prot_Ecto-sp13_S_contig13192.2588.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13192.2588.1
Unique Nameprot_Ecto-sp13_S_contig13192.2588.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length651
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig13192.2588.1 vs. uniprot
Match: A0A6H5L1J2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1J2_9PHAE)

HSP 1 Score: 275 bits (704), Expect = 7.260e-76
Identity = 397/568 (69.89%), Postives = 410/568 (72.18%), Query Frame = 0 
Query:   84 RVSGMKEENRALEERLARQEAVLSQAEVEAEAQQAEKSSLAVAVRSLETDRDNLRAEVAKAERLAAELAAAHKEEQLKASQNADQETTPESDTPVVTTPMDSEQDTAAATALAADLRTQLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQGKTQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVATAEERARAAGSKLEDERARAEAALRQVEELRAVLEETGREGEAAAGARAEAEELRGQLEGTRQELGEVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVGEAREAAXXXXXXXXXXXXXXXXXXXXLRXXMMLALEQAEEESSELRHQINAAEATIADMDATRAAANQETAALRAELAAAAEQXXXXXXXXXXXXXXXXXXXXXXXXXMLRRELVAXXXXXVGAERREGAERVAAVEREMEGLRVKLSE 651
            RVSGMKEENRAL                           LAVAVRSLET+RDNLRAEVAKAERLAAELAAA+KEEQLK SQN DQ+TTPES TP+VTT  DSEQDTAAATAL ADLRT+L+                              LQ KT A       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                              VATAEERAR AG KLEDERARAEAALR+VEELRAVLEETGREGEAAAGARAEAEEL+GQLEGTR+EL EVE                             A+GEAR AAXXXXXXXXXXXXX       LR  MMLALEQAEEESSELRHQINAAEATIADMDATRAAAN+ETAALRAELAAAA  XXXXXXXXXXXXXXXXXX       MLRRELVA     +GAERREGAERVAAVERE+EGLRVKLSE
Sbjct:  761 RVSGMKEENRALXXXXXXXXXXXXXXXXXXXXXXXXXXXLAVAVRSLETERDNLRAEVAKAERLAAELAAAYKEEQLKISQNTDQDTTPESGTPLVTTTTDSEQDTAAATALVADLRTKLQQVTVAHEEAQAGLREEVVEAATSLEKAEAALQVKTHALEETRQNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTA----------------------------VATAEERAREAGGKLEDERARAEAALREVEELRAVLEETGREGEAAAGARAEAEELQGQLEGTRKELREVEEALSSQTSKTEDALARLSSMEQELALMEQALGEARGAAXXXXXXXXXXXXXTAAATSALREEMMLALEQAEEESSELRHQINAAEATIADMDATRAAANEETAALRAELAAAAXXXXXXXXXXXXXXXXXXXXELSAAQEMLRRELVAEREAALGAERREGAERVAAVEREVEGLRVKLSE 1300
[Close]
BLAST of mRNA_Ecto-sp13_S_contig13192.2588.1 vs. uniprot
Match: D7FJX4_ECTSI (Methyl-accepting transducer domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJX4_ECTSI)

HSP 1 Score: 163 bits (412), Expect = 3.030e-38
Identity = 339/391 (86.70%), Postives = 345/391 (88.24%), Query Frame = 0 
Query:   88 MKEENRALEERLARQEAVLSQAEVEAEAQQAEKSSLAVAVRSLETDRDNLRAEVAKAERLAAELAAAHKEEQLKASQNADQETTPESDTPVVTTPMDSEQDTAAATALAADLRTQLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQGKTQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXV--------ATAEERARAAGSKLEDERARAEAALRQVEELRAVLEETGREGEAAAGARAEAEELRGQLEGTRQELGEVE 470
            MKEENRALEE                      KSSLAVAV +LET+RDNLRAEVAKAERLAAELAAAHKEEQLKASQN DQ+T+PESDTPVV TP DSEQDTAAATAL ADLRTQL XXXXXXXXXXXXXXXXXXXXXXXXXXXXX LQGKTQA     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX         ATAEE+AR AG KLEDERARAEAALRQVEELRAVLE+TGREGEAAAGARAEAEELR QLEGTRQELGEVE
Sbjct:  610 MKEENRALEEXXXXXXXXXXXXXXXXXXXXXXKSSLAVAVGNLETERDNLRAEVAKAERLAAELAAAHKEEQLKASQNKDQDTSPESDTPVVMTPTDSEQDTAAATALVADLRTQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALQGKTQALEETRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATAEEQAREAGGKLEDERARAEAALRQVEELRAVLEQTGREGEAAAGARAEAEELRRQLEGTRQELGEVE 1000
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13192.2588.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L1J2_9PHAE7.260e-7669.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FJX4_ECTSI3.030e-3886.70Methyl-accepting transducer domain-containing prot... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 591..611
NoneNo IPR availableCOILSCoilCoilcoord: 445..472
NoneNo IPR availableCOILSCoilCoilcoord: 78..119
NoneNo IPR availableCOILSCoilCoilcoord: 372..441
NoneNo IPR availableCOILSCoilCoilcoord: 127..161
NoneNo IPR availableCOILSCoilCoilcoord: 228..332
NoneNo IPR availableCOILSCoilCoilcoord: 480..585
NoneNo IPR availableCOILSCoilCoilcoord: 26..74
IPR004089Methyl-accepting chemotaxis protein (MCP) signalling domainPROSITEPS50111CHEMOTAXIS_TRANSDUC_2coord: 290..559
score: 11.16

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13192contigEcto-sp13_S_contig13192:1..4561 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13192.2588.1mRNA_Ecto-sp13_S_contig13192.2588.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13192 1..4561 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13192.2588.1 ID=prot_Ecto-sp13_S_contig13192.2588.1|Name=mRNA_Ecto-sp13_S_contig13192.2588.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=651bp
ATERAETAESETETLREAFSQATRGTETAESEMEALREAVSQAEQRADAS
ESRIETLDEALAHARGRAEAAEAAAGGVGEAEVRVSGMKEENRALEERLA
RQEAVLSQAEVEAEAQQAEKSSLAVAVRSLETDRDNLRAEVAKAERLAAE
LAAAHKEEQLKASQNADQETTPESDTPVVTTPMDSEQDTAAATALAADLR
TQLEQETVAHEEAQAGLREKLVKAATSLEEAEAALQGKTQALEGTRRNLE
NSQQDLEGNRRDLHETRQNLEETQQHLEATRQNLKESRQSLEESRQDLGE
TRQNLEETRQDLEETSAKLEETEAARAELDLEVSTRAAQEQAAAASCEAA
ETALGLAEEAAAAGRAELGAELGSALESLGEARRELDEARRAQGEAQAAV
ATAEERARAAGSKLEDERARAEAALRQVEELRAVLEETGREGEAAAGARA
EAEELRGQLEGTRQELGEVEEALSSQTSKTEDALARLSSMEQELALMEQA
VGEAREAAAAAAAAEAEADEEMAAATSALREEMMLALEQAEEESSELRHQ
INAAEATIADMDATRAAANQETAALRAELAAAAEQATEAAAAAAQAARVE
AEAELSAAQEMLRRELVAEREAAVGAERREGAERVAAVEREMEGLRVKLS
E
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004089MCPsignal_dom