prot_Ecto-sp13_S_contig13146.2556.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13146.2556.1
Unique Nameprot_Ecto-sp13_S_contig13146.2556.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length179
Homology
BLAST of mRNA_Ecto-sp13_S_contig13146.2556.1 vs. uniprot
Match: A0A6H5KT92_9PHAE (Hist_deacetyl domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT92_9PHAE)

HSP 1 Score: 288 bits (736), Expect = 6.460e-92
Identity = 156/173 (90.17%), Postives = 162/173 (93.64%), Query Frame = 0
Query:    1 LADHPERPGRVRAIMNALTRNYPDITTTLAPEATVEQVLRFHDQPHVDKILRLCSDSEKAGRAAEAXXXXXXXXXXXXXXXXXSPAAARHISPYAGIVQIDPDTAVMPASRAAIFRAAGAACFAVDEVMSGGAANAFCCVRPPGHHAEPDRAMGFCFFNNAPIGALHAKASQA 173
            + DHPERPGRVRAIMNALTRNYPD+TT LAPEATVEQVLRFHD+PH+DKIL+LCSDSEKAGRAAEA XXXXXXXXXX      SPAA RH+SPYAGIVQIDPDTAVMPASRAAIFRAAGAACFAVDEVMSGGAANAFCCVRPPGHHAEPDRAMGFCFFNNAPIGALHAKAS A
Sbjct:   85 IPDHPERPGRVRAIMNALTRNYPDMTTMLAPEATVEQVLRFHDKPHLDKILQLCSDSEKAGRAAEAKXXXXXXXXXXASRRG-SPAADRHVSPYAGIVQIDPDTAVMPASRAAIFRAAGAACFAVDEVMSGGAANAFCCVRPPGHHAEPDRAMGFCFFNNAPIGALHAKASGA 256          
BLAST of mRNA_Ecto-sp13_S_contig13146.2556.1 vs. uniprot
Match: D8LGI1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGI1_ECTSI)

HSP 1 Score: 129 bits (325), Expect = 7.340e-35
Identity = 75/92 (81.52%), Postives = 77/92 (83.70%), Query Frame = 0
Query:   38 VLRFHDQPHVDKILRLCSDSEKAGRAAEAXXXXXXXXXXXXXXXXXSPAAARHISPYAGIVQIDPDTAVMPASRAAIFRAAGAACFAVDEVM 129
            VLRFHDQPHVDKILRLCSDSEKAGRAAEA  XXXXX          SP A RH+SPYAGIVQIDPDTAVMPASRAAIFRAAGAACFAVDE +
Sbjct:   87 VLRFHDQPHVDKILRLCSDSEKAGRAAEAKAXXXXXSRGKGSRRG-SPTADRHVSPYAGIVQIDPDTAVMPASRAAIFRAAGAACFAVDETL 177          
BLAST of mRNA_Ecto-sp13_S_contig13146.2556.1 vs. uniprot
Match: A0A024TBK3_9STRA (Hist_deacetyl domain-containing protein n=3 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TBK3_9STRA)

HSP 1 Score: 132 bits (331), Expect = 5.820e-33
Identity = 73/166 (43.98%), Postives = 95/166 (57.23%), Query Frame = 0
Query:    4 HPERPGRVRAIMNALTRNYPDIT-TTLAPEATVEQVLRFHDQPHVDKILRLCSDSEKAGRAAEAXXXXXXXXXXXXXXXXXSPAAARHISPYAGIVQIDPDTAVMPASRAAIFRAAGAACFAVDEVMSGGAANAFCCVRPPGHHAEPDRAMGFCFFNNAPIGALHA 168
            HPERP RV+ I++ L   +P I   T AP+AT+EQ+  FH   HV+ +L+ C   E++    +                  + AA R +      + ID DT +M  +R A   AAGAAC AVD VM+G   NAFC VRPPGHHAEP +AMGFCFFNN  + A+HA
Sbjct:   72 HPERPERVQVILDRLVDVFPMIPHVTTAPQATLEQLHAFHTPLHVNSVLKWCGKIERSMEELDRLATDSRP----------ASAARRDVLKQYSCLDIDGDTTIMRYTREAALHAAGAACAAVDAVMTGACTNAFCAVRPPGHHAEPHKAMGFCFFNNIGVAAMHA 227          
BLAST of mRNA_Ecto-sp13_S_contig13146.2556.1 vs. uniprot
Match: A0A6G0WA04_9STRA (Hist_deacetyl domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WA04_9STRA)

