prot_Ecto-sp13_S_contig13124.2543.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13124.2543.1
Unique Nameprot_Ecto-sp13_S_contig13124.2543.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length286
Homology
BLAST of mRNA_Ecto-sp13_S_contig13124.2543.1 vs. uniprot
Match: D7FR92_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR92_ECTSI)

HSP 1 Score: 475 bits (1223), Expect = 4.350e-166
Identity = 261/289 (90.31%), Postives = 270/289 (93.43%), Query Frame = 0
Query:    1 DAQVVAKLAGLALALMAASMLTQHYGNRLTPWIRRSSTILITTFAVVYGIYLVLAHTKYTKVAVGLYYVAAAGSTVGLLMGYKFARFTWHIHDFVIGHLLFIILFLLSALKFPSLVQTWLLFHNALSEGVVIDDILKYARMNKELAGVDEDSLESSSELKKIVQAQAAELELLKQRIMSGGGGAFIGINGSLHQQQQGAG----GGVGAGEEEGIAGSVYSTESGGYSYMMQPLGGDGPDAAPTNRAEMMRPSNSTLDLADMANAKASTTEPPPSQAFQFSSPMSMPPR 285
            + +VVAKLA LALALMAAS+LTQHYGNRLTPWIRRSS ILIT FAVVYGIYL+LAHTKYTKVAVGLYYVAAAGSTVGLLMG+KFARFTWH+HDFVIGHLLFIIL LLSALKFPSLVQTWLLFHNALSEGVVIDDILKYARMNKELAGVDEDSLESSSELKKIV+AQAAELELLKQRIMSGGGG+FIGINGS  QQ          GVGAGEE G+AGSVYST SGGYSYMMQPLGGDGPDAAPTNRAEMMRPSNSTLDLADMANAKASTTEPPPSQAFQFSSPMSMPPR
Sbjct:  120 ELKVVAKLAALALALMAASVLTQHYGNRLTPWIRRSSAILITAFAVVYGIYLLLAHTKYTKVAVGLYYVAAAGSTVGLLMGFKFARFTWHVHDFVIGHLLFIILLLLSALKFPSLVQTWLLFHNALSEGVVIDDILKYARMNKELAGVDEDSLESSSELKKIVEAQAAELELLKQRIMSGGGGSFIGINGSPLQQXXXXXXXXXAGVGAGEE-GMAGSVYSTGSGGYSYMMQPLGGDGPDAAPTNRAEMMRPSNSTLDLADMANAKASTTEPPPSQAFQFSSPMSMPPR 407          
BLAST of mRNA_Ecto-sp13_S_contig13124.2543.1 vs. uniprot
Match: A0A6H5JFR3_9PHAE (1,3-beta-glucan synthase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFR3_9PHAE)

HSP 1 Score: 472 bits (1215), Expect = 1.160e-149
Identity = 259/287 (90.24%), Postives = 269/287 (93.73%), Query Frame = 0
Query:    1 DAQVVAKLAGLALALMAASMLTQHYGNRLTPWIRRSSTILITTFAVVYGIYLVLAHTKYTKVAVGLYYVAAAGSTVGLLMGYKFARFTWHIHDFVIGHLLFIILFLLSALKFPSLVQTWLLFHNALSEGVVIDDILKYARMNKELAGVDEDSLESSSELKKIVQAQAAELELLKQRIMSGGGGAFIGINGSLHQQQQGAGGG--VGAGEEEGIAGSVYSTESGGYSYMMQPLGGDGPDAAPTNRAEMMRPSNSTLDLADMANAKASTTEPPPSQAFQFSSPMSMPPR 285
            + +VVAKLA LALALMAASMLTQHYGNRLTPWIRRSSTILITTFAVVYGIYL+LAHTKYTKVAVGLYYVAAAGSTVGLLMGYKFARFTWHIHDFVIGHLLFIILFLLSALKFPSLVQTWLLFHNALSEGVVIDDILKYARMNKELAGVDEDSLESSSELKKIV+AQAAELELLKQRIMSGGGGAFIGINGS HQ          VGAG EE +AGSVYST+SGGYSYMMQPLGGDGPDA P NRAEMM PSNS+L+LADMANA+ASTTEPPPSQAFQFSSP+SMPPR
Sbjct: 1931 ELKVVAKLAALALALMAASMLTQHYGNRLTPWIRRSSTILITTFAVVYGIYLLLAHTKYTKVAVGLYYVAAAGSTVGLLMGYKFARFTWHIHDFVIGHLLFIILFLLSALKFPSLVQTWLLFHNALSEGVVIDDILKYARMNKELAGVDEDSLESSSELKKIVEAQAAELELLKQRIMSGGGGAFIGINGSPHQXXXXXXXXXXVGAGNEECMAGSVYSTDSGGYSYMMQPLGGDGPDAVP-NRAEMMHPSNSSLNLADMANARASTTEPPPSQAFQFSSPVSMPPR 2216          
BLAST of mRNA_Ecto-sp13_S_contig13124.2543.1 vs. uniprot
Match: A0A835Z1S2_9STRA (1,3-beta-glucan synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1S2_9STRA)

