prot_Ecto-sp13_S_contig13194.2590.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13194.2590.1
Unique Nameprot_Ecto-sp13_S_contig13194.2590.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length193
Homology
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BLAST of mRNA_Ecto-sp13_S_contig13194.2590.1 vs. uniprot
Match: D7G8B4_ECTSI (Pescadillo homolog n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8B4_ECTSI)

HSP 1 Score: 186 bits (471), Expect = 1.600e-51
Identity = 166/172 (96.51%), Postives = 167/172 (97.09%), Query Frame = 0 
Query:    1 GTEAAEAEAGDDVLDVVPGVATDISSSAPAAGTSSRSDDEAEEDGDGEEAFAKDLERERAGTAFSKAKALEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMSRNMMSKKAKRLYGRMQHGLSKRREEVERLKAKRKKLEAQYDAPDGMAAK 172
            GTE AE E  DDVLDVVPGVATD+SSSA AAGTSSRSDDEAEEDGDGEEAFAKDLERERAGTAFSKAKALEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMSRNMMSKKAKRLYGRMQHGLSKRREEVERLKAKRKKLEAQYDAPDGMAAK
Sbjct:  566 GTENAEGE--DDVLDVVPGVATDVSSSATAAGTSSRSDDEAEEDGDGEEAFAKDLERERAGTAFSKAKALEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMSRNMMSKKAKRLYGRMQHGLSKRREEVERLKAKRKKLEAQYDAPDGMAAK 735
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BLAST of mRNA_Ecto-sp13_S_contig13194.2590.1 vs. uniprot
Match: A0A835Z1N0_9STRA (Pescadillo homolog n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1N0_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 6.510e-9
Identity = 32/44 (72.73%), Postives = 40/44 (90.91%), Query Frame = 0 
Query:  121 EMSRNMMSKKAKRLYGRMQHGLSKRREEVERLKAKRKKLEAQYD 164
            E+S+ MMSKKAKRLYGRMQHG+ K+RE ++RLKAKRK +E+QYD
Sbjct:  683 ELSKIMMSKKAKRLYGRMQHGIGKKRETIDRLKAKRKAIESQYD 726
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BLAST of mRNA_Ecto-sp13_S_contig13194.2590.1 vs. uniprot
Match: F0WEQ7_9STRA (Pescadillo homolog n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WEQ7_9STRA)

HSP 1 Score: 53.9 bits (128), Expect = 4.180e-5
Identity = 26/45 (57.78%), Postives = 40/45 (88.89%), Query Frame = 0 
Query:  121 EMSRNMMSKKAKRLYGRMQHGLSKRREEVERLKAKRKKLEAQYDA 165
            +M++NMMSKKAKRLY RMQ+GL K+++++++L+AKR +L+ Q DA
Sbjct:  616 DMAKNMMSKKAKRLYDRMQYGLGKKQDKIQQLEAKRARLQQQTDA 660
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13194.2590.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G8B4_ECTSI1.600e-5196.51Pescadillo homolog n=2 Tax=Ectocarpus TaxID=2879 R... [more]
A0A835Z1N0_9STRA6.510e-972.73Pescadillo homolog n=1 Tax=Tribonema minus TaxID=3... [more]
F0WEQ7_9STRA4.180e-557.78Pescadillo homolog n=1 Tax=Albugo laibachii Nc14 T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 142..162

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13194contigEcto-sp13_S_contig13194:3101..4334 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13194.2590.1mRNA_Ecto-sp13_S_contig13194.2590.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13194 1835..4334 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13194.2590.1 ID=prot_Ecto-sp13_S_contig13194.2590.1|Name=mRNA_Ecto-sp13_S_contig13194.2590.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=193bp
GTEAAEAEAGDDVLDVVPGVATDISSSAPAAGTSSRSDDEAEEDGDGEEA
FAKDLERERAGTAFSKAKALEEEDEEEDSSSDDDDNGDSSSGEEEEEDAM
EEVAPPSAEEKKQTEEQEHHEMSRNMMSKKAKRLYGRMQHGLSKRREEVE
RLKAKRKKLEAQYDAPDGMAAKKKKKKSKGSGKKDKERSSSS*
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