HSP 1 Score: 124 bits (311), Expect = 2.680e-30
Identity = 73/172 (42.44%), Postives = 93/172 (54.07%), Query Frame = 0
Query:    4 HPERPGRVRAIMNALTRNYPDITT-TLAPEATVEQVLRFHDQPHVDKILRLCSDSEKAGRAAEAXXXXXXXXXXXXXXXXXSPAAARHISPYAGIVQIDPDTAVMPASRAAIFRAAGAACFAVDEVMSGGAANAFCCVRPPGHHAEPDRAMGFCFFNNAPIGALHAKASQAL 174
            HPERP RV+ I+  L   +P +   T AP AT+EQ+  FH   HV  +L+ C+  E++    +                    AA R        ++ID DTA+M  +R A   AAGAAC AVD V+ G   NAFC VRPPGHHAEP +AMGFC FNN  I A+HA  +  L
Sbjct:   57 HPERPERVQVILERLQAVFPWLPHHTDAPPATIEQLQAFHTPMHVQAVLKWCAKIERSMDELDRIAAESSSNH----------AARRETLQQYATIEIDGDTALMRYTREAAVHAAGAACAAVDAVLRGDCLNAFCAVRPPGHHAEPHKAMGFCIFNNIGIAAMHALETHKL 218          
BLAST of mRNA_Ecto-sp13_S_contig13146.2556.1 vs. uniprot
Match: K2JMB2_9PROT (Histone deacetylase-like amidohydrolase n=4 Tax=Oceanibaculum TaxID=659693 RepID=K2JMB2_9PROT)

HSP 1 Score: 120 bits (302), Expect = 4.780e-30
Identity = 74/172 (43.02%), Postives = 85/172 (49.42%), Query Frame = 0
Query:    4 HPERPGRVRAIMNALTR-NYPDITTTLAPEATVEQVLRFHDQPHVDKILRLCSDSEKAGRAAEAXXXXXXXXXXXXXXXXXSPAAARHISPYAGIVQIDPDTAVMPASRAAIFRAAGAACFAVDEVMSGGAANAFCCVRPPGHHAEPDRAMGFCFFNNAPIGALHAKASQAL 174
            HPERP R+RA++ AL    +  +    AP AT EQ+LR H Q HVD                                      A R   P  G+  ID DT V P S  A  R AGA C AVD V+ G A NAFC VRPPGHHAE  RAMGFC FN+A +GA HA+A   L
Sbjct:   20 HPERPDRLRAVLEALDEPRFAGLVRREAPAATEEQLLRAHPQAHVD--------------------------------------AVRAAIPAEGLSGIDADTIVSPQSLEAALRCAGAVCAAVDAVVGGEAENAFCAVRPPGHHAEAARAMGFCLFNSAAVGAYHARAVHGL 153          
BLAST of mRNA_Ecto-sp13_S_contig13146.2556.1 vs. uniprot
Match: W4FDR8_9STRA (Hist_deacetyl domain-containing protein n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FDR8_9STRA)

HSP 1 Score: 124 bits (310), Expect = 5.640e-30
Identity = 73/174 (41.95%), Postives = 98/174 (56.32%), Query Frame = 0
Query:    4 HPERPGRVRAIMNALTRNYPDIT-TTLAPEATVEQVLRFHDQPHVDKILRLCSDSEKAGRAAEAXXXXXXXXXXXXXXXXXSPAAARH--ISPYAGIVQIDPDTAVMPASRAAIFRAAGAACFAVDEVMSGGAANAFCCVRPPGHHAEPDRAMGFCFFNNAPIGALHAKASQAL 174
            HPERP RV+ I++ +   +P +   T  P AT+EQ+  FH   HV+ +L+ C   E++    +                  + AA R   +  Y+ +  ID DT +M  +R A   AAGAAC AVD VM+G  ANAFC VRPPGHHAEP +AMGFCFFNN  + A+HA A   +
Sbjct:   75 HPERPERVQVILDRILNVFPCMPHITTFPAATLEQLHAFHTPLHVNAVLKWCGKIERSMDELDRIATDPR-----------ATAATRRDTLLQYSSL-DIDGDTTIMRYTREAALHAAGAACAAVDAVMTGACANAFCAVRPPGHHAEPHKAMGFCFFNNIGVAAMHAIAGHGV 236          
BLAST of mRNA_Ecto-sp13_S_contig13146.2556.1 vs. uniprot
Match: UPI0013920645 (histone deacetylase family protein n=1 Tax=Pseudoxanthomonas kaohsiungensis TaxID=283923 RepID=UPI0013920645)