HSP 1 Score: 179 bits (453), Expect = 4.570e-47
Identity = 126/303 (41.58%), Postives = 172/303 (56.77%), Query Frame = 0
Query:    1 DAQVVAKLAGLALALMAASMLTQHYGNRLTPWIRRSSTILITTFAVVYGIYLVLAHTKYTKVAVGLYYVAAAGSTVGLLMGYKFARFTWHIHDFVIGHLLFIILFLLSALKFPSLVQTWLLFHNALSEGVVIDDILKYARMNKELAGVDEDSLESSSELKKIVQAQAAELELLKQRIMSGGGGAFIGINGSLHQQQQGAGGGVGAGEEEGIAGSVYSTESGGYS---YMMQPLGGDGPDAAPTNR----AEMMRPSNSTLDLADMANAKASTTEPPP-----------SQAFQFSSPMSMPPR 285
            + Q + K++ LALAL+    +    G+  TPWIRRS  ++I++     GI L++ H +Y ++A+GLYYV AA S V +L+G+   R  +HIHDF++GH+LF+ LFL++AL+FP  VQTWLLFHNALS+GVVI+DILKYAR N+E    +ED L+ ++ELKK+++ Q   L+ L  R  + GGG                  GV  G E G A S  S+ SGG      +  PL  D  D A ++     A MMR S STLDL+ MA+                      QAFQF  P   PPR
Sbjct: 2040 EVQAIIKVSSLALALLLGYAIVDKCGH--TPWIRRSGKLIISSVVFCGGIALMIKHYEYIRIAIGLYYVLAALSGVCVLLGFTGMRVAYHIHDFILGHVLFLALFLMAALQFPKDVQTWLLFHNALSQGVVIEDILKYARKNQEATAGNEDKLDDTAELKKLIKHQEYMLQQLMARAAAHGGGTN----------------GVPNGRENGAA-SRTSSLSGGDGRPGVLTMPLADD--DGADSDTSVAPASMMRASRSTLDLSKMASTSXXXXXXXXXXXXXXXXLAQQQAFQFRGPAHFPPR 2321          
BLAST of mRNA_Ecto-sp13_S_contig13124.2543.1 vs. uniprot
Match: A0A835Z4B5_9STRA (1,3-beta-glucan synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4B5_9STRA)

HSP 1 Score: 116 bits (290), Expect = 2.130e-25
Identity = 55/111 (49.55%), Postives = 84/111 (75.68%), Query Frame = 0
Query:   34 RRSSTILITTFAVVYGIYLVLAHTKYTKVAVGLYYVAAAGSTVGLLMGYKFARFTWHIHDFVIGHLLFIILFLLSALKFPSLVQTWLLFHNALSEGVVIDDILKYARMNKE 144
            R    +LI+T     G+YL++   +Y ++A+GLYYV +A  +V +L+G++  R  +HIHDF++G+++F++LF+ +AL+ P  VQTWLLFHNALS+GVVI+DILKYAR  +E
Sbjct: 1632 RLPGKLLISTAVFYGGVYLMVTEYEYIRIAIGLYYVISAVGSVSVLLGFEGIRHAYHIHDFILGNIMFLVLFIFAALQLPKNVQTWLLFHNALSQGVVIEDILKYARRTQE 1742          
BLAST of mRNA_Ecto-sp13_S_contig13124.2543.1 vs. uniprot
Match: A0A7S4EG16_9STRA (1,3-beta-glucan synthase n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EG16_9STRA)

HSP 1 Score: 108 bits (271), Expect = 6.950e-23
Identity = 67/168 (39.88%), Postives = 97/168 (57.74%), Query Frame = 0
Query:   33 IRRSSTILITTFAVVYGIYLVLAHTKYTKVAVGLYYVAAAGSTVGLLMGYKFARFTWHIHDFVIGHLLFIILFLLSALKFPSLVQTWLLFHNALSEGVVIDDILKYARMNKE---LAGVDEDSLESSSELKKIVQAQAAELELLKQRIMSGGGGAFIGINGSLHQQQQ 197
            +RR+  IL +   V   + L +  + Y + A+  YY A A   +G+L G+KF +  + IHD V  H++F+ LFL +AL+ PS+ QTWLL+HNALS  VV+ DILKYAR  K+     G +ED L+  +ELKK+V  Q   LE +     S    A +  + +L   QQ
Sbjct: 1899 VRRTLGILSSVGIVATVLALFIEDSNYLRYALAGYYGAGAVCLIGILFGFKFVKSFYLIHDIVCAHIIFVPLFLCAALQLPSMFQTWLLYHNALSTNVVVSDILKYARKTKDSGGTGGANEDLLDQVNELKKVVHKQEKMLESMGVAAQSSDASAPVRTSATLEYNQQ 2066          
BLAST of mRNA_Ecto-sp13_S_contig13124.2543.1 vs. uniprot
Match: A0A448ZGS7_9STRA (1,3-beta-glucan synthase n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZGS7_9STRA)

