prot_Ecto-sp13_S_contig13146.2557.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13146.2557.1
Unique Nameprot_Ecto-sp13_S_contig13146.2557.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length97
Homology
BLAST of mRNA_Ecto-sp13_S_contig13146.2557.1 vs. uniprot
Match: D8LGI2_ECTSI (Histone deacetylase superfamily protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGI2_ECTSI)

HSP 1 Score: 194 bits (493), Expect = 2.460e-59
Identity = 93/97 (95.88%), Postives = 96/97 (98.97%), Query Frame = 0
Query:    1 AAHGVERVAVVDIDVHHGNGTQALFEEDPTTFYASTHQGPDFYPGTGFDDITGVQSNIVNVSMGDGEGSGGFRAAYSEKILPALEGFRPGLIVISAG 97
            AAHG+ERVAVVDIDVHHGNGTQALFEEDPTTFYASTHQGP+FYPGTGFDDITGVQSNIVNVSMGDGEGSGGFR AY+EKILPALEGFRPGLIVISAG
Sbjct:   42 AAHGIERVAVVDIDVHHGNGTQALFEEDPTTFYASTHQGPEFYPGTGFDDITGVQSNIVNVSMGDGEGSGGFRTAYTEKILPALEGFRPGLIVISAG 138          
BLAST of mRNA_Ecto-sp13_S_contig13146.2557.1 vs. uniprot
Match: A0A6H5KT92_9PHAE (Hist_deacetyl domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT92_9PHAE)

HSP 1 Score: 187 bits (476), Expect = 8.260e-55
Identity = 92/97 (94.85%), Postives = 93/97 (95.88%), Query Frame = 0
Query:    1 AAHGVERVAVVDIDVHHGNGTQALFEEDPTTFYASTHQGPDFYPGTGFDDITGVQSNIVNVSMGDGEGSGGFRAAYSEKILPALEGFRPGLIVISAG 97
            AAHGVERVAVVDIDVHHGNGTQALFEEDPTT YASTHQGP+FYPGTGFDDITGV SNI NVSMGDGEGS GFRAAYSEKILPALEGFRPGLIVISAG
Sbjct:  256 AAHGVERVAVVDIDVHHGNGTQALFEEDPTTLYASTHQGPNFYPGTGFDDITGVHSNIFNVSMGDGEGSRGFRAAYSEKILPALEGFRPGLIVISAG 352          
BLAST of mRNA_Ecto-sp13_S_contig13146.2557.1 vs. uniprot
Match: A0A522VAA4_9PROT (Histone deacetylase family protein n=1 Tax=Rhodospirillales bacterium TaxID=2026786 RepID=A0A522VAA4_9PROT)

HSP 1 Score: 132 bits (333), Expect = 5.960e-36
Identity = 65/97 (67.01%), Postives = 77/97 (79.38%), Query Frame = 0
Query:    1 AAHGVERVAVVDIDVHHGNGTQALFEEDPTTFYASTHQGPDFYPGTGFDDITGVQSNIVNVSMGDGEGSGGFRAAYSEKILPALEGFRPGLIVISAG 97
            A HG++RVAVVD DVHHGNGTQ L E+DP  FYASTHQ P  YPGTG+ D TGV  N+VNV +  G GS GFRAA++ ++LPALE F+PGLI+ISAG
Sbjct:  149 AVHGIQRVAVVDWDVHHGNGTQHLMEDDPDFFYASTHQSP-LYPGTGWADETGVAGNVVNVPLPPGTGSQGFRAAFATRVLPALEEFQPGLILISAG 244          
BLAST of mRNA_Ecto-sp13_S_contig13146.2557.1 vs. uniprot
Match: UPI001A909BF9 (histone deacetylase family protein n=1 Tax=Sneathiella sedimenti TaxID=2816034 RepID=UPI001A909BF9)

HSP 1 Score: 124 bits (310), Expect = 1.550e-32
Identity = 64/95 (67.37%), Postives = 71/95 (74.74%), Query Frame = 0
Query:    3 HGVERVAVVDIDVHHGNGTQALFEEDPTTFYASTHQGPDFYPGTGFDDITGVQSNIVNVSMGDGEGSGGFRAAYSEKILPALEGFRPGLIVISAG 97
            +G+ER+AVVD DVHHGNGTQA+FE DP  FYASTHQ P FYPGTG    TGV  NIVNV +  G GS  FR AY   ILPALE FRP L++ISAG
Sbjct:  151 YGLERIAVVDFDVHHGNGTQAIFERDPGMFYASTHQAP-FYPGTGDASETGV-GNIVNVPLAAGSGSRAFREAYDTVILPALEAFRPELVIISAG 243          
BLAST of mRNA_Ecto-sp13_S_contig13146.2557.1 vs. uniprot
Match: A0A7U6Y8G6_9PROT (Histone deacetylase superfamily n=1 Tax=Rhodospirillaceae bacterium LM-1 TaxID=2682548 RepID=A0A7U6Y8G6_9PROT)

HSP 1 Score: 124 bits (310), Expect = 1.580e-32
Identity = 61/96 (63.54%), Postives = 74/96 (77.08%), Query Frame = 0
Query:    2 AHGVERVAVVDIDVHHGNGTQALFEEDPTTFYASTHQGPDFYPGTGFDDITGVQSNIVNVSMGDGEGSGGFRAAYSEKILPALEGFRPGLIVISAG 97
            AHG++R+AVVD DVHHGNG+Q L E+DP  FYASTHQ P  YPGTG+ D TGV  N+VNV +  G    GFRAA++ +ILPALE F+P LI+ISAG
Sbjct:  150 AHGLKRIAVVDWDVHHGNGSQHLMEDDPDFFYASTHQSP-LYPGTGWADETGVAGNVVNVPLPPGTDGQGFRAAFANRILPALEAFQPELILISAG 244          
BLAST of mRNA_Ecto-sp13_S_contig13146.2557.1 vs. uniprot
Match: UPI00146E0C3A (histone deacetylase family protein n=1 Tax=Sneathiella limimaris TaxID=1964213 RepID=UPI00146E0C3A)

HSP 1 Score: 123 bits (309), Expect = 2.230e-32
Identity = 58/95 (61.05%), Postives = 72/95 (75.79%), Query Frame = 0
Query:    3 HGVERVAVVDIDVHHGNGTQALFEEDPTTFYASTHQGPDFYPGTGFDDITGVQSNIVNVSMGDGEGSGGFRAAYSEKILPALEGFRPGLIVISAG 97
            +G+ R+AV+D DVHHGNGTQ +FE+DP  FY STHQ P FYPGTG+ + TGV  NIVNV + +G GS  FR AY + +LPALE F P L++ISAG
Sbjct:  151 YGLTRIAVIDFDVHHGNGTQHIFEKDPDLFYGSTHQSPPFYPGTGYANETGV-GNIVNVPLVEGSGSKAFRDAYKDTVLPALESFNPELLIISAG 244          
BLAST of mRNA_Ecto-sp13_S_contig13146.2557.1 vs. uniprot
Match: UPI00200B742A (histone deacetylase family protein n=1 Tax=Roseomonas sp. NAR14 TaxID=2937791 RepID=UPI00200B742A)

HSP 1 Score: 121 bits (303), Expect = 1.770e-31
Identity = 62/97 (63.92%), Postives = 75/97 (77.32%), Query Frame = 0
Query:    1 AAHGVERVAVVDIDVHHGNGTQALFEEDPTTFYASTHQGPDFYPGTGFDDITGVQSNIVNVSMGDGEGSGGFRAAYSEKILPALEGFRPGLIVISAG 97
            AAHG+ RVAVVD DVHHGNGTQA+FE DPT FYAS+HQ P  YPGTG +D TGV  NIVN ++  G     FRAA+++++LPALE F P L+V+SAG
Sbjct:  151 AAHGLGRVAVVDFDVHHGNGTQAIFERDPTLFYASSHQYP-CYPGTGLEDETGV-GNIVNATLPPGATGVEFRAAWADRLLPALEAFAPELLVVSAG 245          
BLAST of mRNA_Ecto-sp13_S_contig13146.2557.1 vs. uniprot
Match: A0A317EBB5_9PROT (Acetoin utilization protein n=1 Tax=Zavarzinia aquatilis TaxID=2211142 RepID=A0A317EBB5_9PROT)

HSP 1 Score: 121 bits (303), Expect = 1.800e-31
Identity = 59/96 (61.46%), Postives = 70/96 (72.92%), Query Frame = 0
Query:    2 AHGVERVAVVDIDVHHGNGTQALFEEDPTTFYASTHQGPDFYPGTGFDDITGVQSNIVNVSMGDGEGSGGFRAAYSEKILPALEGFRPGLIVISAG 97
            AHG+ER+AVVD DVHHGNGTQA+FE+DP  FYASTHQ P  YPGTG    TGV  NIVN  +  G     FR +++E + PALE FRP LI++SAG
Sbjct:  152 AHGLERIAVVDFDVHHGNGTQAMFEKDPGLFYASTHQAP-LYPGTGAAGDTGVADNIVNAPLPPGADGPAFRKSFAEHVFPALEAFRPELILVSAG 246          
BLAST of mRNA_Ecto-sp13_S_contig13146.2557.1 vs. uniprot
Match: A0A521QTH9_9HYPH (Histone deacetylase family protein n=2 Tax=Reyranella TaxID=445219 RepID=A0A521QTH9_9HYPH)

HSP 1 Score: 121 bits (303), Expect = 1.840e-31
Identity = 58/97 (59.79%), Postives = 71/97 (73.20%), Query Frame = 0
Query:    1 AAHGVERVAVVDIDVHHGNGTQALFEEDPTTFYASTHQGPDFYPGTGFDDITGVQSNIVNVSMGDGEGSGGFRAAYSEKILPALEGFRPGLIVISAG 97
            AA  VERVA++D DVHHG GTQA+ E +PT FYASTHQ P  YPGTGF    G+  N+VNV +  G GS  FR A+ E+ILPAL+GF P L+++SAG
Sbjct:  149 AAFAVERVAIIDFDVHHGQGTQAVVEPEPTLFYASTHQYP-LYPGTGFPRERGIAGNVVNVPLAAGSGSAEFRTAWGERILPALDGFAPELVIVSAG 244          
BLAST of mRNA_Ecto-sp13_S_contig13146.2557.1 vs. uniprot
Match: A0A845QC43_9HYPH (Histone deacetylase family protein n=1 Tax=Pyruvatibacter mobilis TaxID=1712261 RepID=A0A845QC43_9HYPH)

HSP 1 Score: 120 bits (301), Expect = 3.430e-31
Identity = 61/97 (62.89%), Postives = 70/97 (72.16%), Query Frame = 0
Query:    1 AAHGVERVAVVDIDVHHGNGTQALFEEDPTTFYASTHQGPDFYPGTGFDDITGVQSNIVNVSMGDGEGSGGFRAAYSEKILPALEGFRPGLIVISAG 97
            A HG+ERVAVVD DVHHGNGT+A F  +PT FYASTHQ P  YPGTG  D+TGV  NI+NV +         RAAY EKILPAL+ F P L++ISAG
Sbjct:  149 AVHGLERVAVVDFDVHHGNGTEAAFFHEPTLFYASTHQHP-LYPGTGAADVTGVADNILNVPLPPHADGAMMRAAYEEKILPALDRFAPQLLIISAG 244          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13146.2557.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LGI2_ECTSI2.460e-5995.88Histone deacetylase superfamily protein n=1 Tax=Ec... [more]
A0A6H5KT92_9PHAE8.260e-5594.85Hist_deacetyl domain-containing protein n=1 Tax=Ec... [more]
A0A522VAA4_9PROT5.960e-3667.01Histone deacetylase family protein n=1 Tax=Rhodosp... [more]
UPI001A909BF91.550e-3267.37histone deacetylase family protein n=1 Tax=Sneathi... [more]
A0A7U6Y8G6_9PROT1.580e-3263.54Histone deacetylase superfamily n=1 Tax=Rhodospiri... [more]
UPI00146E0C3A2.230e-3261.05histone deacetylase family protein n=1 Tax=Sneathi... [more]
UPI00200B742A1.770e-3163.92histone deacetylase family protein n=1 Tax=Roseomo... [more]
A0A317EBB5_9PROT1.800e-3161.46Acetoin utilization protein n=1 Tax=Zavarzinia aqu... [more]
A0A521QTH9_9HYPH1.840e-3159.79Histone deacetylase family protein n=2 Tax=Reyrane... [more]
A0A845QC43_9HYPH3.430e-3162.89Histone deacetylase family protein n=1 Tax=Pyruvat... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000286Histone deacetylase familyPRINTSPR01270HDASUPERcoord: 7..22
score: 61.54
coord: 89..97
score: 35.14
IPR023801Histone deacetylase domainPFAMPF00850Hist_deacetylcoord: 2..97
e-value: 4.7E-27
score: 95.3
IPR037138Histone deacetylase domain superfamilyGENE3D3.40.800.20coord: 1..97
e-value: 4.7E-33
score: 116.6
NoneNo IPR availablePANTHERPTHR45634FAMILY NOT NAMEDcoord: 2..97
IPR023696Ureohydrolase domain superfamilySUPERFAMILY52768Arginase/deacetylasecoord: 3..97

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13146contigEcto-sp13_S_contig13146:3438..4815 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13146.2557.1mRNA_Ecto-sp13_S_contig13146.2557.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13146 3438..4815 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13146.2557.1 ID=prot_Ecto-sp13_S_contig13146.2557.1|Name=mRNA_Ecto-sp13_S_contig13146.2557.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=97bp
AAHGVERVAVVDIDVHHGNGTQALFEEDPTTFYASTHQGPDFYPGTGFDD
ITGVQSNIVNVSMGDGEGSGGFRAAYSEKILPALEGFRPGLIVISAG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000286His_deacetylse
IPR023801His_deacetylse_dom
IPR037138His_deacetylse_dom_sf
IPR023696Ureohydrolase_dom_sf