mRNA_Ecto-sp13_S_contig10232.259.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig10232.259.1
Unique NamemRNA_Ecto-sp13_S_contig10232.259.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig10232.259.1 vs. uniprot
Match: D7FXE4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE4_ECTSI)

HSP 1 Score: 621 bits (1601), Expect = 4.760e-220
Identity = 305/323 (94.43%), Postives = 313/323 (96.90%), Query Frame = 1
Query:  223 MEFRRRSATSSFGLALLGLLAATTRAAAADTASPNDPISKPDCDSDIEVSIRYAGTTARLYLESADGETRGGCVTLGQIWENRAGKAPLYAVDPDSGDVSETATGTWLLTEELYVEDGITLKVYGTDAGGDADELRLLSTSDTYINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAVSEIVTDQDETCEGNAKNTMGEARMDIESSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGETTVRSRRTN 1191
            MEFRR+SATSSFGLALLGLLA+TT AAAADTASPNDPISKPDCDSDIEVSIRYAGTT RLYLESADGETRGGC TLGQIWE+RAGKAPLYAVDPDSGDVSET TGTWLLTEELYVEDGITLKVYGTD GGDADELRLLSTS+TYINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAVSEIVTD+DETCEGNAKNTMGEARMDIE+SEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHG   + S+R N
Sbjct:    1 MEFRRKSATSSFGLALLGLLASTTPAAAADTASPNDPISKPDCDSDIEVSIRYAGTTKRLYLESADGETRGGCATLGQIWESRAGKAPLYAVDPDSGDVSETETGTWLLTEELYVEDGITLKVYGTDEGGDADELRLLSTSETYINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAVSEIVTDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHG--IIASKRCN 321          
BLAST of mRNA_Ecto-sp13_S_contig10232.259.1 vs. uniprot
Match: A0A6H5JU98_9PHAE (MEP5a protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU98_9PHAE)

HSP 1 Score: 593 bits (1528), Expect = 1.270e-211
Identity = 291/317 (91.80%), Postives = 302/317 (95.27%), Query Frame = 1
Query:  223 MEFRRRSATSSFGLALLGLLAATTRAAAADTASPNDPISKPDCDSDIEVSIRYAGTTARLYLESADGETRGGCVTLGQIWENRAGKAPLYAVDPDSGDVSETATGTWLLTEELYVEDGITLKVYGTDAGGDADELRLLSTSDTYINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAVSEIVTDQDETCEGNAKNTMGEARMDIESSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGETTV 1173
            MEFRR SATSSF LALLGLLAAT RAAAADTASPNDPISKPDCDSDI VSIRYA +T RLYLESADGETRGGCVTLGQIWENRAGKAPLYAVDP+SG+ SE  TGTWLLTEELYVEDGITLKVYGT  GGDADELRLLST+DTYINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISA+SEI+TD+DETCEGNAKNTMGEARMDIE+SEIGYLGFQDSESYGLTWKVRGFCKDKSNP IFD+VNVYGNMYDSDIHH+RFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNG HGE  +
Sbjct:    1 MEFRR-SATSSFCLALLGLLAATMRAAAADTASPNDPISKPDCDSDIAVSIRYASSTKRLYLESADGETRGGCVTLGQIWENRAGKAPLYAVDPESGNESENETGTWLLTEELYVEDGITLKVYGTGEGGDADELRLLSTTDTYINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPGIFDEVNVYGNMYDSDIHHMRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGNHGEAVM 316          
BLAST of mRNA_Ecto-sp13_S_contig10232.259.1 vs. uniprot
