prot_Ecto-sp13_S_contig1318.2579.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1318.2579.1
Unique Nameprot_Ecto-sp13_S_contig1318.2579.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length1152
Homology
BLAST of mRNA_Ecto-sp13_S_contig1318.2579.1 vs. uniprot
Match: D8LDP3_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDP3_ECTSI)

HSP 1 Score: 1574 bits (4076), Expect = 0.000e+0
Identity = 1010/1156 (87.37%), Postives = 1021/1156 (88.32%), Query Frame = 0
Query:    1 MGGRGQGRRGSVRSPPRPSGPPRAYGSPTDGAARKALPTRSSPQGVLRGAGEGXXXXXXGRLLRRFRTKARRRGLGGDVRQMRHVIAARVLQDTPPRKTGGGNPSVTRSDSAWGWDGEEGEGGGNELEDVELLAGMASSDTNYAEVRSRLNGQILELMAANVSEALPRYCLPSAIARVEAKKPGEKKRALPKVDLSFPITFSSXXXXXXXXXXXXXXXXXXXXXXXMPHHGERGDGEAAEAMLPRVHHFVMTVPRKRLSPSASPRVGSQSRMSTGRGGEEEGSRRXXXXXXXXXXXXXXXXXXXXDGSVNRQESDRRWAIAKAPQGTFPAAIDRDSNIVLHGACLTVWRKADHEE-DEGDLWGRDSDDDDEEDGARAKTTAYVPRCVCALSFDPLFDTLRAVALARGGHPETARALMVGRGDGGVELSAAAQRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-EKAGVRLEWGLGDAATLKAGRPPLPILPPPPPTPGPTLPSVFAPSLSREAGGDAAGPLRKPPPLVQSNSAPDSMGDWSSTGEGGYSTEEEGPWRGXXXXXXXX-AIXXXSGDRIAGGLSAFGLPPLVPLDHPVEPLFQALSSDNVLLALSALMCERPVLVTCSVRSLLSVAVSSLKALLHPLDWHHAYAPLLPAAEVVSFWRSKVALDKKTALNHGRSGSPPRITPGSWGASGRGGRGIPGGGGGSPP--TPRVRATPFLVGLDGELVRMAMRKGGGSGKGVKAGPRGAGEVWGVASSEPCMVPEGAEEEAGASGIATTQPSSALLEVVRCMVKQSVHVDLDHDDITWPPPQAPDPTPAEEGGVGGTAKADSLGSGKEKKNGGEEAAGADATGEEGGGVGAPPVWPEEAARRARRVVQSTLFPDFETFDVVSETPPQVDDFDDDDDSALFKCSGLSGGGAEASLRDKVEAFRTSAAAASAPRRGISGGAGTLTESIVGMYIPTAADLALRAAVAGLVASVLGRVKEFTTLFAQAGLMRFDTAGFVKAVATRGSGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXTATGSAPSGVSEGSGAPAGXXXXXXXXXXXXXXPVVVGAAAVDDGSVAEGAGGEGGLCGVPGTELCMELVRTRAFAALLSDEVFADVDLETVQGELRLHSRQIRKSAPS 1151
            M GRGQGRRGSVRSPPRPSGPPRAYGSPTDGA R A P RSSPQGV  GAGE XXXXXXGRLLRRFRTK         VRQMRHVIAARVLQD PPRKTGGG+PSV RSDSAWGWDGEEGEGG +ELEDVELLAGMASSDTNYAEVRSRLNGQILELMAANV+EALPRYCLPSAIARVEAKKPGEKKR LPKVDLSFPITFSSXXXXXXXXXXXXXXXXXXXXXXX+ HHGERGDGEAAEAMLPRVHHFVMTVPRKR SPS SPRVGS SRMSTGRGG  EGS  XX     XXXXXXXXXXXX  G VNRQESDRRWAIAKA QGTFPAAIDRDSNIVLHGACLTVWRKAD +E DEGDLWGRDSDDDDEEDGARAKTTAYVPRCVCALSFDPLFDTLRAVALARGGHPETARALMVGRG GGVELSA     XXXXXXXXXXXXXXXXXXXXXXXXXXXXX