prot_Ecto-sp13_S_contig13143.2555.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13143.2555.1
Unique Nameprot_Ecto-sp13_S_contig13143.2555.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length213
Homology
BLAST of mRNA_Ecto-sp13_S_contig13143.2555.1 vs. uniprot
Match: D8LT18_ECTSI (Valine--tRNA ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT18_ECTSI)

HSP 1 Score: 407 bits (1046), Expect = 1.460e-132
Identity = 203/213 (95.31%), Postives = 209/213 (98.12%), Query Frame = 0
Query:    1 RFGDATQVAYSFWLYDLCDYYLELIKPVVGDTSEGNKETRSIAQSCLYLCLDYGLKLIHPIMPFVTEELWQRLPGRGSMGPQEAPSIMVAPYPQADERFANPAAETDMSAVKAAIHAGRSLRSSYGIVPSAKAEFYVKSSSEERHNVITKQASDFITLAKASTAVPIMNEEPPEGCAVHIIDDQSQVYVQLRGLVNFDVEIKKLQKQVTTYTE 213
            +FGDATQVAYSFWLYDLCDYYLELIKPVVGDTSEGNK+ RSIAQSCLYLCLDYGLKLIHPIMPFVTEELWQRLPGRGSMGP+EAPSIMVAPYPQADERFANPAAETDMSAVKAAIHAGRSLRSSYGIVPSAKAEFYVKSSSEERHNVITKQASDFITLAKASTAVPIMNEEPPEGCAVHIIDDQSQVYVQLRG+V+FDVEIKKLQKQ+ T  E
Sbjct:  807 KFGDATQVAYSFWLYDLCDYYLELIKPVVGDTSEGNKKARSIAQSCLYLCLDYGLKLIHPIMPFVTEELWQRLPGRGSMGPEEAPSIMVAPYPQADERFANPAAETDMSAVKAAIHAGRSLRSSYGIVPSAKAEFYVKSSSEERHNVITKQASDFITLAKASTAVPIMNEEPPEGCAVHIIDDQSQVYVQLRGMVDFDVEIKKLQKQLDTKIE 1019          
BLAST of mRNA_Ecto-sp13_S_contig13143.2555.1 vs. uniprot
Match: A0A6V1PAS2_HETAK (Valine--tRNA ligase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1PAS2_HETAK)

HSP 1 Score: 236 bits (601), Expect = 2.280e-68
Identity = 119/209 (56.94%), Postives = 148/209 (70.81%), Query Frame = 0
Query:    2 FGDATQVAYSFWLYDLCDYYLELIKPVVGDTSEGNKETRSIAQSCLYLCLDYGLKLIHPIMPFVTEELWQRLPGRGSMGPQEAPSIMVAPYPQADERFANPAAETDMSAVKAAIHAGRSLRSSYGIVPSAKAEFYVKSSSEERHNVITKQASDFITLAKAS--TAVPIMNEEPPEGCAVHIIDDQSQVYVQLRGLVNFDVEIKKLQKQV 208
            F D T   Y+FWLYDLCD YLELIKPVV D +E N+  R  AQ+ L++CL+ GL+L+HP+MPFVTEELWQRLPGRG +G  E PSIMVAPYP A   +ANPA E     +K AIHA RSLR+ YG+ P    +FYV   S E ++ I+ QASD  TLAKA+  T +P   +EPP GCAV+I  D  QV++ LRGLVNF+ E+ KL+ Q+
Sbjct:  826 FADLTTACYAFWLYDLCDNYLELIKPVVNDAAEANRAARQAAQATLFVCLETGLRLLHPVMPFVTEELWQRLPGRGQLGADEPPSIMVAPYPVARPAWANPALEASYEQIKEAIHACRSLRADYGLTPKQTPDFYVACGSSELYDAISLQASDIRTLAKANQVTVLPA-GQEPPAGCAVNIKSDTLQVHILLRGLVNFEEEVAKLEAQL 1033          
BLAST of mRNA_Ecto-sp13_S_contig13143.2555.1 vs. uniprot
Match: A0A835ZF04_9STRA (Valine--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF04_9STRA)

