mRNA_Ecto-sp13_S_contig13135.2551.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig13135.2551.1 vs. uniprot
Match: A0A6H5JI70_9PHAE (5'-nucleotidase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI70_9PHAE) HSP 1 Score: 116 bits (290), Expect = 1.020e-27 Identity = 59/63 (93.65%), Postives = 60/63 (95.24%), Query Frame = 1
Query: 1 LGDSLGDLNMAKGLSAEETLTVGFLNDKVEERMDAYLKAYDVVILGDGSFDFVFELLEEVASK 189
LGDSLGDLNMAKGL AEETLTVGFLNDKVEER DAYLKAYDVVILGDGSFDFV ELLE+VASK
Sbjct: 238 LGDSLGDLNMAKGLRAEETLTVGFLNDKVEERADAYLKAYDVVILGDGSFDFVLELLEQVASK 300
BLAST of mRNA_Ecto-sp13_S_contig13135.2551.1 vs. uniprot
Match: D8LDF4_ECTSI (5'-nucleotidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDF4_ECTSI) HSP 1 Score: 114 bits (286), Expect = 1.940e-27 Identity = 57/63 (90.48%), Postives = 59/63 (93.65%), Query Frame = 1
Query: 1 LGDSLGDLNMAKGLSAEETLTVGFLNDKVEERMDAYLKAYDVVILGDGSFDFVFELLEEVASK 189
LGDSLGDLNMAKGLSAEE LTVGFLNDK+EER DAYLKAYDV+ILGDG FDFV ELLEEVASK
Sbjct: 204 LGDSLGDLNMAKGLSAEEILTVGFLNDKIEERTDAYLKAYDVIILGDGGFDFVLELLEEVASK 266
BLAST of mRNA_Ecto-sp13_S_contig13135.2551.1 vs. uniprot
Match: A0A0D2U9Z3_CAPO3 (5'-nucleotidase n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2U9Z3_CAPO3) HSP 1 Score: 80.1 bits (196), Expect = 6.610e-14 Identity = 36/64 (56.25%), Postives = 50/64 (78.12%), Query Frame = 1
Query: 1 LGDSLGDLNMAKGLSAEETLTVGFLNDKVEERMDAYLKAYDVVILGDGSFDFVFELLEEVASKD 192
LGDSLGDL M++G+ + LT+GFLNDKV ER+++Y +A+DVVILGDGS D V+ L+ + S +
Sbjct: 323 LGDSLGDLQMSRGVDVDNILTIGFLNDKVAERLESYKQAFDVVILGDGSVDLVYNLISMIISGE 386
BLAST of mRNA_Ecto-sp13_S_contig13135.2551.1 vs. uniprot
Match: UPI0001FE3700 (5'-nucleotidase n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=UPI0001FE3700) HSP 1 Score: 80.1 bits (196), Expect = 7.620e-14 Identity = 36/64 (56.25%), Postives = 50/64 (78.12%), Query Frame = 1
Query: 1 LGDSLGDLNMAKGLSAEETLTVGFLNDKVEERMDAYLKAYDVVILGDGSFDFVFELLEEVASKD 192
LGDSLGDL M++G+ + LT+GFLNDKV ER+++Y +A+DVVILGDGS D V+ L+ + S +
Sbjct: 360 LGDSLGDLQMSRGVDVDNILTIGFLNDKVAERLESYKQAFDVVILGDGSVDLVYNLISMIISGE 423
BLAST of mRNA_Ecto-sp13_S_contig13135.2551.1 vs. uniprot
Match: A0A835YMP4_9STRA (5'-nucleotidase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMP4_9STRA) HSP 1 Score: 70.9 bits (172), Expect = 5.000e-11 Identity = 35/61 (57.38%), Postives = 45/61 (73.77%), Query Frame = 1
Query: 1 LGDSLGDLNMAKGLSAEETLTVGFLNDKVEERMDAYLKAYDVVILG-DGSFDFVFELLEEV 180
LGDSLGDL MA GL A+E L+VGFLND+ EER+ +YL YDVVI+G D + +L+ E+
Sbjct: 210 LGDSLGDLQMASGLEADEVLSVGFLNDQAEERIGSYLAGYDVVIIGPDAGLQYALDLVREL 270
BLAST of mRNA_Ecto-sp13_S_contig13135.2551.1 vs. uniprot
Match: A0A196SGZ3_BLAHN (5'-nucleotidase n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196SGZ3_BLAHN) HSP 1 Score: 70.1 bits (170), Expect = 1.400e-10 Identity = 28/67 (41.79%), Postives = 48/67 (71.64%), Query Frame = 1
Query: 1 LGDSLGDLNMAKGLSAEETLTVGFLNDKVEERMDAYLKAYDVVILGDGSFDFVFELLEEVASKDTFK 201
+GD++GD++M+ G++ + +++G LNDKVEERM++Y K +DVVI D FV EL++ + +D +
Sbjct: 229 IGDNIGDIHMSDGVAFQNQISIGLLNDKVEERMESYKKTFDVVICNDSDLSFVVELVKYIVEEDDYS 295
BLAST of mRNA_Ecto-sp13_S_contig13135.2551.1 vs. uniprot