EKAG+RLEWGLGDAATLKAGRPPLPILPPPPPTPGPTLPSVFAPSLSR+AGGDAA  LRKPPPLVQSNSAPDSMG WSSTGEGGYSTEEEGPWRGXXXXXXXX AI   SGDRIAGGLSAFGLPPLVPLDHPVEPLFQALSSDNVLLALSALMCERPVLVTCSVRSLLS+AVSSLKALLHPLDWHHAYAPLLPAAEV        ALDKKTALNHG SGSPPR+TPGSWG SGRGGRG PG         TPRVRATPFLVGLDGELVRMAMRKGGGSGKGVKAGP G GEVWGVASSE CMVPEGAEEEAGASGIATTQPS ALLEVVRCMVKQSVHVDLDHDDITWPPPQAPD  PAEEG  GGTAK DSLGSGKE                    VGAPPVWPEEAARRARRVV+STLFPDFETFDV       VDD D DDDSALFKCSGLSGGG EASLRDKVEA RTSAAAASAPRRG+SGGAGTLTESIVGMYIPT ADLALRAAVAGLVASVLGRVKEFTTLFAQAGLMRFDTAGFVKAVA    GG       XXXXXXXXXXXXXXXXXXXXX  TGSAPSGVSE       XXXXXXXXXXXXXXPVVVGAAAVDDGSVAEGAGGEGGLCGVPGTELCMELVRTRAFAALLSDEVFADVDLETVQGELRLHSRQIRKSAPS
Sbjct:  315 MKGRGQGRRGSVRSPPRPSGPPRAYGSPTDGAGRMASPARSSPQGVPPGAGEXXXXXXXGRLLRRFRTK---------VRQMRHVIAARVLQDMPPRKTGGGDPSVPRSDSAWGWDGEEGEGGEDELEDVELLAGMASSDTNYAEVRSRLNGQILELMAANVTEALPRYCLPSAIARVEAKKPGEKKRTLPKVDLSFPITFSSXXXXXXXXXXXXXXXXXXXXXXXLRHHGERGDGEAAEAMLPRVHHFVMTVPRKRSSPSVSPRVGSPSRMSTGRGGGGEGSXXXXREGAGXXXXXXXXXXXXRKG-VNRQESDRRWAIAKATQGTFPAAIDRDSNIVLHGACLTVWRKADSDEGDEGDLWGRDSDDDDEEDGARAKTTAYVPRCVCALSFDPLFDTLRAVALARGGHPETARALMVGRGGGGVELSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKAGLRLEWGLGDAATLKAGRPPLPILPPPPPTPGPTLPSVFAPSLSRDAGGDAARTLRKPPPLVQSNSAPDSMGGWSSTGEGGYSTEEEGPWRGXXXXXXXXXAIGGRSGDRIAGGLSAFGLPPLVPLDHPVEPLFQALSSDNVLLALSALMCERPVLVTCSVRSLLSLAVSSLKALLHPLDWHHAYAPLLPAAEV--------ALDKKTALNHGGSGSPPRLTPGSWGPSGRGGRGSPGXXXXXXXXXTPRVRATPFLVGLDGELVRMAMRKGGGSGKGVKAGPAGPGEVWGVASSEACMVPEGAEEEAGASGIATTQPSPALLEVVRCMVKQSVHVDLDHDDITWPPPQAPDTPPAEEGEGGGTAKTDSLGSGKEXXXXXXXXXXXXXXXXXXXXVGAPPVWPEEAARRARRVVKSTLFPDFETFDV-------VDDLDXDDDSALFKCSGLSGGGVEASLRDKVEACRTSAAAASAPRRGVSGGAGTLTESIVGMYIPTTADLALRAAVAGLVASVLGRVKEFTTLFAQAGLMRFDTAGFVKAVAI--CGGGSKTDAGXXXXXXXXXXXXXXXXXXXXXXXTGSAPSGVSEXXXXXXXXXXXXXXXXXXXXXPVVVGAAAVDDGSVAEGAGGEGGLCGVPGTELCMELVRTRAFAALLSDEVFADVDLETVQGELRLHSRQIRKSAPS 1443          
BLAST of mRNA_Ecto-sp13_S_contig1318.2579.1 vs. uniprot
Match: A0A6H5JQ29_9PHAE (DENN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ29_9PHAE)

HSP 1 Score: 1280 bits (3311), Expect = 0.000e+0
Identity = 818/1031 (79.34%), Postives = 832/1031 (80.70%), Query Frame = 0