HSP 1 Score: 227 bits (579), Expect = 2.340e-65
Identity = 119/210 (56.67%), Postives = 141/210 (67.14%), Query Frame = 0
Query:    2 FGDATQVAYSFWLYDLCDYYLELIKPVVGDTSEGNKETRSIAQSCLYLCLDYGLKLIHPIMPFVTEELWQRLPGRGSMGPQEAPSIMVAPYPQADERFANPAAETDMSAVKAAIHAGRSLRSSYGIVPSAKAEFYVKSSSEERHNVITKQASDFITLAKASTA-VPIMNEEPPEGCAVHIIDDQSQVYVQLRGLVNFDVEIKKLQKQVTT 210
            FG  T   Y FWLY+LCD+YLELIKPVV D SE N E R IAQ CLYLCLD+GL+L+HPIMPFVTE+LWQRLPGRGSMG  E+ SIM+A YP+A     +P AE     VK AIH  RSLR++YG+ P                     QA DF TLAKA+   V + NEEPP GCAV I+D+   +YVQL+GLV+FD EI KL+ Q+ T
Sbjct:  830 FGGLTTCLYQFWLYELCDHYLELIKPVVNDKSEANAEARKIAQGCLYLCLDFGLRLLHPIMPFVTEDLWQRLPGRGSMGEGESVSIMLAKYPEAMPAMDDPEAERRYEMVKTAIHTARSLRATYGLTP---------------------QADDFSTLAKAADCGVLVGNEEPPAGCAVQIVDNTLSLYVQLKGLVDFDAEIAKLEGQLET 1018          
BLAST of mRNA_Ecto-sp13_S_contig13143.2555.1 vs. uniprot
Match: K3WUG3_GLOUD (Valine--tRNA ligase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WUG3_GLOUD)

HSP 1 Score: 209 bits (533), Expect = 1.310e-64
Identity = 107/209 (51.20%), Postives = 146/209 (69.86%), Query Frame = 0
Query:    1 RFGDATQVAYSFWLYDLCDYYLELIKPV-VGDTSEGNKETRSIAQSCLYLCLDYGLKLIHPIMPFVTEELWQRLPGRGSMGPQEAPSIMVAPYPQADERFANPAAETDMSAVKAAIHAGRSLRSSYGIVPSAKAEFYVKSSSEERHNVITKQASDFITLAKASTAVPIMNEEPPEGCAVHIIDDQSQVYVQLRGLVNFDVEIKKLQKQV 208
             FGD T   Y+FWLYDLCD YLEL KPV  GD +E     ++ AQ  LY+CL+YGL+L+HP+MPFVTEELWQRLPG+ ++      SI +A YP A + ++NP AE +M  VK  IHA RS+R+ YG+V S + +FYVK S ++   VI  Q  DF TLAKA  +  ++ EEPP+GCA+H ++++ Q++V L GLV+F  EI KL+K++
Sbjct:   12 EFGDLTNALYNFWLYDLCDVYLELAKPVFAGDDAEA----KATAQQVLYICLEYGLRLLHPMMPFVTEELWQRLPGKHAVA-----SITIASYPLAVDGWSNPEAEANMELVKEVIHAARSVRAEYGLVNSVRPQFYVKCSDDDVKRVIDAQLDDFGTLAKAGESHVLVGEEPPKGCAMHSVNEKIQIHVLLAGLVDFANEIAKLEKKM 211          
BLAST of mRNA_Ecto-sp13_S_contig13143.2555.1 vs. uniprot
Match: A0A8K1CK90_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CK90_PYTOL)