Match: D7G339_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G339_ECTSI)

HSP 1 Score: 526 bits (1356), Expect = 6.860e-183
Identity = 263/324 (81.17%), Postives = 284/324 (87.65%), Query Frame = 1
Query:  223 MEFRRRSATSSFGLALLGLLAATTRAAAADTASPNDPISKPDCDSDIEVSIRYAGTTARLYLESAD-GETRGGCVTLGQIWENRAGKAPLYAVDPDSGDVSETATGTWLLTEELYVEDGITLKVYGTDAGGDADELRLLSTSDTYINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAVSEIVTDQDETCEGNAKNTMGEARMDIESSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGETTVRSRRTN 1191
            ME RR +A     LAL+GLLAAT+                    SDI VSIRYAGTTARLYLESAD G TRGGCVTLGQIWE+RAGK PLYAVDPDSG+VS +ATGTWLLTEELYVEDGITLKVYG++AGGDADELRLLST++T+INLRAHGGSLDFV TKVFSWDTSTNSPDEDETDGRSYISA+SEI+TD+DETCEGNAKNTMGEARMDIESSEIGYLG+ DSESYGLTWKVRGFC+DKSNPE+FDDVNVYGN+YDSDIHH+ FGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHG   + S+R N
Sbjct:    1 MELRRSAA-----LALVGLLAATSTXXXXXXXXXXXXXXXXXXXSDIAVSIRYAGTTARLYLESADNGTTRGGCVTLGQIWESRAGKGPLYAVDPDSGNVSTSATGTWLLTEELYVEDGITLKVYGSEAGGDADELRLLSTNETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHG--IIASKRCN 317          
BLAST of mRNA_Ecto-sp13_S_contig10232.259.1 vs. uniprot
Match: D7FXE5_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE5_ECTSI)

HSP 1 Score: 518 bits (1335), Expect = 2.680e-181
Identity = 259/324 (79.94%), Postives = 282/324 (87.04%), Query Frame = 1
Query:  223 MEFRRRSATSSFGLALLGLLAATTRAAAADTASPNDPISKPDCDSDIEVSIRYAGTTARLYLESAD-GETRGGCVTLGQIWENRAGKAPLYAVDPDSGDVSETATGTWLLTEELYVEDGITLKVYGTDAGGDADELRLLSTSDTYINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAVSEIVTDQDETCEGNAKNTMGEARMDIESSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGETTVRSRRTN 1191
            ME RR +A     LAL+GLLAAT+                     DI VSIRYA +TARLYLESAD G TRGGCVTLGQIWE+RAGK PLYAVDPDSG+VS +ATGTWLLTEELYVEDGITL+VYG++AGGDADELRLLST++T+INLRAHGGSLDFV TKVFSWDTSTNSPDEDETDGRSYISA+SEI+TD+DETCEGNAKNTMGEARMDIESSEIGYLG+ DSESYGLTWKVRGFC+DKSNPE+FDDVNVYGN+YDSDIHH+ FGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHG   + S+R N
Sbjct:    1 MELRRSAA-----LALVGLLAATSTXXXXXXXXXXXXXXXXXXXXDIAVSIRYAESTARLYLESADNGTTRGGCVTLGQIWESRAGKGPLYAVDPDSGNVSTSATGTWLLTEELYVEDGITLEVYGSEAGGDADELRLLSTNETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHG--IIASKRCN 317          
BLAST of mRNA_Ecto-sp13_S_contig10232.259.1 vs. uniprot
Match: D8LHA2_ECTSI (Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHA2_ECTSI)

HSP 1 Score: 510 bits (1313), Expect = 8.030e-180
Identity = 253/271 (93.36%), Postives = 261/271 (96.31%), Query Frame = 1
Query:  223 MEFRRRSATSSFGLALLGLLAATTRAAAADTASPNDPISKPDCDSDIEVSIRYAGTTARLYLESADGETRGGCVTLGQIWENRAGKAPLYAVDPDSGDVSETATGTWLLTEELYVEDGITLKVYGTDAGGDADELRLLSTSDTYINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAVSEIVTDQDETCEGNAKNTMGEARMDIESSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTYG 1035
            MEFRRRSATSSFGLALLGLLA+TT AAAADTASPNDPISKPDCDSDIEVSIRYAG T RLYLESADGETRGGC TLGQ+WE+RAGK PLYAVDPDSGDVSET TGTWLLTEELYVEDGITLKVYGTD GGDADELRLLSTSDTYINLRA+GGSLDFVGTKVFSWDTSTNSPD  ETDGRSYISAVSEIVTD+DE+CEG+AKNTMGEARMDIE+SEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYT G
Sbjct:    1 MEFRRRSATSSFGLALLGLLASTTPAAAADTASPNDPISKPDCDSDIEVSIRYAGNTKRLYLESADGETRGGCATLGQVWESRAGKGPLYAVDPDSGDVSETQTGTWLLTEELYVEDGITLKVYGTDEGGDADELRLLSTSDTYINLRAYGGSLDFVGTKVFSWDTSTNSPDVVETDGRSYISAVSEIVTDEDESCEGHAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTDG 271          
BLAST of mRNA_Ecto-sp13_S_contig10232.259.1 vs. uniprot
Match: Q7XAJ7_9PHAE (Mannuronan C-5-epimerase n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ7_9PHAE)

HSP 1 Score: 490 bits (1261), Expect = 1.300e-168
Identity = 235/309 (76.05%), Postives = 266/309 (86.08%), Query Frame = 1
Query:  265 ALLGLLAATTRAAAADTASPNDPISKPDCDSDIEVSIRYAGTTARLYLESADGETRGGCVTLGQIWENRAGKAPLYAVDPDSGDVSETATGTWLLTEELYVEDGITLKVYGTDAGGDADELRLLSTSDTYINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAVSEIVTDQDETCEGNAKNTMGEARMDIESSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGETTVRSRRTN 1191
            AL+G+LA    AA  DT SPN+PI KP+CD  I VSIRY+    RLYLESAD +TRGGCVTL QIWE++ G+APLYAVD  SGD+S++ATGTWLLTEEL+VEDGITLKV+GT AGGDADELRLLSTSDT+INLRAHGGSLDF+ TKVF+WDTS N PD DE DGRSY+SAVSE++TD  +TC G AKN MGEARMDIE SE+GYLG+  SESYGLTWKVRGFC DKSN ++F+DVNVYGN+YDSDIHH  FG+YTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVY+NGYHG   + S+R N
Sbjct:    9 ALVGILALKL-AAGKDTKSPNEPIPKPECDESIAVSIRYSSVYERLYLESADSKTRGGCVTLEQIWEHQRGEAPLYAVDSKSGDISDSATGTWLLTEELFVEDGITLKVHGTSAGGDADELRLLSTSDTFINLRAHGGSLDFLSTKVFAWDTSINGPDRDEEDGRSYVSAVSEVITDDSQTCNGRAKNNMGEARMDIEDSEMGYLGYHGSESYGLTWKVRGFCVDKSNHDLFEDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYDNGYHG--IIASKRCN 314          
BLAST of mRNA_Ecto-sp13_S_contig10232.259.1 vs. uniprot
Match: Q7XAJ8_9PHAE (Mannuronan C-5-epimerase (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ8_9PHAE)

HSP 1 Score: 468 bits (1203), Expect = 3.360e-160
Identity = 218/284 (76.76%), Postives = 250/284 (88.03%), Query Frame = 1
Query:  340 KPDCDSDIEVSIRYAGTTARLYLESADGETRGGCVTLGQIWENRAGKAPLYAVDPDSGDVSETATGTWLLTEELYVEDGITLKVYGTDAGGDADELRLLSTSDTYINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAVSEIVTDQDETCEGNAKNTMGEARMDIESSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGETTVRSRRTN 1191
            KPDCDS I VS+RY   +ARLY+ESA+G TRGGCVTL QIWE +   +PLYAVDP SGDVS +ATGTWLLTEE+YVEDGITL+V+G  AGGDADELRLLSTSDT+I+LRA+GGSLDF+ TKVF+WDTS N+PD+DE+DGRSYISAVSE++TD  +TC G AKN MGEARMDIE+SE+ YLG+  +E+YGLTWKVRGFC DK NPE+FDDVNVYGN+YDSDIHH  FG+YTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEV+NNGYHG   + S+R N