HSP 1 Score: 108 bits (269), Expect = 1.270e-22
Identity = 61/142 (42.96%), Postives = 91/142 (64.08%), Query Frame = 0
Query:   33 IRRSSTILITTFAVVYGIYLVLAHTKYTKVAVGLYYVAAAGSTVGLLMGYKFARFTWHIHDFVIGHLLFIILFLLSALKFPSLVQTWLLFHNALSEGVVIDDILKYARMNKE---LAGVDEDSLESSSELKKIVQAQAAELE 171
            +RR+  IL+    VV  + L +  + Y + A+  YY A A   +GLL G+KF +  + IHD V  H++F+ LF+L AL+ PS++QTWLL+HNALS  VV+ DILKYAR +K+     G +E+ ++  +ELKK++  Q   LE
Sbjct: 1897 VRRTLGILVAVGIVVTIMALFIEDSNYLRYALAGYYGAGAVCMIGLLYGFKFVKVFYLIHDVVCAHIIFVPLFILGALQLPSMIQTWLLYHNALSTNVVVSDILKYARKSKDSGGTGGANEELIDQVNELKKVIHKQEKLLE 2038          
BLAST of mRNA_Ecto-sp13_S_contig13124.2543.1 vs. uniprot
Match: A0A1Z5K6M3_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K6M3_FISSO)

HSP 1 Score: 105 bits (261), Expect = 6.320e-22
Identity = 63/141 (44.68%), Postives = 87/141 (61.70%), Query Frame = 0
Query:   33 IRRSSTILITTFAVVYGIYLVLAHTKYTKVAVGLYYVAAAGSTVGLLMGYKFARFTWHIHDFVIGHLLFIILFLLSALKFPSLVQTWLLFHNALSEGVVIDDILKYARMNKELAGVDE---DSLESSSELKKIVQAQAAEL 170
            +RR+  I I    +   + L +  + Y + A+  YY   A   +GLL G K  +  + +HD V GHL+FI LFLL+AL+ P L+QTWLL+HNALS  VV+ DIL+YAR ++E  G+ +   D LE  SELKK+VQ Q   L
Sbjct:  249 VRRTIGIAIFCGLIAGVVTLFIEDSNYVRYALSAYYALGALCQIGLLAGVKLVKHFYMLHDIVCGHLIFIPLFLLAALQLPRLLQTWLLYHNALSADVVVSDILRYARKSQESGGMTDAPDDLLEQISELKKLVQRQEQAL 389          
BLAST of mRNA_Ecto-sp13_S_contig13124.2543.1 vs. uniprot
Match: A0A1Z5JIZ9_FISSO (1,3-beta-glucan synthase n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JIZ9_FISSO)

HSP 1 Score: 105 bits (263), Expect = 7.800e-22
Identity = 64/141 (45.39%), Postives = 87/141 (61.70%), Query Frame = 0
Query:   33 IRRSSTILITTFAVVYGIYLVLAHTKYTKVAVGLYYVAAAGSTVGLLMGYKFARFTWHIHDFVIGHLLFIILFLLSALKFPSLVQTWLLFHNALSEGVVIDDILKYARMNKELAGVDE---DSLESSSELKKIVQAQAAEL 170
            +RR+  I I    +   + L L  + Y + A+  YY   A   +GLL G K  +  + +HD V GHL+FI LFLL+AL+ P L+QTWLL+HNALS  VV+ DIL+YAR ++E  G+ +   D LE  SELKK+VQ Q   L
Sbjct: 1780 VRRTIGIAIFCGLIAGVVTLFLEDSNYVRYALSAYYALGALCQIGLLAGVKLVKHFYMLHDIVCGHLIFIPLFLLAALQLPRLLQTWLLYHNALSADVVVSDILRYARKSQESGGMTDAPDDLLEQISELKKLVQRQEQAL 1920          
BLAST of mRNA_Ecto-sp13_S_contig13124.2543.1 vs. uniprot
Match: A0A7S1D0P9_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D0P9_CYCTE)

HSP 1 Score: 102 bits (255), Expect = 3.300e-21
Identity = 57/129 (44.19%), Postives = 85/129 (65.89%), Query Frame = 0
Query:   40 LITTFAVVYGIYLVLAHTKYTKVAVGLYYVAAAGSTVGLLMGYKFARFTWHIHDFVIGHLLFIILFLLSALKFPSLVQTWLLFHNALSEGVVIDDILKYARMNKELAGVD--EDSLESSSELKKIVQAQ 166
            L+T+  ++YG         + + ++  YY  AA + +G+L G K  +F + +HD + GH+LFI LF+L+AL+ PS +QTWLL+HNALS  VV+ DIL+YAR N++  G D  ED  E  +EL+K+VQ Q
Sbjct:  226 LVTSIFILYG-----EDIDFVRYSMAGYYFLAAVAMMGVLFGVKLVKFIYFMHDLICGHVLFIPLFILAALQLPSHIQTWLLYHNALSADVVVGDILRYARKNRDSGGDDGDEDLAEQVAELRKLVQKQ 349          
BLAST of mRNA_Ecto-sp13_S_contig13124.2543.1 vs. uniprot
Match: A0A1E7FFZ9_9STRA (1,3-beta-glucan synthase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FFZ9_9STRA)

HSP 1 Score: 103 bits (257), Expect = 4.840e-21
Identity = 60/144 (41.67%), Postives = 87/144 (60.42%), Query Frame = 0
Query:   33 IRRSSTILITTFAVVYGIYLVLAHTKYTKVAVGLYYVAAAGSTVGLLMGYKFARFTWHIHDFVIGHLLFIILFLLSALKFPSLVQTWLLFHNALSEGVVIDDILKYARMNKELAGV-----DEDSLESSSELKKIVQAQAAELE 171
            +RR+  IL+    VV    + +    Y + A+  YY + A   +GLL G+KF +  + IHD V  H++F  LF+L AL+ P ++QTWLL+HNALS  VV+ DIL+YAR  KE  G+     +ED ++  +ELKK+V  Q   LE
Sbjct: 1911 VRRTIGILVAVGVVVAIFTVFIEDLNYLRYALAGYYGSGAICMLGLLYGFKFVKIFYLIHDIVCAHIIFFPLFVLGALQLPGMIQTWLLYHNALSSNVVVSDILRYARRTKESGGIGSGEANEDLMDQVNELKKVVYKQEKMLE 2054          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13124.2543.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FR92_ECTSI4.350e-16690.31Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JFR3_9PHAE1.160e-14990.241,3-beta-glucan synthase n=1 Tax=Ectocarpus sp. CC... [more]
A0A835Z1S2_9STRA4.570e-4741.581,3-beta-glucan synthase n=1 Tax=Tribonema minus T... [more]
A0A835Z4B5_9STRA2.130e-2549.551,3-beta-glucan synthase n=1 Tax=Tribonema minus T... [more]
A0A7S4EG16_9STRA6.950e-2339.881,3-beta-glucan synthase n=1 Tax=Pseudo-nitzschia ... [more]
A0A448ZGS7_9STRA1.270e-2242.961,3-beta-glucan synthase n=1 Tax=Pseudo-nitzschia ... [more]
A0A1Z5K6M3_FISSO6.320e-2244.68Uncharacterized protein n=1 Tax=Fistulifera solari... [more]
A0A1Z5JIZ9_FISSO7.800e-2245.391,3-beta-glucan synthase n=1 Tax=Fistulifera solar... [more]
A0A7S1D0P9_CYCTE3.300e-2144.19Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A1E7FFZ9_9STRA4.840e-2141.671,3-beta-glucan synthase n=1 Tax=Fragilariopsis cy... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 285..285
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 55..65
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 86..90
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 32..54
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..31
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 91..110
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 111..285
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 66..85
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availableTMHMMTMhelixcoord: 94..116
NoneNo IPR availableTMHMMTMhelixcoord: 62..84
NoneNo IPR availableTMHMMTMhelixcoord: 37..55
NoneNo IPR availableTMHMMTMhelixcoord: 5..22

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13124contigEcto-sp13_S_contig13124:653..4464 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13124.2543.1mRNA_Ecto-sp13_S_contig13124.2543.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13124 653..4464 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13124.2543.1 ID=prot_Ecto-sp13_S_contig13124.2543.1|Name=mRNA_Ecto-sp13_S_contig13124.2543.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=286bp
DAQVVAKLAGLALALMAASMLTQHYGNRLTPWIRRSSTILITTFAVVYGI
YLVLAHTKYTKVAVGLYYVAAAGSTVGLLMGYKFARFTWHIHDFVIGHLL
FIILFLLSALKFPSLVQTWLLFHNALSEGVVIDDILKYARMNKELAGVDE
DSLESSSELKKIVQAQAAELELLKQRIMSGGGGAFIGINGSLHQQQQGAG
GGVGAGEEEGIAGSVYSTESGGYSYMMQPLGGDGPDAAPTNRAEMMRPSN
STLDLADMANAKASTTEPPPSQAFQFSSPMSMPPR*
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