HSP 1 Score: 216 bits (549), Expect = 3.070e-61
Identity = 107/208 (51.44%), Postives = 146/208 (70.19%), Query Frame = 0
Query:    2 FGDATQVAYSFWLYDLCDYYLELIKPVVGDTSEGNKETRSIAQSCLYLCLDYGLKLIHPIMPFVTEELWQRLPGRGSMGPQEAPSIMVAPYPQADERFANPAAETDMSAVKAAIHAGRSLRSSYGIVPSAKAEFYVKSSSEERHNVITKQASDFITLAKASTAVPIMNEEPPEGCAVHIIDDQSQVYVQLRGLVNFDVEIKKLQKQVT 209
            FGD T   Y+FWLYDLCD YLEL KPV+G + E  K T   AQ  LY+CL++GL+L+HP+MPFVTEELWQRLPG+ S     APSI VA YP A + ++NP  E  M  +K  IHA RS+R+ YG+V S + +F++K +  E   +I  Q  DF TLAKA  +  +++EEPP+GCA+H ++++ Q++V L GLV+F  EI KL+K++T
Sbjct:  814 FGDLTTALYNFWLYDLCDVYLELAKPVMGGSDEKAKLT---AQQTLYICLEFGLRLLHPLMPFVTEELWQRLPGKRS-----APSITVAQYPLAVDGWSNPEVEAKMELIKEVIHAARSVRAEYGLVNSVRPQFFIKCADAEVQQIIDTQLDDFSTLAKAGESKTLLDEEPPKGCAIHSVNEKVQIHVLLAGLVDFANEISKLEKKLT 1013          
BLAST of mRNA_Ecto-sp13_S_contig13143.2555.1 vs. uniprot
Match: A0A662WQI8_9STRA (Valine--tRNA ligase (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WQI8_9STRA)

HSP 1 Score: 201 bits (512), Expect = 1.700e-60
Identity = 102/209 (48.80%), Postives = 140/209 (66.99%), Query Frame = 0
Query:    1 RFGDATQVAYSFWLYDLCDYYLELIKPVVGDTSEGNKETRSIAQSCLYLCLDYGLKLIHPIMPFVTEELWQRLPGRGSMGPQEAPSIMVAPYPQADERFANPAAETDMSAVKAAIHAGRSLRSSYGIVPSAKAEFYVKSSSEERHNVITKQASDFITLAKASTAVPIMNEEPPEGCAVHIIDDQSQVYVQLRGLVNFDVEIKKLQKQVT 209
             FG+ T   Y+FWLYDLCD YLEL KPV+       K T   AQ  LY+CL++GL+L+HP MPFVTEELWQRLPG+ +       SI +APYP A   + NP AE +M  VK  IHA RS+R+ YG+  S + +F++K S  E   V+  Q  DF TLAKA  +  +++E+PP+GCA+H ++D+ Q++V L GLV+F  EI KL+K+++
Sbjct:   87 EFGELTNALYTFWLYDLCDVYLELTKPVMSGDDAAAKLT---AQQTLYVCLEFGLRLLHPTMPFVTEELWQRLPGKRATA-----SITIAPYPLAVAGWTNPEAEANMELVKEVIHAARSVRAEYGLANSVRPQFFLKCSDAEVRAVMEAQLDDFSTLAKAGDSRCVVDEQPPQGCAMHSVNDKVQLFVLLAGLVDFASEIAKLEKKLS 287          
BLAST of mRNA_Ecto-sp13_S_contig13143.2555.1 vs. uniprot
Match: UPI001EC3C07D (Uncharacterized protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=UPI001EC3C07D)

HSP 1 Score: 213 bits (541), Expect = 3.630e-60
Identity = 106/209 (50.72%), Postives = 144/209 (68.90%), Query Frame = 0
Query:    1 RFGDATQVAYSFWLYDLCDYYLELIKPVVGDTSEGNKETRSIAQSCLYLCLDYGLKLIHPIMPFVTEELWQRLPGRGSMGPQEAPSIMVAPYPQADERFANPAAETDMSAVKAAIHAGRSLRSSYGIVPSAKAEFYVKSSSEERHNVITKQASDFITLAKASTAVPIMNEEPPEGCAVHIIDDQSQVYVQLRGLVNFDVEIKKLQKQVT 209
             FG+ T   Y+FWLYDLCD YLEL+KPV+G   E   E +  AQ  LY+CL++GL+L+HP MPFVTEELWQRLPG+ S       SI +APYP   E ++NP  ET+M  VK  IHA RS+R+ YG+  S + +F++K S +E   V+  Q  DF TLAKA  +  I++EE P+GCA+H ++D+ Q++V L GLV+F  EI KL+K++T
Sbjct:  797 EFGELTNALYTFWLYDLCDVYLELLKPVIGGDDE---EAKLTAQQTLYICLEFGLRLLHPTMPFVTEELWQRLPGKRSTA-----SITIAPYPLPMEGWSNPEVETNMELVKDVIHAARSVRAEYGLANSVRPQFFIKCSDDEVKAVMEAQLDDFSTLAKAGDSKCIVSEEAPQGCAMHSVNDKVQIFVLLAGLVDFANEISKLEKKLT 997          
BLAST of mRNA_Ecto-sp13_S_contig13143.2555.1 vs. uniprot
Match: A0A5D6Y5N2_9STRA (Valine--tRNA ligase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y5N2_9STRA)

HSP 1 Score: 212 bits (539), Expect = 7.300e-60
Identity = 108/207 (52.17%), Postives = 142/207 (68.60%), Query Frame = 0
Query:    2 FGDATQVAYSFWLYDLCDYYLELIKPVVGDTSEGNKETRSIAQSCLYLCLDYGLKLIHPIMPFVTEELWQRLPGRGSMGPQEAPSIMVAPYPQADERFANPAAETDMSAVKAAIHAGRSLRSSYGIVPSAKAEFYVKSSSEERHNVITKQASDFITLAKASTAVPIMNEEPPEGCAVHIIDDQSQVYVQLRGLVNFDVEIKKLQKQV 208
            FG+ T V Y+FWLYDLCD YLEL KPV+      ++  +  AQ  LY+CL+YGL+L+HP+MPFVTEELWQRLPG      + A SI V  YPQ    + NPAAE DM  VK AIHA RS+R++YG+V S + EF++K S      V+  Q  DF TLAKA  A  +++ EPP+GCAVH ++++ Q+YVQL GLV+   EI KL+K++
Sbjct:  817 FGELTNVLYAFWLYDLCDVYLELTKPVLA-ADAADQAAKRTAQQTLYVCLEYGLRLLHPLMPFVTEELWQRLPGA-----RAAASITVVAYPQPVAAWRNPAAEADMELVKDAIHAARSVRAAYGLVNSVRPEFFIKCSDAAVERVVAAQLDDFCTLAKAGDARTLVDAEPPKGCAVHSVNEKLQLYVQLAGLVDAASEISKLEKKL 1017          
BLAST of mRNA_Ecto-sp13_S_contig13143.2555.1 vs. uniprot
Match: A0A7S1CWB1_CYCTE (Valine--tRNA ligase (Fragment) n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1CWB1_CYCTE)

HSP 1 Score: 197 bits (502), Expect = 7.450e-58
Identity = 105/208 (50.48%), Postives = 134/208 (64.42%), Query Frame = 0
Query:    1 RFGDATQVAYSFWLYDLCDYYLELIKPVVGDTSEGNKETRSIAQSCLYLCLDYGLKLIHPIMPFVTEELWQRLPGRGSMGPQEAPSIMVAPYPQADERFANPAAETDMSAVKAAIHAGRSLRSSYGIVPSAKAEFYVKSSSEERHNVITKQASDFITLAKASTAVPIMNEEPPEGCAVHIIDDQSQVYVQLRGLVNFDVEIKKLQKQV 208
            RFGDA   +YS W+ DLCD YLEL+KPVV DTSE NK++R  AQS L++ L+ GL+L+HP+MPFVTEELWQRLPGRG++G  E  SIM+APYP+  E + +  +E  M      I A RSLRSSY I      +FY+K  S E    I     D  TL KAS  V I     P+   + +ID+Q+ V + L GLV+F  EIKKL+K +
Sbjct:  187 RFGDAQNASYSLWINDLCDVYLELVKPVVYDTSEANKDSRLAAQSTLWVALEMGLRLLHPMMPFVTEELWQRLPGRGTLGEDEPQSIMLAPYPECIEAYKSRKSEDAMGVALKVIKACRSLRSSYNITNKVLTQFYLKVESAEDVTAIESHVDDVKTLGKAS-GVAINASNVPQSVGIVVIDNQTTVMMDLAGLVDFKAEIKKLEKSL 393          
BLAST of mRNA_Ecto-sp13_S_contig13143.2555.1 vs. uniprot
Match: A0A2P4YHM1_9STRA (Valine--tRNA ligase n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YHM1_9STRA)

HSP 1 Score: 200 bits (509), Expect = 2.780e-57
Identity = 102/209 (48.80%), Postives = 139/209 (66.51%), Query Frame = 0
Query:    1 RFGDATQVAYSFWLYDLCDYYLELIKPVVGDTSEGNKETRSIAQSCLYLCLDYGLKLIHPIMPFVTEELWQRLPGRGSMGPQEAPSIMVAPYPQADERFANPAAETDMSAVKAAIHAGRSLRSSYGIVPSAKAEFYVKSSSEERHNVITKQASDFITLAKASTAVPIMNEEPPEGCAVHIIDDQSQVYVQLRGLVNFDVEIKKLQKQVT 209
             FG+ T   Y+FWLYDLCD YLEL KPV+   S  + E +  AQ  LY+CL++GL+L+HP MPFVTEELWQRLPG+ S       SI +APYP   E + NP  E +M  VK  IHA RS+R+ YG+  + +  F++K S  +   V+  Q  DF TLAKA  +  I++EE P+GCA+H ++D+ Q++V L GLV+F  EI KL+K++T
Sbjct:  381 EFGELTNALYNFWLYDLCDVYLELTKPVI---SGEDAEAKLTAQQTLYVCLEFGLRLLHPTMPFVTEELWQRLPGKRSTA-----SITIAPYPLPMEGWTNPEIEANMELVKEVIHAARSVRAEYGLANNVRPNFFIKCSDNDVKAVMEAQLDDFNTLAKAGDSKCIVDEEAPQGCAMHSVNDKVQIFVLLAGLVDFANEIAKLEKKLT 581          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13143.2555.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LT18_ECTSI1.460e-13295.31Valine--tRNA ligase n=1 Tax=Ectocarpus siliculosus... [more]
A0A6V1PAS2_HETAK2.280e-6856.94Valine--tRNA ligase n=1 Tax=Heterosigma akashiwo T... [more]
A0A835ZF04_9STRA2.340e-6556.67Valine--tRNA ligase n=1 Tax=Tribonema minus TaxID=... [more]
K3WUG3_GLOUD1.310e-6451.20Valine--tRNA ligase n=1 Tax=Globisporangium ultimu... [more]
A0A8K1CK90_PYTOL3.070e-6151.44Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A662WQI8_9STRA1.700e-6048.80Valine--tRNA ligase (Fragment) n=1 Tax=Nothophytop... [more]
UPI001EC3C07D3.630e-6050.72Uncharacterized protein n=1 Tax=Phytophthora kerno... [more]
A0A5D6Y5N2_9STRA7.300e-6052.17Valine--tRNA ligase n=1 Tax=Pythium brassicum TaxI... [more]
A0A7S1CWB1_CYCTE7.450e-5850.48Valine--tRNA ligase (Fragment) n=1 Tax=Cyclophora ... [more]
A0A2P4YHM1_9STRA2.780e-5748.80Valine--tRNA ligase n=1 Tax=Phytophthora palmivora... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013155Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-bindingPFAMPF08264Anticodon_1coord: 1..136
e-value: 2.5E-32
score: 112.0
NoneNo IPR availableGENE3D1.10.730.10coord: 1..127
e-value: 3.3E-34
score: 120.1
NoneNo IPR availablePANTHERPTHR11946VALYL-TRNA SYNTHETASEScoord: 1..209
NoneNo IPR availablePANTHERPTHR11946:SF109VALYL-TRNA SYNTHETASE, ISOFORM Ccoord: 1..209
IPR009080Aminoacyl-tRNA synthetase, class Ia, anticodon-bindingSUPERFAMILY47323Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasescoord: 1..208

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13143contigEcto-sp13_S_contig13143:427..4792 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13143.2555.1mRNA_Ecto-sp13_S_contig13143.2555.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13143 427..4792 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13143.2555.1 ID=prot_Ecto-sp13_S_contig13143.2555.1|Name=mRNA_Ecto-sp13_S_contig13143.2555.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=213bp
RFGDATQVAYSFWLYDLCDYYLELIKPVVGDTSEGNKETRSIAQSCLYLC
LDYGLKLIHPIMPFVTEELWQRLPGRGSMGPQEAPSIMVAPYPQADERFA
NPAAETDMSAVKAAIHAGRSLRSSYGIVPSAKAEFYVKSSSEERHNVITK
QASDFITLAKASTAVPIMNEEPPEGCAVHIIDDQSQVYVQLRGLVNFDVE
IKKLQKQVTTYTE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013155M/V/L/I-tRNA-synth_anticd-bd
IPR009080tRNAsynth_Ia_anticodon-bd