prot_Ecto-sp13_S_contig13150.2562.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13150.2562.1
Unique Nameprot_Ecto-sp13_S_contig13150.2562.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length56
Homology
BLAST of mRNA_Ecto-sp13_S_contig13150.2562.1 vs. uniprot
Match: D7FRQ4_ECTSI (Protein YIPF n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRQ4_ECTSI)

HSP 1 Score: 115 bits (287), Expect = 1.420e-29
Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 0
Query:    1 LRGNLGHVLGFVAVAWCTISATRLFEEYLEMRRQRYLVAYPVGLLYACFVLITVY 55
            LRGNLGHVLGFVAVAWCTISATRLFEEYLEMRRQRYLVAYPVGLLYACFVLITVY
Sbjct:  291 LRGNLGHVLGFVAVAWCTISATRLFEEYLEMRRQRYLVAYPVGLLYACFVLITVY 345          
BLAST of mRNA_Ecto-sp13_S_contig13150.2562.1 vs. uniprot
Match: A0A6H5JG11_9PHAE (Protein YIPF n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG11_9PHAE)

HSP 1 Score: 115 bits (287), Expect = 1.470e-29
Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 0
Query:    1 LRGNLGHVLGFVAVAWCTISATRLFEEYLEMRRQRYLVAYPVGLLYACFVLITVY 55
            LRGNLGHVLGFVAVAWCTISATRLFEEYLEMRRQRYLVAYPVGLLYACFVLITVY
Sbjct:  293 LRGNLGHVLGFVAVAWCTISATRLFEEYLEMRRQRYLVAYPVGLLYACFVLITVY 347          
BLAST of mRNA_Ecto-sp13_S_contig13150.2562.1 vs. uniprot
Match: A0A7S2G127_9STRA (Protein YIPF n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G127_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 1.020e-15
Identity = 32/55 (58.18%), Postives = 45/55 (81.82%), Query Frame = 0
Query:    1 LRGNLGHVLGFVAVAWCTISATRLFEEYLEMRRQRYLVAYPVGLLYACFVLITVY 55
            L G +G+    +AV WCT++ATRLFE+ L M++QR L+AYPVGLLY+CFVL+T++
Sbjct:  219 LSGAVGNAFALLAVVWCTVTATRLFEQALSMKKQRLLIAYPVGLLYSCFVLMTIF 273          
BLAST of mRNA_Ecto-sp13_S_contig13150.2562.1 vs. uniprot
Match: A0A835Z6H4_9STRA (Protein YIPF n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6H4_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 4.180e-14
Identity = 31/55 (56.36%), Postives = 42/55 (76.36%), Query Frame = 0
Query:    1 LRGNLGHVLGFVAVAWCTISATRLFEEYLEMRRQRYLVAYPVGLLYACFVLITVY 55
            L G +G  L   AVAW   +AT+LFE+YL+MR QR+L+AYP+GLLY CFVL+ ++
Sbjct:  171 LSGRVGLALAGAAVAWSCTAATKLFEQYLDMRHQRWLIAYPIGLLYCCFVLMAIF 225          
BLAST of mRNA_Ecto-sp13_S_contig13150.2562.1 vs. uniprot
Match: A0A7S2RUP4_9STRA (Protein YIPF n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RUP4_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 7.110e-14
Identity = 30/55 (54.55%), Postives = 41/55 (74.55%), Query Frame = 0
Query:    1 LRGNLGHVLGFVAVAWCTISATRLFEEYLEMRRQRYLVAYPVGLLYACFVLITVY 55
            +RG  G+ L    V W T++ATR FE+  +MR+QRYL+AYP+GLLY CFVLI ++
Sbjct:   46 MRGWFGNALATGCVGWSTLAATRQFEKLFDMRQQRYLMAYPIGLLYTCFVLIAMF 100          
BLAST of mRNA_Ecto-sp13_S_contig13150.2562.1 vs. uniprot
Match: A0A0G4FG04_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4FG04_VITBC)

HSP 1 Score: 71.6 bits (174), Expect = 9.090e-14
Identity = 33/55 (60.00%), Postives = 40/55 (72.73%), Query Frame = 0
Query:    1 LRGNLGHVLGFVAVAWCTISATRLFEEYLEMRRQRYLVAYPVGLLYACFVLITVY 55
            LRG LG +L  + + WCT +A+R FE  L M  QRYLVAYP+ LLY CFVLITV+
Sbjct:  178 LRGTLGTILSPLCIIWCTATASRFFETALLMHHQRYLVAYPICLLYTCFVLITVF 232          
BLAST of mRNA_Ecto-sp13_S_contig13150.2562.1 vs. uniprot
Match: A0A197JDV0_9FUNG (Protein YIP n=1 Tax=Linnemannia elongata AG-77 TaxID=1314771 RepID=A0A197JDV0_9FUNG)