Query:  136 MASSDTNYAEVRSRLNGQILELMAANVSEALPRYCLPSAIARVEAKKPGEKKRALPKVDLSFPITFSSXXXXXXXXXXXXXXXXXXXXXXXMP---HHGERGDGEAAEAMLPRVHHFVMTVPRKRLSPSASPRVGSQSRMSTGRGGEEEGSRRXXXXXXXXXXXXXXXXXXXXDGSVNRQESDRRWAIAKAPQGTFPAAIDRDSNIVLHGACLTVWRKADHEED-EGDLWGRDSDDDDEEDGARAKTTAYVPRCVCALSFDPLFDTLRAVALARGGHPETARALMVGRGDGGVELSAAAQRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--EKAGVRLEWGLGDAATLKAGRPPLPILPPPPPTPGPTLPSVFAPSLSREAGGDAAGPLRKPPPLVQSNSAPDSMGDWSSTGEGGYSTEEEGPWRGXXXXXXXXAIXXXSGDRIAGG-LSAFGLPPLVPLDHPVEPLFQALSSDNVLLALSALMCERPVLVTCSVRSLLSVAVSSLKALLHPLDWHHAYAPLLPAAEVVSFWRSKVALDKKTALNHGRSGSPPRITPGSWGASGRGGRGIPGGGGGSPPTPRVRATPFLVGLDGELVRMAMRKGGGSGKGVKAGPRGAGEVWGVASSEPCMVPEGAEEEAGASGIATTQPSSALLEVVRCMVKQSVHVDLDHDDITWPPPQAPDPTPAEEGGVGGTAKADSLGSGKEKKNGGEEAAGADATGEEGGG-------VGAPPVWPEEAARRARRVVQSTLFPDFETFDVVSETPPQVDDFDDDDD-SALFKCSGLSGGGAEASLRDKVEAFRTSAAAASAPRRGISGGAGTLTESIVGMYIPTAADLALRAAVAGLVASVLGRVKEFTTLFAQAGLMRFDTAGFVKAVATRGSGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXTATGSAPSGVSEGSGAPAGXXXXXXXXXXXXXXPVVVGAAAVDDGSVAEGAGGEGGLCGVPGTELCMELVRTRAFAALLSDEVFADVDLETVQGELRLHSRQIRKSAPS 1151
            MASSDTNYAEVRSRLNGQILELMAANV+EALPRYCLPSAIARVEAKKPGEKKRALPKVDLSFPITFSS    XXXXXXXXXXXXXXXXX  +P   HHGERGDGEAAEAMLPRVHHFVMTVPRKR                       +GSR+                       VN QES+RRWAIAKA QGTFPAAIDRDSNIVLHGACLTVWRKAD +ED EGDLWGRDSD    EDG RAKTTAYVPRCVCALSFDPLFDTLRAVALARGGHPETARALMVGRG GGVELSA     XXXXXXXXXXXXXXXXXXXXXXXXXXXXX  EKAG+RLEWGLGDAATLKAGRPPLPILPPPPP PGPTLPS+FAPSLSREAGGDA G LR PPPLVQSNSAPDSMG WS TGE             XXXXXXXX  XXX         LSAFGLPPLVPLDHPVEPLFQALSSDNVLLALSALMCERPVLVTCSVRSLLS+AVSSLKALLHPLDWHHAYAPLLPAAEVVSFWRSKVALDKKTALNHGRSGSPPRITPGSWGASGRGGRG PG     PPTPRVRATPFLVGLDGELVRMAMR GGGSGKGV         VWGVASSEPCMVPEGAEEEAGASGIATTQPS ALLEVVRC+VKQSVHVDLDHDDITWPPPQAPDP+ A        +K DSLGSGKEKK G EEAAGA  TG+EG         VG P VWPEEAARRARRVVQSTLFPDFETFDVVSETPPQVDDFD     SALFKCSGLSGGGAEASLRDKVEA RTSAAAASA RRGISGGAGTLTESIVGMYIPTAADLALRAAVAGLVASVLGRVKEFTTLFAQAGLMRFDTAGFVKAVATRG GG                  XXXXXXXXXX                    XXXX         PVVVGAAAVDDG+VAEGAGGEGGLCGVPGTELCMELVRTRAFAALLSDEVFADVDLETVQGELRLHSRQIRKSAPS
Sbjct:    1 MASSDTNYAEVRSRLNGQILELMAANVTEALPRYCLPSAIARVEAKKPGEKKRALPKVDLSFPITFSSSSSLXXXXXXXXXXXXXXXXXLPLPPLPHHGERGDGEAAEAMLPRVHHFVMTVPRKRTG----------GXXXXXXXXXXDGSRK----------------------GVNLQESERRWAIAKATQGTFPAAIDRDSNIVLHGACLTVWRKADSDEDDEGDLWGRDSDXXXXEDGTRAKTTAYVPRCVCALSFDPLFDTLRAVALARGGHPETARALMVGRGGGGVELSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEKAGMRLEWGLGDAATLKAGRPPLPILPPPPPNPGPTLPSLFAPSLSREAGGDATGMLRNPPPLVQSNSAPDSMGGWSFTGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSAFGLPPLVPLDHPVEPLFQALSSDNVLLALSALMCERPVLVTCSVRSLLSLAVSSLKALLHPLDWHHAYAPLLPAAEVVSFWRSKVALDKKTALNHGRSGSPPRITPGSWGASGRGGRGSPGXXXXPPPTPRVRATPFLVGLDGELVRMAMRNGGGSGKGV---------VWGVASSEPCMVPEGAEEEAGASGIATTQPSPALLEVVRCIVKQSVHVDLDHDDITWPPPQAPDPSTAXXXXXXXXSKTDSLGSGKEKKKGXEEAAGA--TGDEGXXXXXXXXXVGVPLVWPEEAARRARRVVQSTLFPDFETFDVVSETPPQVDDFDXXXXXSALFKCSGLSGGGAEASLRDKVEACRTSAAAASASRRGISGGAGTLTESIVGMYIPTAADLALRAAVAGLVASVLGRVKEFTTLFAQAGLMRFDTAGFVKAVATRGIGGGSKTDAGGGNSVLVGSGSXXXXXXXXXXXXXXXXXXXXXXXX------XXXXSNTVDDEAAPVVVGAAAVDDGNVAEGAGGEGGLCGVPGTELCMELVRTRAFAALLSDEVFADVDLETVQGELRLHSRQIRKSAPS 982          
BLAST of mRNA_Ecto-sp13_S_contig1318.2579.1 vs. uniprot
Match: A0A6H5JUK7_9PHAE (RGS domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUK7_9PHAE)

HSP 1 Score: 171 bits (432), Expect = 2.060e-40
Identity = 100/118 (84.75%), Postives = 100/118 (84.75%), Query Frame = 0
Query:    3 GRGQGRRGSVRSPPRPSGPPRAYGSPTDGAARKALPTRSSPQGVLRGAGEGXXXXXXGRLLRRFRTKARRRGLGGDVRQMRHVIAARVLQDTPPRKTGGGNPSVTRSDSAWGWDGEEG 120
            GRGQGRRG VRSPPRPSGPPRAYGSPTDGAARKA PTRSSPQGV  GAGE XXXXXX RLLRRFRTK         VRQMRHVIAARVLQD PPRKTGGGNPSV RSDSAW WDGEEG
Sbjct:  568 GRGQGRRGFVRSPPRPSGPPRAYGSPTDGAARKASPTRSSPQGVPPGAGEXXXXXXXXRLLRRFRTK---------VRQMRHVIAARVLQDMPPRKTGGGNPSVPRSDSAWEWDGEEG 676          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1318.2579.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LDP3_ECTSI0.000e+087.37RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JQ29_9PHAE0.000e+079.34DENN domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5JUK7_9PHAE2.060e-4084.75RGS domain-containing protein (Fragment) n=1 Tax=E... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001194cDENN domainSMARTSM00799DENN_clscoord: 381..671
e-value: 1.3E-5
score: 19.9
IPR001194cDENN domainPFAMPF02141DENNcoord: 591..656
e-value: 5.7E-11
score: 42.7
NoneNo IPR availableGENE3D3.40.50.11500coord: 585..666
e-value: 4.0E-14
score: 54.5
NoneNo IPR availablePANTHERPTHR12296:SF21DENN DOMAIN-CONTAINING PROTEIN 3coord: 242..399
coord: 590..655
NoneNo IPR availablePANTHERPTHR12296C-MYC PROMOTER BINDING PROTEINcoord: 242..399
coord: 590..655

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1318contigEcto-sp13_S_contig1318:912..12684 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1318.2579.1mRNA_Ecto-sp13_S_contig1318.2579.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1318 702..13502 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1318.2579.1 ID=prot_Ecto-sp13_S_contig1318.2579.1|Name=mRNA_Ecto-sp13_S_contig1318.2579.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1152bp
MGGRGQGRRGSVRSPPRPSGPPRAYGSPTDGAARKALPTRSSPQGVLRGA
GEGGGGGAGGRLLRRFRTKARRRGLGGDVRQMRHVIAARVLQDTPPRKTG
GGNPSVTRSDSAWGWDGEEGEGGGNELEDVELLAGMASSDTNYAEVRSRL
NGQILELMAANVSEALPRYCLPSAIARVEAKKPGEKKRALPKVDLSFPIT
FSSSSSLSSSSSESSLASSANEPPPPMPHHGERGDGEAAEAMLPRVHHFV
MTVPRKRLSPSASPRVGSQSRMSTGRGGEEEGSRRGRREGAGSTGGGGGG
GGGGGDGSVNRQESDRRWAIAKAPQGTFPAAIDRDSNIVLHGACLTVWRK
ADHEEDEGDLWGRDSDDDDEEDGARAKTTAYVPRCVCALSFDPLFDTLRA
VALARGGHPETARALMVGRGDGGVELSAAAQRDHHLVSSSSGGGESLATA
AGGAAVAAAGGGEKAGVRLEWGLGDAATLKAGRPPLPILPPPPPTPGPTL
PSVFAPSLSREAGGDAAGPLRKPPPLVQSNSAPDSMGDWSSTGEGGYSTE
EEGPWRGGGGGGGGGAIGGGSGDRIAGGLSAFGLPPLVPLDHPVEPLFQA
LSSDNVLLALSALMCERPVLVTCSVRSLLSVAVSSLKALLHPLDWHHAYA
PLLPAAEVVSFWRSKVALDKKTALNHGRSGSPPRITPGSWGASGRGGRGI
PGGGGGSPPTPRVRATPFLVGLDGELVRMAMRKGGGSGKGVKAGPRGAGE
VWGVASSEPCMVPEGAEEEAGASGIATTQPSSALLEVVRCMVKQSVHVDL
DHDDITWPPPQAPDPTPAEEGGVGGTAKADSLGSGKEKKNGGEEAAGADA
TGEEGGGVGAPPVWPEEAARRARRVVQSTLFPDFETFDVVSETPPQVDDF
DDDDDSALFKCSGLSGGGAEASLRDKVEAFRTSAAAASAPRRGISGGAGT
LTESIVGMYIPTAADLALRAAVAGLVASVLGRVKEFTTLFAQAGLMRFDT
AGFVKAVATRGSGGGSKTDAGGGNAGGGSFALVGGGGGGGASTATGSAPS
GVSEGSGAPAGGHAAGSNTADDEAAPVVVGAAAVDDGSVAEGAGGEGGLC
GVPGTELCMELVRTRAFAALLSDEVFADVDLETVQGELRLHSRQIRKSAP
S*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001194cDENN_dom