Match: UPI0007112D4D (7-methylguanosine phosphate-specific 5 n=1 Tax=Blastocystis sp. subtype 4 TaxID=944170 RepID=UPI0007112D4D) HSP 1 Score: 69.7 bits (169), Expect = 1.900e-10 Identity = 28/66 (42.42%), Postives = 46/66 (69.70%), Query Frame = 1
Query: 1 LGDSLGDLNMAKGLSAEETLTVGFLNDKVEERMDAYLKAYDVVILGDGSFDFVFELLEEVASKDTF 198
+GD+LGD+ M+ G++ + + +G LNDKV+ERMDAY +DVVI D FV+++++ + +D F
Sbjct: 229 IGDNLGDIRMSDGVAYQNQIAIGLLNDKVQERMDAYKSTFDVVICNDSDLKFVYDIVKYIVEEDDF 294
BLAST of mRNA_Ecto-sp13_S_contig13135.2551.1 vs. uniprot
Match: UPI001FAD017B (7-methylguanosine phosphate-specific 5'-nucleotidase-like isoform X1 n=2 Tax=Girardinichthys multiradiatus TaxID=208333 RepID=UPI001FAD017B) HSP 1 Score: 69.3 bits (168), Expect = 2.740e-10 Identity = 34/65 (52.31%), Postives = 48/65 (73.85%), Query Frame = 1
Query: 1 LGDSLGDLNMAKGLS-AEETLTVGFLNDKVEERMDAYLKAYDVVILGDGSFDFVFELLEEVASKD 192
LGDSLGDLNMA G+S A+ LTVGFLND+VEER ++Y+ ++D+V+L D + D +L + S +
Sbjct: 251 LGDSLGDLNMADGVSEAQNILTVGFLNDQVEERKESYINSFDIVLLKDETMDIPNAILRHIVSPE 315
BLAST of mRNA_Ecto-sp13_S_contig13135.2551.1 vs. uniprot
Match: A0A2D6U111_9ARCH (5'-nucleotidase n=1 Tax=Candidatus Pacearchaeota archaeon TaxID=2026773 RepID=A0A2D6U111_9ARCH) HSP 1 Score: 68.9 bits (167), Expect = 2.850e-10 Identity = 32/63 (50.79%), Postives = 44/63 (69.84%), Query Frame = 1
Query: 1 LGDSLGDLNMAKGLSAEETLTVGFLNDKVEERMDAYLKAYDVVILGDGSFDFVFELLEEVASK 189
LGD++GD+ M +G + + VGFLN+ VEE ++ Y K YDVVI+GDG F+FV LL E+ K
Sbjct: 224 LGDNVGDVKMVEGFEYDNLIKVGFLNENVEENLEEYKKNYDVVIIGDGDFEFVNGLLGEMNGK 286
BLAST of mRNA_Ecto-sp13_S_contig13135.2551.1 vs. uniprot
Match: A0A1V5QQ14_9ARCH (5'-nucleotidase n=1 Tax=archaeon ADurb.Bin336 TaxID=1866922 RepID=A0A1V5QQ14_9ARCH) HSP 1 Score: 68.6 bits (166), Expect = 3.640e-10 Identity = 31/60 (51.67%), Postives = 45/60 (75.00%), Query Frame = 1
Query: 1 LGDSLGDLNMAKGLSAEETLTVGFLNDKVEERMDAYLKAYDVVILGDGSFDFVFELLEEV 180
LGD+L DL M +G+ E + +GFLN+ +EE ++ Y KAYDVVIL DGS +FV +LL+++
Sbjct: 219 LGDTLDDLQMVEGIKYNEIIQIGFLNNNIEENLEQYKKAYDVVILNDGSMNFVNKLLKQI 278 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13135.2551.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig13135.2551.1 >prot_Ecto-sp13_S_contig13135.2551.1 ID=prot_Ecto-sp13_S_contig13135.2551.1|Name=mRNA_Ecto-sp13_S_contig13135.2551.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=59bp MAKGLSAEETLTVGFLNDKVEERMDAYLKAYDVVILGDGSFDFVFELLEEback to top mRNA from alignment at Ecto-sp13_S_contig13135:1024..2173+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig13135.2551.1 ID=mRNA_Ecto-sp13_S_contig13135.2551.1|Name=mRNA_Ecto-sp13_S_contig13135.2551.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1150bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13135:1024..2173+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig13135:1024..2173+ >mRNA_Ecto-sp13_S_contig13135.2551.1 ID=mRNA_Ecto-sp13_S_contig13135.2551.1|Name=mRNA_Ecto-sp13_S_contig13135.2551.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=177bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13135:1024..2173+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |