prot_Ecto-sp13_S_contig13125.2545.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13125.2545.1
Unique Nameprot_Ecto-sp13_S_contig13125.2545.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length222
Homology
BLAST of mRNA_Ecto-sp13_S_contig13125.2545.1 vs. uniprot
Match: D7FQU1_ECTSI (Intraflagellar transport particle protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQU1_ECTSI)

HSP 1 Score: 270 bits (689), Expect = 5.510e-83
Identity = 142/172 (82.56%), Postives = 143/172 (83.14%), Query Frame = 0
Query:   51 MGRMMTGAVPGTALRASGEARPMTSVSGAGYQSKKQGTFDPLNQGHGPAPALAEKSDNGPEYLAKEMERQVHAMMEESATACVSGDFSQALEKAKEADKKEKALCKQRERHGLVDQINLDLTYAVCFNLANCYHQNGMKKEALREYSAIVKNKQYPQAGRLRANMGNIYYEQ 222
            MGRMMTG VPGTALRASGEARPMTSVSGAGYQSKKQGTFDPLNQGHGPAPALAEKSDNGPEYLAKEMERQ                           DKKEKALCKQRER+GLVDQINLDLTYAVCFNLANCYHQNGMKKEALREY AIVKNKQYPQAGRLRANMGNIYYEQ
Sbjct:    1 MGRMMTGTVPGTALRASGEARPMTSVSGAGYQSKKQGTFDPLNQGHGPAPALAEKSDNGPEYLAKEMERQ---------------------------DKKEKALCKQRERYGLVDQINLDLTYAVCFNLANCYHQNGMKKEALREYGAIVKNKQYPQAGRLRANMGNIYYEQ 145          
BLAST of mRNA_Ecto-sp13_S_contig13125.2545.1 vs. uniprot
Match: A0A7S1C9E8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C9E8_9STRA)

HSP 1 Score: 214 bits (545), Expect = 1.200e-61
Identity = 122/178 (68.54%), Postives = 135/178 (75.84%), Query Frame = 0
Query:   52 GRMMTGAVPGTALRASGEA---RPMTSVSGAGYQSKKQG---TFDPLNQG-HGPAPALAEKSDNGPEYLAKEMERQVHAMMEESATACVSGDFSQALEKAKEADKKEKALCKQRERHGLVDQINLDLTYAVCFNLANCYHQNGMKKEALREYSAIVKNKQYPQAGRLRANMGNIYYEQ 222
            GRMMTG + G    ASG     RPMTSV GAGYQS       +FDPLNQ   GPAP LAEK+DN PE LAKEME+QV+A++E SA A VSGD  QALE+AKEA KKE+ L K RE +GLVDQINLDLTYAVCFNLAN YH NGM  EAL  YS IVKNKQYPQ+GRLR NMGNIYY++
Sbjct:   47 GRMMTGRMTGRVGTASGGGDGPRPMTSVKGAGYQSDPSSAKPSFDPLNQAARGPAPKLAEKADNSPEDLAKEMEKQVNALIEASADAAVSGDAVQALERAKEAGKKERQLQKHRESNGLVDQINLDLTYAVCFNLANAYHLNGMFAEALNTYSLIVKNKQYPQSGRLRVNMGNIYYQE 224          
BLAST of mRNA_Ecto-sp13_S_contig13125.2545.1 vs. uniprot
Match: F0YAE8_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YAE8_AURAN)

HSP 1 Score: 206 bits (525), Expect = 1.270e-59
Identity = 105/159 (66.04%), Postives = 123/159 (77.36%), Query Frame = 0
Query:   68 GEARPMTSVSGAGYQSKKQGT----FDPLNQGHGPAPALAEKSDNGPEYLAKEMERQVHAMMEESATACVSGDFSQALEKAKEADKKEKALCKQRERHGLVDQINLDLTYAVCFNLANCYHQNGMKKEALREYSAIVKNKQYPQAGRLRANMGNIYYEQ 222
            GE RPMTS SGAG+ +K+ G     FDPL QG GPAP LAE++DN PE  A+E E+QVHA++E SA A + G+   ALEKAK+A K+E+ALCK RE HGLVDQIN+DLTYAVCFNLA+ YH   M  EAL  YS +VKNKQYPQ+GRLR NMGNIYYEQ
Sbjct:    3 GEVRPMTSTSGAGFSTKQGGAAARGFDPLGQGRGPAPPLAERADNSPEDQAREFEKQVHALVEASAAAALEGNHDAALEKAKDAGKRERALCKHREAHGLVDQINIDLTYAVCFNLAHAYHSARMHDEALHTYSLLVKNKQYPQSGRLRVNMGNIYYEQ 161          
BLAST of mRNA_Ecto-sp13_S_contig13125.2545.1 vs. uniprot
Match: A0A7S2R9F0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R9F0_9STRA)

HSP 1 Score: 203 bits (516), Expect = 4.480e-57
Identity = 122/218 (55.96%), Postives = 143/218 (65.60%), Query Frame = 0
Query:   12 HNTYPGTSALGTAGAMRSSXXXXXXXXXXXXXGRPPPSQMGRMMTGAV------PGTALRASGEARPMTSVSGAGYQSKKQGTFDPLNQ-GHGPAPALAEKSDNGPEYLAKEMERQVHAMMEESATACVSGDFSQALEKAKEADKKEKALCKQRERHGLVDQINLDLTYAVCFNLANCYHQNGMKKEALREYSAIVKNKQYPQAGRLRANMGNIYYEQ 222
            H+  PGTS     G M +S                     GRMMTG +      PGTA+     +RPMTSVSG GY SK+   FDPLNQ   GPAPALAEK+DN PE LA+EME+QVH+++EESA A    D + ALE A+EA KKE+ALCK RE  GLVDQ+NLDLTY+V FNLA+ YH+N M  EAL  YS +VKNKQY  +GRLR NMGNIYYEQ
Sbjct:   57 HSKPPGTSLAAAGGRMGTSMMG------------------GRMMTGQMMSRMGAPGTAMGGQ-SSRPMTSVSGTGY-SKQPKQFDPLNQQSRGPAPALAEKADNSPEDLAREMEKQVHSLIEESAAAASKKDLNLALEHAREAGKKERALCKHREAKGLVDQMNLDLTYSVVFNLASAYHKNRMYDEALNSYSLLVKNKQYANSGRLRVNMGNIYYEQ 254          
BLAST of mRNA_Ecto-sp13_S_contig13125.2545.1 vs. uniprot
Match: A0A7S3XYV1_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XYV1_HETAK)

HSP 1 Score: 191 bits (484), Expect = 1.360e-53
Identity = 97/134 (72.39%), Postives = 109/134 (81.34%), Query Frame = 0
Query:   89 FDPLNQGHGPAPALAEKSDNGPEYLAKEMERQVHAMMEESATACVSGDFSQALEKAKEADKKEKALCKQRERHGLVDQINLDLTYAVCFNLANCYHQNGMKKEALREYSAIVKNKQYPQAGRLRANMGNIYYEQ 222
            FDPL Q  GPAP LAEK+DN PE  AK+ME+QV+ ++EESA A    DF+ ALE+AKEA K+E+ALCK RE +GLVDQINLDLTYAVCFNLAN YHQNGM  EAL  YS IVKNK YPQ+GRLR NMGNIYYEQ
Sbjct:   14 FDPLGQNRGPAPPLAEKADNSPEDKAKDMEKQVNRLIEESAAAGARRDFAAALERAKEAGKRERALCKHREANGLVDQINLDLTYAVCFNLANAYHQNGMYDEALHTYSLIVKNKTYPQSGRLRVNMGNIYYEQ 147          
BLAST of mRNA_Ecto-sp13_S_contig13125.2545.1 vs. uniprot
Match: A0A8J2S308_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S308_9STRA)

HSP 1 Score: 192 bits (488), Expect = 2.200e-53
Identity = 102/167 (61.08%), Postives = 123/167 (73.65%), Query Frame = 0
Query:   64 LRASG--EARPMTSVSGAGYQSK------KQGTFDPLNQGHGPAPALAEKSDNGPEYLAKEMERQVHAMMEESATACVSGDFSQALEKAKEADKKEKALCKQRERHGLVDQINLDLTYAVCFNLANCYHQNGMKKEALREYSAIVKNKQYPQAGRLRANMGNIYYEQ 222
            LR +G  E RPMTS +G+G+ SK      +   FDPLNQG GPAP LA++ DN  E  A+E E+QVHA++E SA   + GD   ALEKAK+A K+E+ALCK RE +GLVDQIN+DLTYAVCFNLA+ YH   M  EAL  YS +VKNKQYPQ+GRLR NMGNIY+EQ
Sbjct:   45 LRTAGGTEVRPMTSTTGSGFSSKPGSSLGRPANFDPLNQGRGPAPPLAKREDNSAEDKAREYEKQVHALVEASADLALKGDADGALEKAKDAGKRERALCKHREANGLVDQINIDLTYAVCFNLAHAYHGARMHDEALHTYSLLVKNKQYPQSGRLRVNMGNIYFEQ 211          
BLAST of mRNA_Ecto-sp13_S_contig13125.2545.1 vs. uniprot
Match: A0A7S2SE40_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2SE40_9STRA)

HSP 1 Score: 187 bits (475), Expect = 2.580e-51
Identity = 106/181 (58.56%), Postives = 136/181 (75.14%), Query Frame = 0
Query:   50 QMG-RMMTGAVPGTALRASGEARPMTSVSGAGYQS------KKQGTFDPLNQGH-GPAPALAEKSDNGPEYLAKEMERQVHAMMEESATACVSGDFSQALEKAKEADKKEKALCKQRERHGLVDQINLDLTYAVCFNLANCYHQNGMKKEALREYSAIVKNKQYPQAGRLRANMGNIYYEQ 222
            QMG R+MTG       + + EARPMTSV+GAGY S       +QG FDPLNQ + GPAPALA+KS+N PE  AKE+E+QV+ ++E+SA A V+  +  ALEKAKE  +KE+ LCKQRE+HGL +QIN++LTY+V FNLAN +  NGM  +A+ + S IVKNKQYPQ+GRLR NMGNIY++Q
Sbjct:   59 QMGTRLMTGQ------QNNSEARPMTSVNGAGYTSDLSAGGSRQG-FDPLNQANRGPAPALAQKSENSPEERAKEIEKQVNTLLEQSAEAAVAKQYMGALEKAKECARKERQLCKQREQHGLAEQINMELTYSVSFNLANAFALNGMYSDAINQLSMIVKNKQYPQSGRLRVNMGNIYFKQ 232          
BLAST of mRNA_Ecto-sp13_S_contig13125.2545.1 vs. uniprot
Match: A0A7S3GJC5_9EUKA (Hypothetical protein n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3GJC5_9EUKA)

HSP 1 Score: 182 bits (463), Expect = 4.400e-51
Identity = 101/183 (55.19%), Postives = 130/183 (71.04%), Query Frame = 0
Query:   44 GRPPPSQMGRMM--TGAVPGTALRASGEARPMTSVSGAGYQSKKQGT-FDPLNQGH-GPAPALAEKSDNGPEYLAKEMERQVHAMMEESATACVSGDFSQALEKAKEADKKEKALCKQRERHGLVDQINLDLTYAVCFNLANCYHQNGMKKEALREYSAIVKNKQYPQAGRLRANMGNIYYEQ 222
            G PPPS+ G     TGAVP       G  RPMTS+  AG+ S+  G  FDPL QG+ GPAPAL +KS++ PE   +E E++++ +++ESA     G  + AL+KAKEA +KE+ LCKQRE+H LVD IN+DLTY+VCFNLAN YH N M +EAL  Y+ IVKNKQY Q+GRLR NMGN+++EQ
Sbjct:   64 GAPPPSRFGAXXPATGAVP----EDEGPVRPMTSIKAAGFSSRDDGRGFDPLKQGNKGPAPALQKKSESSPEEEMREFEKKINHLIDESAILQQKGQLAAALDKAKEAMRKERQLCKQREQHNLVDMINIDLTYSVCFNLANQYHANKMYQEALSTYNLIVKNKQYAQSGRLRVNMGNVFFEQ 242          
BLAST of mRNA_Ecto-sp13_S_contig13125.2545.1 vs. uniprot
Match: A0A835Z9Y6_9STRA (Intraflagellar transport particle protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9Y6_9STRA)

HSP 1 Score: 185 bits (469), Expect = 6.570e-51
Identity = 108/178 (60.67%), Postives = 124/178 (69.66%), Query Frame = 0
Query:   57 GAVPGTALRASG--------EARPMTSVSGAGYQSKKQG--TFDPLNQGHGPAPALAEKSDNGPEYLAKEMERQVHAMMEESATACVSGDFSQALEKAKEADKKEKALCKQRERHGLVDQ--INLDLTYAVCFNLANCYHQNGMKKEALREYSAIVKNKQYPQAGRLRANMGNIYYEQ 222
            G  PGT++R  G        EARPMTSV+GAGYQSKK G   FDPLNQG GPAPALAEK++N PE +AKEMERQ                         EADK+E+ALCK RER+G  DQ  +NLDLTYAV FNLA  YH  G++KEALREYSAIV+N+QYPQAGRLRANMGNI++EQ
Sbjct:    2 GGAPGTSMRGGGTANGAGGGEARPMTSVAGAGYQSKKGGGAAFDPLNQGRGPAPALAEKANNSPEDMAKEMERQ-------------------------EADKRERALCKFRERNGKGDQAIVNLDLTYAVAFNLAARYHGAGLRKEALREYSAIVRNRQYPQAGRLRANMGNIFFEQ 154          
BLAST of mRNA_Ecto-sp13_S_contig13125.2545.1 vs. uniprot
Match: A0A7S3HMA5_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HMA5_9STRA)

HSP 1 Score: 184 bits (468), Expect = 1.940e-50
Identity = 99/149 (66.44%), Postives = 114/149 (76.51%), Query Frame = 0
Query:   68 GEARPMTSVSGAGYQS--KKQGTFDPLNQGHGPAPALAEKSDNGPEYLAKEMERQVHAMMEESATACVSGDFSQALEKAKEADKKEKALCKQRERHGLVDQINLDLTYAVCFNLANCYHQNGMKKEALREYSAIVKNKQYPQAGRLRAN 214
            GEARPMTSVSGAGY+   K   +FDPLN G GPAP LAEK+DN  E  AKEME++VH ++E SA A V+ D  +ALEKAKEA K E+ALCK RE H L +QINLDLTYA+CFNLAN Y+ N M +EAL  Y  IVKNKQYPQ+GRLR N
Sbjct:   78 GEARPMTSVSGAGYKGNLKDNKSFDPLNIGKGPAPPLAEKADNSSEDKAKEMEKKVHRLIEASADAVVAKDMLRALEKAKEAGKAERALCKFRESHNLAEQINLDLTYAICFNLANAYYHNKMYEEALNTYQLIVKNKQYPQSGRLRVN 226          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13125.2545.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQU1_ECTSI5.510e-8382.56Intraflagellar transport particle protein n=2 Tax=... [more]
A0A7S1C9E8_9STRA1.200e-6168.54Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
F0YAE8_AURAN1.270e-5966.04Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
A0A7S2R9F0_9STRA4.480e-5755.96Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S3XYV1_HETAK1.360e-5372.39Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A8J2S308_9STRA2.200e-5361.08Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S2SE40_9STRA2.580e-5158.56Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
A0A7S3GJC5_9EUKA4.400e-5155.19Hypothetical protein n=1 Tax=Palpitomonas bilix Ta... [more]
A0A835Z9Y6_9STRA6.570e-5160.67Intraflagellar transport particle protein n=1 Tax=... [more]
A0A7S3HMA5_9STRA1.940e-5066.44Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 118..222
e-value: 1.4E-6
score: 30.1
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 117..222
NoneNo IPR availablePANTHERPTHR44117FAMILY NOT NAMEDcoord: 33..222

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13125contigEcto-sp13_S_contig13125:1908..3870 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13125.2545.1mRNA_Ecto-sp13_S_contig13125.2545.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13125 1906..3870 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13125.2545.1 ID=prot_Ecto-sp13_S_contig13125.2545.1|Name=mRNA_Ecto-sp13_S_contig13125.2545.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=222bp
SIPSQLPGSVLHNTYPGTSALGTAGAMRSSGPSTAMRAPGTSTGRPPPSQ
MGRMMTGAVPGTALRASGEARPMTSVSGAGYQSKKQGTFDPLNQGHGPAP
ALAEKSDNGPEYLAKEMERQVHAMMEESATACVSGDFSQALEKAKEADKK
EKALCKQRERHGLVDQINLDLTYAVCFNLANCYHQNGMKKEALREYSAIV
KNKQYPQAGRLRANMGNIYYEQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf