prot_Ecto-sp13_S_contig13271.2631.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13271.2631.1
Unique Nameprot_Ecto-sp13_S_contig13271.2631.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length190
Homology
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BLAST of mRNA_Ecto-sp13_S_contig13271.2631.1 vs. uniprot
Match: D7G4W1_ECTSI (Lactamase_B domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4W1_ECTSI)

HSP 1 Score: 233 bits (595), Expect = 1.360e-71
Identity = 150/177 (84.75%), Postives = 150/177 (84.75%), Query Frame = 0 
Query:    1 MMRRHALAGGGGLLSLGMVWSQAMCAKASNGHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFGGRASSAGVDVGTKGIRRGSQQRRLCGGGDGEDGRGRAGRRDHSQLIFVGAGSSTAVPSAFLLLHPELDTKQTAIAQLSVATPPEVNKNYRGGVRCGVVLHVAW 177
            MMRRHALAGGGGLLSLGMVWSQAMCAKASNGH X  XXXXXXXXXXXXXXXXXXXX                FGGRASSAGVD GTKGIR GSQQRRLCGGGDGE G GRAGRRDHSQLIFVGAGSSTAVPSAFLLLHPELDTKQTAIAQLSVATPPEVNKNYRGG   GVVLHV W
Sbjct:    1 MMRRHALAGGGGLLSLGMVWSQAMCAKASNGHGXHSXXXXXXXXXXXXXXXXXXXXA--------------TFGGRASSAGVDAGTKGIRPGSQQRRLCGGGDGEGGGGRAGRRDHSQLIFVGAGSSTAVPSAFLLLHPELDTKQTAIAQLSVATPPEVNKNYRGGAEYGVVLHVPW 163
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BLAST of mRNA_Ecto-sp13_S_contig13271.2631.1 vs. uniprot
Match: A0A6H5JEM8_9PHAE (Lactamase_B domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEM8_9PHAE)

HSP 1 Score: 214 bits (544), Expect = 2.620e-65
Identity = 122/176 (69.32%), Postives = 125/176 (71.02%), Query Frame = 0 
Query:    1 MMRRHALAGGGGLLSLGMVWSQAMCAKASNGHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFGGRASSAGVDVGTKGIRRGSQQRRLCGGGDGEDGRGRAGRRDHSQLIFVGAGSSTAVPSAFLLLHPELDTKQTAIAQLSVATPPEVNKNYRGGVRCGVVLHVA 176
            MMRRHALAGGGGLLSLGMVWSQAMCAKASNGH                                       AFG RASSAGVD GTKGIRRGS QRRLCGGGD EDG  RAGRRDHSQLIFVGAGSSTAVPSAFLLLHPELDTKQTAIAQLSVATPPEVNKNYRG     V++ +A
Sbjct:    1 MMRRHALAGGGGLLSLGMVWSQAMCAKASNGHSHHSAFASAPPRPSGSSAVGVGAGA--------------AFGDRASSAGVDAGTKGIRRGSHQRRLCGGGDDEDGGARAGRRDHSQLIFVGAGSSTAVPSAFLLLHPELDTKQTAIAQLSVATPPEVNKNYRGNT--SVLVRIA 160
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13271.2631.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G4W1_ECTSI1.360e-7184.75Lactamase_B domain-containing protein n=1 Tax=Ecto... [more]
A0A6H5JEM8_9PHAE2.620e-6569.32Lactamase_B domain-containing protein n=1 Tax=Ecto... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..189
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..21
score: 0.615

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13271contigEcto-sp13_S_contig13271:1772..4173 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13271.2631.1mRNA_Ecto-sp13_S_contig13271.2631.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13271 1772..4773 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13271.2631.1 ID=prot_Ecto-sp13_S_contig13271.2631.1|Name=mRNA_Ecto-sp13_S_contig13271.2631.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=190bp
MMRRHALAGGGGLLSLGMVWSQAMCAKASNGHGHHAAFASAPPRPSGSSA
VGVGAGAGAGAGAGAGAGAGAAFGGRASSAGVDVGTKGIRRGSQQRRLCG
GGDGEDGRGRAGRRDHSQLIFVGAGSSTAVPSAFLLLHPELDTKQTAIAQ
LSVATPPEVNKNYRGGVRCGVVLHVAWVWDMYRYSQAQR*
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