-tyrosine n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7X7_ECTSI)

HSP 1 Score: 83.6 bits (205), Expect = 8.270e-15
Identity = 47/99 (47.47%), Postives = 67/99 (67.68%), Query Frame = 0 
Query:   12 RMLEMLLILILGLSVVLDASAVNECLDATDAD-RCQ--ANTALGLRSCGITDADFD--DLASCLEAAGPETITYLSLASNELTTLPEGIFGGLTALETL 105
            R +++LL +++GL+ +L  S  N CLD TD D RC+  A   L L  C + D D D  DLA+CL+AAG E++ +L L  N+LTTLP+G+F  LT++ETL
Sbjct:   40 RSMKVLLAVLVGLTALLSTSEANSCLDPTDTDYRCEIDAEGTLDLSECLVADDDVDSGDLAACLDAAGRESVIFLDLGRNDLTTLPDGVFLDLTSMETL 138
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BLAST of mRNA_Ecto-sp13_S_contig133.2646.1 vs. uniprot
Match: A0A6H5KF25_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF25_9PHAE)

HSP 1 Score: 83.6 bits (205), Expect = 8.320e-15
Identity = 50/102 (49.02%), Postives = 67/102 (65.69%), Query Frame = 0 
Query:    9 RRRRMLEMLLILILGLSVVLDASAVNECLDATDAD-RCQ--ANTALGLRSCGITDADFD--DLASCLEAAGPETITYLSLASNELTTLPEGIFGGLTALETL 105
            R  R +++LL ++LG + +L  S  N CLD TD D RC+  A   L L  C I D D D  DLA+CL+AAG E++ +L L  N+LTTLP+G+F  LTA+ETL
Sbjct:   29 RLPRSMKVLLAVLLGPTALLGTSKANSCLDPTDTDYRCEIDAEGTLDLSECLIADDDVDSGDLAACLDAAGRESVIFLDLGRNDLTTLPDGVFLDLTAMETL 130
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BLAST of mRNA_Ecto-sp13_S_contig133.2646.1 vs. uniprot
Match: D7FL57_ECTSI (Hypothetical leucine rich repeat kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL57_ECTSI)

HSP 1 Score: 62.0 bits (149), Expect = 1.780e-7
Identity = 33/53 (62.26%), Postives = 37/53 (69.81%), Query Frame = 0 
Query:   53 LRSCGITDADFD--DLASCLEAAGPETITYLSLASNELTTLPEGIFGGLTALE 103
            L  CGITD D D  DLASCL+ AG E +  L L+SN LTTLP GIF GLT L+
Sbjct:   83 LNDCGITDEDVDGGDLASCLDNAGRELVVELWLSSNALTTLPAGIFEGLTVLD 135
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig133.2646.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A6H5K2E6_9PHAE1.130e-3576.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JSZ2_9PHAE2.700e-3578.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KAY3_9PHAE2.370e-3473.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KI88_9PHAE2.740e-3169.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KAC1_9PHAE3.670e-2876.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G7X7_ECTSI8.270e-1547.47ATP binding / amino acid binding / protein kinase/... [more]
A0A6H5KF25_9PHAE8.320e-1549.02Protein kinase domain-containing protein n=1 Tax=E... [more]
D7FL57_ECTSI1.780e-762.26Hypothetical leucine rich repeat kinase n=1 Tax=Ec... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00364LRR_bac_2coord: 171..190
e-value: 16.0
score: 12.1
coord: 99..118
e-value: 11.0
score: 13.5
coord: 75..94
e-value: 3.4
score: 16.7
coord: 147..166
e-value: 99.0
score: 6.1
coord: 123..142
e-value: 19.0
score: 11.5
NoneNo IPR availablePANTHERPTHR24369:SF102LEUCINE-RICH REPEAT-CONTAINING PROTEIN 4Bcoord: 77..190
coord: 126..186
NoneNo IPR availablePANTHERPTHR24369FAMILY NOT NAMEDcoord: 77..190
coord: 126..186
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 29..32
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 33..231
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..32
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 17..28
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..32
score: 0.778
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 51..207
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 147..170
e-value: 0.0018
score: 27.5
coord: 99..122
e-value: 4.4E-6
score: 36.2
coord: 79..98
e-value: 13.0
score: 12.3
coord: 171..194
e-value: 0.086
score: 22.0
coord: 123..146
e-value: 2.4E-5
score: 33.8
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 28..213
e-value: 8.0E-40
score: 138.1
IPR001611Leucine-rich repeatPFAMPF00560LRR_1coord: 174..192
e-value: 0.41
score: 11.4
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 78..136
e-value: 8.5E-16
score: 57.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig133contigEcto-sp13_S_contig133:21328..35015 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig133.2646.1mRNA_Ecto-sp13_S_contig133.2646.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig133 21328..35015 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig133.2646.1 ID=prot_Ecto-sp13_S_contig133.2646.1|Name=mRNA_Ecto-sp13_S_contig133.2646.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=232bp
SSLLSASTRRRRMLEMLLILILGLSVVLDASAVNECLDATDADRCQANTA
LGLRSCGITDADFDDLASCLEAAGPETITYLSLASNELTTLPEGIFGGLT
ALETLFLSDNELTTLPEGIFGGLPALELLYLYSNKLTTLPAGIFGGLTAL
EILYLYDNVLTVLPEGVFGDLTALEILHLEGNSLECLPSTTLLDSGGLLV
SPNPHSCQSILTPSGCPRPSPVSIMEFTRTG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003591Leu-rich_rpt_typical-subtyp
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt