prot_Ecto-sp13_S_contig13159.2563.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13159.2563.1
Unique Nameprot_Ecto-sp13_S_contig13159.2563.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length228
Homology
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BLAST of mRNA_Ecto-sp13_S_contig13159.2563.1 vs. uniprot
Match: A0A6H5KLD9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLD9_9PHAE)

HSP 1 Score: 292 bits (747), Expect = 6.970e-97
Identity = 168/227 (74.01%), Postives = 180/227 (79.30%), Query Frame = 0 
Query:    1 MGQATNSISARISIRMAGHTTTKIKPLEEDKAIADGGDLLAEGFIYGLGTFLMVFEYMSSAKDKEEKEAKSKLKKEEEKREMAQALEDINKRLAHLEALERTHNRTHEEDGGADQRKPSPGSGKRPLGLSIQAPSRTTCVGNSTPRESRHPADRGGXXXXXXXXXXXXXXXXXSS------MRGSGGDTDEADGEPNDYLWRQEDEDDGESERGTRGVSPREMLPPT 221
            MGQATN ISARISIR+AGHTTTKIKPLEEDKAIADGG++LAEGFIYGLGT LMVFEYMS+AKDKE KEA SKLKKEEEKRE+AQALEDIN+RLA LEAL+RT NRTHE D GADQR       K PLGL+ QAPSR TCVG+STPRESRHP D+GG                  S      MRGSGGDTDEA+GE NDYLWRQEDE+DGE ERGTRGVSP EML PT
Sbjct:   42 MGQATNRISARISIRLAGHTTTKIKPLEEDKAIADGGNMLAEGFIYGLGTSLMVFEYMSNAKDKEAKEAISKLKKEEEKREIAQALEDINRRLARLEALDRTGNRTHEVDDGADQR-------KWPLGLAFQAPSRKTCVGDSTPRESRHPPDQGGGDASTVGGGAGSRNEHQGSRSGGSGMRGSGGDTDEANGERNDYLWRQEDEEDGEGERGTRGVSPWEMLLPT 261
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BLAST of mRNA_Ecto-sp13_S_contig13159.2563.1 vs. uniprot
Match: A0A835YQK9_9STRA (Optic atrophy 3 protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQK9_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 1.110e-8
Identity = 31/61 (50.82%), Postives = 46/61 (75.41%), Query Frame = 0 
Query:    1 MGQATNSISARISIRMAGHTTTKIKPLEEDKAIADGGDLLAEGFIYGLGTFLMVFEYMSSA 61
            MGQ+++ +S  IS+R AG T + IKPL+E KA+A GGDLL+E FI+ +   L+V++Y +SA
Sbjct:   42 MGQSSHKVSTIISVRAAGFTASNIKPLDESKALAIGGDLLSEIFIFSVAGGLLVWDYNNSA 102
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BLAST of mRNA_Ecto-sp13_S_contig13159.2563.1 vs. uniprot
Match: A0A7S2UM42_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UM42_9STRA)

HSP 1 Score: 53.1 bits (126), Expect = 5.980e-5
Identity = 28/71 (39.44%), Postives = 46/71 (64.79%), Query Frame = 0 
Query:    1 MGQATNSISARISIRMAGHTTTKIKPLEEDKAIADGGDLLAEGFIYGLGTFLMVFEY-MSSAKDKEEKEAK 70
            +GQ T++I++R++I  AG+    I PLE DKA+ +G +LL E  ++ +   L+V+EY  S  K+K  +E K
Sbjct:   43 VGQTTHTITSRMTIWSAGYKVRSITPLEPDKALVNGAELLGEVVVFSVSGVLVVYEYNRSKTKEKXXEEQK 113
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13159.2563.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KLD9_9PHAE6.970e-9774.01Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YQK9_9STRA1.110e-850.82Optic atrophy 3 protein-domain-containing protein ... [more]
A0A7S2UM42_9STRA5.980e-539.44Hypothetical protein n=1 Tax=Attheya septentrional... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 61..99
IPR010754Optic atrophy 3-likePFAMPF07047OPA3coord: 1..80
e-value: 1.6E-15
score: 57.0
IPR010754Optic atrophy 3-likePANTHERPTHR12499OPTIC ATROPHY 3 PROTEIN OPA3coord: 1..106

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13159contigEcto-sp13_S_contig13159:775..2818 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13159.2563.1mRNA_Ecto-sp13_S_contig13159.2563.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13159 228..3082 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13159.2563.1 ID=prot_Ecto-sp13_S_contig13159.2563.1|Name=mRNA_Ecto-sp13_S_contig13159.2563.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=228bp
MGQATNSISARISIRMAGHTTTKIKPLEEDKAIADGGDLLAEGFIYGLGT
FLMVFEYMSSAKDKEEKEAKSKLKKEEEKREMAQALEDINKRLAHLEALE
RTHNRTHEEDGGADQRKPSPGSGKRPLGLSIQAPSRTTCVGNSTPRESRH
PADRGGGGGAGSRNEHQGSGSGGSSMRGSGGDTDEADGEPNDYLWRQEDE
DDGESERGTRGVSPREMLPPTRWISTA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010754OPA3-like