HSP 1 Score: 120 bits (300), Expect = 8.510e-30
Identity = 69/173 (39.88%), Postives = 89/173 (51.45%), Query Frame = 0
Query:    3 DHPERPGRVRAIMNALTRNYPDITTTLAPEATVEQVLRFHDQPHVDKILRLCSDSEKAGRAAEAXXXXXXXXXXXXXXXXXSPAAARHISPYAGIVQIDPDTAVMPASRAAIFRAAGAACFAVDEVMSGGAANAFCCVRPPGHHAEPDRAMGFCFFNNAPIGALHAKASQALD 175
            +HPERP R+RA+++AL R YPD+    AP A    +LR H    +D++L                                +P A+       G+ ++DPDTA+ P S  A   AAGA   AVD VM+G A  AFC VRPPGHHA PD AMGFC FNN  + A HA+    L+
Sbjct:   17 EHPERPARLRAVLDALDRAYPDLDWREAPMARRGDLLRVHGDTLIDEVL--------------------------------APVAS-------GLQRLDPDTALSPGSARAALHAAGAGLAAVDAVMAGEAQTAFCAVRPPGHHATPDTAMGFCLFNNIAVAAAHARDHHGLE 150          
BLAST of mRNA_Ecto-sp13_S_contig13146.2556.1 vs. uniprot
Match: A0A7S3PNW0_9STRA (Hypothetical protein n=2 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PNW0_9STRA)

HSP 1 Score: 123 bits (308), Expect = 1.050e-29
Identity = 73/171 (42.69%), Postives = 94/171 (54.97%), Query Frame = 0
Query:    3 DHPERPGRVRAIMNALTRNYPDITTT---LAPEATVEQVLRFHDQPHVDKILRLCSDS-EKAGRAAEAXXXXXXXXXXXXXXXXXSPAAARHISPYAGIVQIDPDTAVMPASRAAIFRAAGAACFAVDEVMSGGAANAFCCVRPPGHHAEPDRAMGFCFFNNAPIGALHAK 169
            +HPE+P R+ AI+N L + Y   TT     A     E++ RFH++ H+DK+ RL   S EKA RA                    +    R     A  + ID DT++M  +  A   AAG+A  AVD+VM G   NAFC VRPPGHHAE  +AMGFCFFNNA I A+HA+
Sbjct:   62 EHPEQPARITAILNVLKKEYASSTTLGWKKARRVRREEIERFHNKNHIDKLFRLFERSQEKAARAGLNDFKPQISDDKISKSPRNTKRKDRKNMNTADRIVIDEDTSIMRFTEEAALFAAGSAVQAVDDVMKGQTVNAFCVVRPPGHHAERSKAMGFCFFNNAAIAAVHAR 232          
BLAST of mRNA_Ecto-sp13_S_contig13146.2556.1 vs. uniprot
Match: A0A067CI66_SAPPC (Hist_deacetyl domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CI66_SAPPC)

HSP 1 Score: 122 bits (305), Expect = 1.300e-29
Identity = 68/172 (39.53%), Postives = 92/172 (53.49%), Query Frame = 0
Query:    4 HPERPGRVRAIMNALTRNYPDITT-TLAPEATVEQVLRFHDQPHVDKILRLCSDSEKAGRAAEAXXXXXXXXXXXXXXXXXSPAAARHISPYAGIVQIDPDTAVMPASRAAIFRAAGAACFAVDEVMSGGAANAFCCVRPPGHHAEPDRAMGFCFFNNAPIGALHAKASQAL 174
            HPERP RV+ +++ L  ++P +   T +P ATVEQ+ RFH   HV  +L+ C   E+     +                       R++      V +D DT +M  +R A  +AAGA    VD V+SG   NAFC VRPPGHHAEP +AMGFC+FNN  + A+HA A   L
Sbjct:   29 HPERPERVQVVLDQLATSFPTLPHWTASPAATVEQLERFHTSSHVQSVLQWCGKIERCMVELDTLRESDETQER------------RNVLKSFENVDVDADTTLMRYTREAALKAAGATIAGVDAVLSGDFTNAFCAVRPPGHHAEPFKAMGFCYFNNVGVAAMHAVAQHGL 188          
BLAST of mRNA_Ecto-sp13_S_contig13146.2556.1 vs. uniprot
Match: A0A485LMG3_9STRA (Aste57867_22690 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LMG3_9STRA)

HSP 1 Score: 122 bits (305), Expect = 2.590e-29
Identity = 68/172 (39.53%), Postives = 95/172 (55.23%), Query Frame = 0
Query:    4 HPERPGRVRAIMNALTRNYPDIT-TTLAPEATVEQVLRFHDQPHVDKILRLCSDSEKAGRAAEAXXXXXXXXXXXXXXXXXSPAAARHISPYAGIVQIDPDTAVMPASRAAIFRAAGAACFAVDEVMSGGAANAFCCVRPPGHHAEPDRAMGFCFFNNAPIGALHAKASQAL 174
            HPERP RV+ I++ +   +P++   T AP AT+EQ+  FH   HV+ +L+ C+  E++    +                  + AA R        + ID DTA+M  +R A   AAG AC AVD V+ G   NAFC +RPPGHHAEP ++MGFC FNN  + A+HA  +  L
Sbjct:   89 HPERPERVQTILDRMAAVFPELPHRTDAPAATLEQLHAFHTSMHVNAVLKWCAKIERSMAELDRLDKTP------------ATAARRETLMQYTTLDIDGDTALMRYTREAALHAAGTACTAVDAVLRGDCTNAFCAIRPPGHHAEPFKSMGFCIFNNVGVAAMHAVQTHGL 248          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13146.2556.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KT92_9PHAE6.460e-9290.17Hist_deacetyl domain-containing protein n=1 Tax=Ec... [more]
D8LGI1_ECTSI7.340e-3581.52Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A024TBK3_9STRA5.820e-3343.98Hist_deacetyl domain-containing protein n=3 Tax=Ap... [more]
A0A6G0WA04_9STRA2.680e-3042.44Hist_deacetyl domain-containing protein n=1 Tax=Ap... [more]
K2JMB2_9PROT4.780e-3043.02Histone deacetylase-like amidohydrolase n=4 Tax=Oc... [more]
W4FDR8_9STRA5.640e-3041.95Hist_deacetyl domain-containing protein n=5 Tax=Ap... [more]
UPI00139206458.510e-3039.88histone deacetylase family protein n=1 Tax=Pseudox... [more]
A0A7S3PNW0_9STRA1.050e-2942.69Hypothetical protein n=2 Tax=Aplanochytrium stocch... [more]
A0A067CI66_SAPPC1.300e-2939.53Hist_deacetyl domain-containing protein n=2 Tax=Sa... [more]
A0A485LMG3_9STRA2.590e-2939.53Aste57867_22690 protein n=1 Tax=Aphanomyces stella... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023801Histone deacetylase domainPFAMPF00850Hist_deacetylcoord: 4..171
e-value: 4.0E-30
score: 105.3
IPR037138Histone deacetylase domain superfamilyGENE3D3.40.800.20coord: 1..176
e-value: 3.0E-33
score: 117.5
NoneNo IPR availablePANTHERPTHR45634FAMILY NOT NAMEDcoord: 4..172
IPR023696Ureohydrolase domain superfamilySUPERFAMILY52768Arginase/deacetylasecoord: 3..171

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13146contigEcto-sp13_S_contig13146:1601..2753 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13146.2556.1mRNA_Ecto-sp13_S_contig13146.2556.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13146 1601..2753 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13146.2556.1 ID=prot_Ecto-sp13_S_contig13146.2556.1|Name=mRNA_Ecto-sp13_S_contig13146.2556.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=179bp
LADHPERPGRVRAIMNALTRNYPDITTTLAPEATVEQVLRFHDQPHVDKI
LRLCSDSEKAGRAAEAKASASASSSKGKGSGRGSPAAARHISPYAGIVQI
DPDTAVMPASRAAIFRAAGAACFAVDEVMSGGAANAFCCVRPPGHHAEPD
RAMGFCFFNNAPIGALHAKASQALDTSK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023801His_deacetylse_dom
IPR037138His_deacetylse_dom_sf
IPR023696Ureohydrolase_dom_sf