Sbjct:    7 KPDCDSSIAVSVRYNAESARLYIESANGRTRGGCVTLEQIWEQQVDGSPLYAVDPKSGDVSRSATGTWLLTEEMYVEDGITLQVHGISAGGDADELRLLSTSDTFIHLRAYGGSLDFLSTKVFAWDTSKNAPDQDESDGRSYISAVSEVITDDRQTCNGRAKNNMGEARMDIENSEMAYLGYHGTETYGLTWKVRGFCVDKGNPELFDDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVWNNGYHG--IIASKRCN 288          
BLAST of mRNA_Ecto-sp13_S_contig10232.259.1 vs. uniprot
Match: Q7XAK2_9PHAE (Mannuronan C-5-epimerase n=2 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAK2_9PHAE)

HSP 1 Score: 435 bits (1119), Expect = 4.680e-147
Identity = 214/292 (73.29%), Postives = 245/292 (83.90%), Query Frame = 1
Query:  265 ALLGLLAATTRAAAADTASPNDPISKPDCDSDIEVSIRYAGTTARLYLESADGETRGGCVTLGQIWENRAGKAPLYAVDPDSGDVSETATGTWLLTEELYVEDGITLKVYGTDAGGDADELRLLSTSDTYINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAVSEIVTDQDETCEGNAKNTMGEARMDIESSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEV 1140
            A++ LLAA   A AA+T+S N  ISKP C S  +VSIRY+ ++ RLYLESADG+TRGGCVTL +IW++  G APLYAV P SGDVS +ATGTWLLTE+LYVEDGITL+V+GT AGG+A+ELRLLSTS  +INLRAHGGSLDFV TKVF+WDTS N    D +  RSYISAVSEI+TD  E C+G AK TMGEARMDIE SE+ YLG+Q SESYGLTWKVRGFCKD SNPE+FD+VNVYGN+YDSDIHH  FG+YTYGH+QGDWRRNKMH N  YGFDPHDDSDFLTIHDN+V
Sbjct:   12 AIVSLLAARG-ADAANTSSKNKAISKPSCKSSTKVSIRYSASSKRLYLESADGKTRGGCVTLEEIWKDLDGSAPLYAVKPSSGDVSSSATGTWLLTEDLYVEDGITLQVHGTSAGGNANELRLLSTSKDFINLRAHGGSLDFVSTKVFAWDTSKNKVRTDGSKARSYISAVSEIITDSKEKCDGKAKKTMGEARMDIEDSEMAYLGYQGSESYGLTWKVRGFCKDGSNPEVFDEVNVYGNIYDSDIHHNHFGVYTYGHEQGDWRRNKMHHNREYGFDPHDDSDFLTIHDNKV 302          
BLAST of mRNA_Ecto-sp13_S_contig10232.259.1 vs. uniprot
Match: D8LD45_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD45_ECTSI)

HSP 1 Score: 438 bits (1127), Expect = 5.330e-147
Identity = 217/307 (70.68%), Postives = 245/307 (79.80%), Query Frame = 1
Query:  310 DTASPNDPISKPDCDSDIEVSIRYAGTTARLYLESADGETRGGCVTLGQIWENRAG------KAPLYAVDPDSGDVSETATGTWLLTEELYVEDGITLKVYGTDAGGDADELRLLST-------SDTYINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAVSEIVTDQDETCEGNAKNTMGEARMDIESSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGETTVRSRRTN 1191
            DT SPN PI KP+C+S   VSIRY+ TT RLYLE+     RGGCVT+ QIWE R G      KAPLYAVDP SG+ S+  TGTWLL E+LYVEDGITLKV+G  +GG ADELRL ST       + TYINLRAHGGSLDF  TKVF WDT+ NS D DETDGRSYISAVSEIV D  +TCEGNAKNTMGEARMDI +SE+GY+GF DSESYGLTWKVRGFCKDKSNPE+FD VNVYGN+YDS++HH+ F +YTYGHQQGDWRRN +H NSGYG+DPHDDSDFLTIHDN VY+N +HG   + S+R N
Sbjct:  102 DTPSPNTPIPKPECNSTQAVSIRYSATTGRLYLEAGVEGERGGCVTVEQIWEARGGGTTTGAKAPLYAVDPVSGEYSDVITGTWLLEEDLYVEDGITLKVWGNGSGGYADELRLKSTPPTEDGGNGTYINLRAHGGSLDFEHTKVFGWDTTNNSYDMDETDGRSYISAVSEIVLDPTQTCEGNAKNTMGEARMDIVNSEMGYMGFHDSESYGLTWKVRGFCKDKSNPEVFDQVNVYGNIYDSELHHMNFAVYTYGHQQGDWRRNTVHSNSGYGYDPHDDSDFLTIHDNVVYDNNWHG--IIASKRCN 406          
BLAST of mRNA_Ecto-sp13_S_contig10232.259.1 vs. uniprot
Match: A8CEP1_SACJA (Mannuronan C-5 epimerase n=1 Tax=Saccharina japonica TaxID=88149 RepID=A8CEP1_SACJA)

HSP 1 Score: 433 bits (1114), Expect = 2.420e-146
Identity = 218/309 (70.55%), Postives = 247/309 (79.94%), Query Frame = 1
Query:  265 ALLGLLAATTRAAAADTASPNDPISKPDCDSDIEVSIRYAGTTARLYLESADGETRGGCVTLGQIWENRAGKAPLYAVDPDSGDVSETATGTWLLTEELYVEDGITLKVYGTDAGGDADELRLLSTSDTYINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAVSEIVTDQDETCEGNAKNTMGEARMDIESSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGETTVRSRRTN 1191
            A++ LLAA   A AA+TAS N  I+KP C S  +VSIRY+ T+ RLYLESADG TRGGCVTL  IW +  G APLYAV P SGDVS + TGTWLLTE LYVEDGITL+V+G  AGG ADELRLLSTS  +INLRAHGGSLDFV TKVF+WDTS N    D++ GRSYISAVSE++TD  + C+G AK  MGEARMDIE SE+ YLG+  SESYGLTWKVRG C+D SN E+FD VNVYGN+YDSDIHH  FG+YTYGH+QGDWRRNKMH N+ YGFDPHDDSDFLTIHDNEVYNNG HG   + S+R N
Sbjct:    9 AVMTLLAARG-ADAANTASRNKAIAKPSCKSSTKVSIRYSKTSKRLYLESADGNTRGGCVTLEDIWRDLDGGAPLYAVKPSSGDVSSSITGTWLLTESLYVEDGITLQVHGKSAGGKADELRLLSTSKDFINLRAHGGSLDFVSTKVFAWDTSKNKVRTDDSKGRSYISAVSEVITDSKQKCDGRAKKNMGEARMDIEDSEMAYLGYFGSESYGLTWKVRGLCRDLSNLEVFDAVNVYGNIYDSDIHHNYFGVYTYGHEQGDWRRNKMHHNTEYGFDPHDDSDFLTIHDNEVYNNGNHG--IIASKRCN 314          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10232.259.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FXE4_ECTSI4.760e-22094.43Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
A0A6H5JU98_9PHAE1.270e-21191.80MEP5a protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
D7G339_ECTSI6.860e-18381.17Mannuronan C-5-epimerase n=2 Tax=Ectocarpus silicu... [more]
D7FXE5_ECTSI2.680e-18179.94Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
D8LHA2_ECTSI8.030e-18093.36Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectoca... [more]
Q7XAJ7_9PHAE1.300e-16876.05Mannuronan C-5-epimerase n=1 Tax=Laminaria digitat... [more]
Q7XAJ8_9PHAE3.360e-16076.76Mannuronan C-5-epimerase (Fragment) n=1 Tax=Lamina... [more]
Q7XAK2_9PHAE4.680e-14773.29Mannuronan C-5-epimerase n=2 Tax=Laminaria digitat... [more]
D8LD45_ECTSI5.330e-14770.68Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
A8CEP1_SACJA2.420e-14670.55Mannuronan C-5 epimerase n=1 Tax=Saccharina japoni... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10232contigEcto-sp13_S_contig10232:35..3378 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score277.3
Seed ortholog evalue1.1e-71
Seed eggNOG ortholog2880.D8LC73
Model size1191
KEGG koko:K11244
KEGG Pathwayko04011,ko04139,map04011,map04139
Hectar predicted targeting categoryother localisation
Exons8
EggNOG free text desc.protein xylosyltransferase activity
EggNOG OGsKOG4157@1,KOG4157@2759
Cds size1191
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10232.259.1prot_Ecto-sp13_S_contig10232.259.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig10232 35..3378 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462517.5490365-CDS-Ecto-sp13_S_contig10232:34..1381681462517.5490365-CDS-Ecto-sp13_S_contig10232:34..138Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10232 35..138 -
1681462517.5600119-CDS-Ecto-sp13_S_contig10232:313..3671681462517.5600119-CDS-Ecto-sp13_S_contig10232:313..367Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10232 314..367 -
1681462517.5696487-CDS-Ecto-sp13_S_contig10232:565..6801681462517.5696487-CDS-Ecto-sp13_S_contig10232:565..680Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10232 566..680 -
1681462517.5797586-CDS-Ecto-sp13_S_contig10232:991..12071681462517.5797586-CDS-Ecto-sp13_S_contig10232:991..1207Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10232 992..1207 -
1681462517.5895157-CDS-Ecto-sp13_S_contig10232:1473..15871681462517.5895157-CDS-Ecto-sp13_S_contig10232:1473..1587Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10232 1474..1587 -
1681462517.6014614-CDS-Ecto-sp13_S_contig10232:2059..24591681462517.6014614-CDS-Ecto-sp13_S_contig10232:2059..2459Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10232 2060..2459 -
1681462517.616747-CDS-Ecto-sp13_S_contig10232:2638..26741681462517.616747-CDS-Ecto-sp13_S_contig10232:2638..2674Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10232 2639..2674 -
1681462517.6271122-CDS-Ecto-sp13_S_contig10232:3226..33781681462517.6271122-CDS-Ecto-sp13_S_contig10232:3226..3378Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10232 3227..3378 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig10232.259.1

>prot_Ecto-sp13_S_contig10232.259.1 ID=prot_Ecto-sp13_S_contig10232.259.1|Name=mRNA_Ecto-sp13_S_contig10232.259.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=397bp
MLPDATLPLATDLSLLSLPHRHTHTPPFGRKPFGSDPLHKLFNSAPFFGL
VLPLCTCTHAHKLSSSSSSTLNYRMEFRRRSATSSFGLALLGLLAATTRA
AAADTASPNDPISKPDCDSDIEVSIRYAGTTARLYLESADGETRGGCVTL
GQIWENRAGKAPLYAVDPDSGDVSETATGTWLLTEELYVEDGITLKVYGT
DAGGDADELRLLSTSDTYINLRAHGGSLDFVGTKVFSWDTSTNSPDEDET
DGRSYISAVSEIVTDQDETCEGNAKNTMGEARMDIESSEIGYLGFQDSES
YGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTYGHQQGD
WRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGETTVRSRRTN
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mRNA from alignment at Ecto-sp13_S_contig10232:35..3378-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig10232.259.1 ID=mRNA_Ecto-sp13_S_contig10232.259.1|Name=mRNA_Ecto-sp13_S_contig10232.259.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3344bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10232:35..3378- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTTGCCAGACGCGACGCTTCCTCTAGCCACTGACCTCTCACTCCTCTC ACTCCCACACCGTCACACTCACACTCCACCTTTTGGCAGGAAGCCTTTCG GCTCCGATCCTCTGCATAAGCTCTTCAACTCCGCCCCTTTCTTCGGACTA GTGTCTCTCGTGCTGCACTAGGTGAGTGCGTGGTGCCCGGCTGGGCTGCG TCGACCGCGACCGACGCCTTGGATCTCCGTCTCTCGTCTTTTTGTAATTC TTCTTTTGAACGTGGTTTTGGGGGAAGCTTGAATATTGCAGGAGTACTGT CTCTGCGATGATGGATTGCTGTGCAACGATACATAGCGTCAGAGGATCTC AGCAAGAATGCGGGGTGCACCGACGCGGTGTTGTGCGTTGAAGCATGTGA TCTCTCTTGCCCACGCCTACTGAGCATGTACAACGTAAGGACGGCGGTTG GTTTTGAGCCAAGCACAAAGAAACGGTCCGCCGGTTCTCATATCACGTCG AACAGCAGGTTTGAGAGCGGGTGGCAAGCACCCACCATGAAGATTGCATG GAGCCACTGGCAGTTGCTCAGAGTGTTCGCTTGTAGTCTCTGCTGCCAAG CAATGACGCATGGGGCCTGAAGAGCAGTCGGCAACCGATGGTGCAAGCCT TGCTCTCTTTCATCTTCTATCTTGCCGTCGGTATCGATGTGTGGGACCCA CCAGACTCCCCCTGTGCACATGCACACATGCACACAAACTGTGCAGTATA GATGGAACGGTTCTGAACAGTTTCAAATACTGTACGAAGGAACGGCGACA GCCCTGCAGCCTGTGTATAACCCCCCCCACCGCCCTCCCCCCACGGCCGC TGCCACCTTGCATCCCAGTGTCCACACACCGGCGGGCGACGAAAACTCCT CGCCTTTGTGACGCAGGAGCAGCAGCAGCAGCAGCAGCACCCTAAACTAC AGAATGGAGTTCAGAAGAAGAAGCGCGACATCCTCCTTCGGCCTTGCGCT GCTCGGCCTTCTCGCCGCCACCACGCGCGCGGCAGCAGCTGACACCGCCT CCCCCAACGACCCCATCTCCAAGCCCGACTGCGACTCCGACATCGAGGTC TCGATTCGGTACGCCGGCACCACGGCGCGCCTGTATCTCGAGTCGGCAGA TGGCGAGACCCGCGGCGGCTGCGTTACACTCGGGCAGATCTGGGAGAACC GTGCCGGCAAGGCGCCGCTGTACGCGGTGGACCCGGACTCTGGCGACGTG AGCGAGACCGCGACTGGCACGTGGCTCCTCACGGAGGAGCTGTATGTGGA GGACGGCATCACGCTCAAGGTTCGTGTCGAAGCTGGCGTGCTTGTTTCAT GATTCCAACGATGCAAAAAAAAAAAAGTCATCCGAAAGTTCGTAACGTGT CACGTCCAAAGTGTTCGTTTTGGTCCAGCCGTACTTGTGGGTTTTGTCGG GGATTAAAAAATTGTCCGATGCGTTTTGTTCAGCAGCAGTCAAGGTGGTT GTTGCCCTGCTGGCTTTTGTTTCGCCATGTCTGGTTCAGTCTGCAGGTGA TGCAACGATACATCAGCCTCAGTTTGGATGTTACGACTTCGTCGCCTCGT CCGTGAAAATATTTATATTTCTTTTATGAATGCAACCACAACCGCCTTGT TCCTCTTCTGTTGTATGCGTATACCTTGTATACAAGTTGATCTCGTATCT AATTTCATTGCGATATTGTTGCATACCAGGTACAGTATCCGCCCGTCGTA TTTATAATAGTTTTTTGTGATCGCTTTCCACCGGCGAACAGGTGTACGGG ACGGACGCGGGGGGAGATGCCGACGAACTCAGGTTGCTGAGCACAAGCGA CACCTACATCAACCTCAGAGCACACGGTGGCAGCCTGGACTTCGTGGGCA CGAAAGTAAGCAACAGGGGGCAGCAAGCAATGTGCGCTTCTACCTGTTCT CTTGCCGGCGGAAAAGCCTTCTCCACAAACCCAGGCATTGTTTGCCGTGA TCGGGCGTGCTTTCTCGCGTCTGTTTGCTACTGCTTCTCCCCTTCCCCTG CGGAAAAGTACCGGCAATCGCACGTTTTGTGTCGCCCACCAACACATCTG TCGATAACCTTTGCAAATCTCGCTTCATCCGCTCCATTGCCATCTAACAA CCAACCCATGTATGTACTCAGGTCTTTTCGTGGGACACGAGCACCAACTC GCCGGACGAAGACGAAACCGACGGCCGGTCGTACATCAGCGCCGTTTCGG AGATCGTCACCGACCAGGACGAGACTTGCGAGGGAAATGCCAAGAACACC ATGGGGGAGGCCCGCATGGACATCGAGAGCAGCGAGATCGGCTACCTGGG GTTCCAGGACAGCGAGAGCTACGGGCTCACGTGGAAGGTAAGCAATTTTT GGTTGTGATGTCTCGTCGATGAATTTTCGGCGTTGGAAAATCGGACTTCA CTTGACGGGTCGCCAGTTGGCTTGAACGGAATCATGGGTTTGAGATGGGA CGTAGACAGTGGAATTTAAAGTGTACCTGGTAGTCTGTAGTCTCACTTCC ATACTTCAAAAACAGCAAACCAACACAAATTAATGTTTTTTTTATACCCA ACGTCATGTGGGCCATACTTCCGTCTACAGCACAACGATGCCAAAACACG TAACATTGCTGCCTTGATTGTTGAAACGCGGATGAATGTCCCTCCCAGGT TCGCGGGTTCTGCAAGGATAAGTCTAACCCGGAGATTTTCGACGACGTGA ATGTGTACGGAAACATGTACGACAGCGACATCCACCACTTGCGCTTCGGC CTCTACACCTACGGTAAGATTCACTCGCCGTTGTCACTCGTGGGTATCGC TGGAATGTGTGACACTTACTTTGCGTAGCACCAGTATTTCCCGCGGTTTA TTTTCAATCTAAAGACGTGGTGAAAGATTCTATCTTGCGGGGGTCTACAG CCGGAACTTGTAACCCCTCACTCGATCACGCCCGTGCCCTGTCCATCACG CCGTCTGACAGGCCACCAGCAGGGAGACTGGAGGAGGAACAAGATGCACG ACAACTCCGGATACGGTGAGCTACGGTTTTTCTTGGTTGAGTCGAAGAAT CGCCTGAAAACTGGCGGGATCTCTCGTGATAATGTATTGGTAGTGTTTCC GATACACAATCCCCTTGCACCCTCAACGCCGTAGCTCAACATTTTTTTTC GCGCTGTTCACCTTGCTTGTTCTGTGTTGCCACCGGCCAGGCTTTGACCC CCACGACGACAGCGACTTCCTCACCATCCACGACAACGAGGTGTACAACA ACGGCTACCACGGTGAGACTACTGTACGATCAAGACGAACAAAC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10232:35..3378-

>mRNA_Ecto-sp13_S_contig10232.259.1 ID=mRNA_Ecto-sp13_S_contig10232.259.1|Name=mRNA_Ecto-sp13_S_contig10232.259.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1191bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10232:35..3378- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTTGCCAGACGCGACGCTTCCTCTAGCCACTGACCTCTCACTCCTCTC
ACTCCCACACCGTCACACTCACACTCCACCTTTTGGCAGGAAGCCTTTCG
GCTCCGATCCTCTGCATAAGCTCTTCAACTCCGCCCCTTTCTTCGGACTA
GTACTCCCCCTGTGCACATGCACACATGCACACAAACTCAGCAGCAGCAG
CAGCAGCACCCTAAACTACAGAATGGAGTTCAGAAGAAGAAGCGCGACAT
CCTCCTTCGGCCTTGCGCTGCTCGGCCTTCTCGCCGCCACCACGCGCGCG
GCAGCAGCTGACACCGCCTCCCCCAACGACCCCATCTCCAAGCCCGACTG
CGACTCCGACATCGAGGTCTCGATTCGGTACGCCGGCACCACGGCGCGCC
TGTATCTCGAGTCGGCAGATGGCGAGACCCGCGGCGGCTGCGTTACACTC
GGGCAGATCTGGGAGAACCGTGCCGGCAAGGCGCCGCTGTACGCGGTGGA
CCCGGACTCTGGCGACGTGAGCGAGACCGCGACTGGCACGTGGCTCCTCA
CGGAGGAGCTGTATGTGGAGGACGGCATCACGCTCAAGGTGTACGGGACG
GACGCGGGGGGAGATGCCGACGAACTCAGGTTGCTGAGCACAAGCGACAC
CTACATCAACCTCAGAGCACACGGTGGCAGCCTGGACTTCGTGGGCACGA
AAGTCTTTTCGTGGGACACGAGCACCAACTCGCCGGACGAAGACGAAACC
GACGGCCGGTCGTACATCAGCGCCGTTTCGGAGATCGTCACCGACCAGGA
CGAGACTTGCGAGGGAAATGCCAAGAACACCATGGGGGAGGCCCGCATGG
ACATCGAGAGCAGCGAGATCGGCTACCTGGGGTTCCAGGACAGCGAGAGC
TACGGGCTCACGTGGAAGGTTCGCGGGTTCTGCAAGGATAAGTCTAACCC
GGAGATTTTCGACGACGTGAATGTGTACGGAAACATGTACGACAGCGACA
TCCACCACTTGCGCTTCGGCCTCTACACCTACGGCCACCAGCAGGGAGAC
TGGAGGAGGAACAAGATGCACGACAACTCCGGATACGGCTTTGACCCCCA
CGACGACAGCGACTTCCTCACCATCCACGACAACGAGGTGTACAACAACG
GCTACCACGGTGAGACTACTGTACGATCAAGACGAACAAAC
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