HSP 1 Score: 68.6 bits (166), Expect = 6.830e-13
Identity = 30/55 (54.55%), Postives = 39/55 (70.91%), Query Frame = 0
Query:    1 LRGNLGHVLGFVAVAWCTISATRLFEEYLEMRRQRYLVAYPVGLLYACFVLITVY 55
            L G LG++L  +A+AWCT S++  F   L M  QR+LVAYPVGL Y CF L+TV+
Sbjct:  134 LNGGLGYILSALAIAWCTYSSSGFFTAVLGMNDQRFLVAYPVGLFYGCFALMTVF 188          
BLAST of mRNA_Ecto-sp13_S_contig13150.2562.1 vs. uniprot
Match: A0A0G4GYC3_9ALVE (Protein YIPF n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4GYC3_9ALVE)

HSP 1 Score: 69.7 bits (169), Expect = 7.160e-13
Identity = 34/55 (61.82%), Postives = 40/55 (72.73%), Query Frame = 0
Query:    1 LRGNLGHVLGFVAVAWCTISATRLFEEYLEMRRQRYLVAYPVGLLYACFVLITVY 55
            LR + G V+  + V WCT +A+R FE  L M  QRYLVAYPV LLYACFVLITV+
Sbjct:  210 LRQSFGLVVAPLCVVWCTATASRFFETALNMTHQRYLVAYPVFLLYACFVLITVF 264          
BLAST of mRNA_Ecto-sp13_S_contig13150.2562.1 vs. uniprot
Match: A0A7S2CK89_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CK89_9STRA)

HSP 1 Score: 67.8 bits (164), Expect = 7.670e-13
Identity = 31/55 (56.36%), Postives = 41/55 (74.55%), Query Frame = 0
Query:    1 LRGNLGHVLGFVAVAWCTISATRLFEEYLEMRRQRYLVAYPVGLLYACFVLITVY 55
            L G +G+ +G  AV W T++ATRLF   L M   R+L+AYPVGLLYACFVL+T++
Sbjct:  104 LTGIIGNFIGAGAVGWSTLTATRLFVMSLNMESARFLIAYPVGLLYACFVLMTIF 158          
BLAST of mRNA_Ecto-sp13_S_contig13150.2562.1 vs. uniprot
Match: A0A7S0DM30_9EUKA (Protein YIPF n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DM30_9EUKA)

HSP 1 Score: 68.2 bits (165), Expect = 8.180e-13
Identity = 31/55 (56.36%), Postives = 40/55 (72.73%), Query Frame = 0
Query:    1 LRGNLGHVLGFVAVAWCTISATRLFEEYLEMRRQRYLVAYPVGLLYACFVLITVY 55
            L+G +G     V + WCT++ATR  E  L+MR QRYLVAYP+ LLY+CF LITV+
Sbjct:  125 LKGYIGFSTTTVTILWCTVAATRFVEATLDMRPQRYLVAYPLMLLYSCFALITVF 179          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13150.2562.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRQ4_ECTSI1.420e-29100.00Protein YIPF n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
A0A6H5JG11_9PHAE1.470e-29100.00Protein YIPF n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A7S2G127_9STRA1.020e-1558.18Protein YIPF n=1 Tax=Dictyocha speculum TaxID=3568... [more]
A0A835Z6H4_9STRA4.180e-1456.36Protein YIPF n=1 Tax=Tribonema minus TaxID=303371 ... [more]
A0A7S2RUP4_9STRA7.110e-1454.55Protein YIPF n=1 Tax=Rhizochromulina marina TaxID=... [more]
A0A0G4FG04_VITBC9.090e-1460.00Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]
A0A197JDV0_9FUNG6.830e-1354.55Protein YIP n=1 Tax=Linnemannia elongata AG-77 Tax... [more]
A0A0G4GYC3_9ALVE7.160e-1361.82Protein YIPF n=1 Tax=Chromera velia CCMP2878 TaxID... [more]
A0A7S2CK89_9STRA7.670e-1356.36Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S0DM30_9EUKA8.180e-1356.36Protein YIPF n=1 Tax=Amorphochlora amoebiformis Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR21236:SF2PROTEIN YIPFcoord: 2..55
NoneNo IPR availablePANTHERPTHR21236GOLGI MEMBRANE PROTEIN YIP1coord: 2..55
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 26..36
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 55..55
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..25
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 37..54
NoneNo IPR availableTMHMMTMhelixcoord: 5..24
NoneNo IPR availableTMHMMTMhelixcoord: 36..54

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13150contigEcto-sp13_S_contig13150:7..174 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13150.2562.1mRNA_Ecto-sp13_S_contig13150.2562.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13150 7..174 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13150.2562.1 ID=prot_Ecto-sp13_S_contig13150.2562.1|Name=mRNA_Ecto-sp13_S_contig13150.2562.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=56bp
LRGNLGHVLGFVAVAWCTISATRLFEEYLEMRRQRYLVAYPVGLLYACFV
LITVY*
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