mRNA_Ecto-sp13_S_contig13111.2538.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
|
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig13111.2538.1 vs. uniprot
Match: A0A6H5KKY7_9PHAE (Cytochrome b5 heme-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKY7_9PHAE) HSP 1 Score: 164 bits (416), Expect = 2.150e-45 Identity = 103/237 (43.46%), Postives = 105/237 (44.30%), Query Frame = 1
Query: 4 YFMGISVAYHLCVAPDHDTLESSIVNSIEAKREGERQRA-----------------------------------------------------------------------------------------------------------------------------------EGYGDDWGEVQVRHSGNFSNGNPFMTQVMGGINYQIEHHLFPSMSHMLYAEIAPIVKDACKEFNIPY 321
YFMGISVAYHLCVAPDHDTLESSIVNSIEAKREGERQRA +GYGDDWGEVQVRHSGNFSNGNPF+TQ MGGINYQIEHHLFPSMSHMLYAEIAPIVKDACKEFNIPY
Sbjct: 431 YFMGISVAYHLCVAPDHDTLESSIVNSIEAKREGERQRAVEAAXXXXXXXXXXXXXXXXXXXXXVQNQEKTVAATGEGGDFRRRRCIGKGGQRRETIGGATFETTTVAVAVPEPPATEAASVACLCESCNIPGGDGGVVGGAGREARGLGPAGGARGGGSSSATGDTEEEDGYGDDWGEVQVRHSGNFSNGNPFVTQAMGGINYQIEHHLFPSMSHMLYAEIAPIVKDACKEFNIPY 667
BLAST of mRNA_Ecto-sp13_S_contig13111.2538.1 vs. uniprot
Match: A0A0G4FKE0_9ALVE (Cytochrome b5 heme-binding domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4FKE0_9ALVE) HSP 1 Score: 113 bits (283), Expect = 3.560e-27 Identity = 50/108 (46.30%), Postives = 75/108 (69.44%), Query Frame = 1
Query: 1 SYFMGISVAYHLCVAPDHDTLESSIVNSIEAKREGERQRAEGYGDDWGEVQVRHSGNFSNGNPFMTQVMGGINYQIEHHLFPSMSHMLYAEIAPIVKDACKEFNIPYK 324
+Y+ +++ Y +C+APDHDT ES +N +A+ G+++ DWGE+QVR S NF+ P + + GGINYQIEHHLFP +SH+ Y ++APIV+ C+EF +PY+
Sbjct: 407 AYWGSLNILYWMCIAPDHDTWESLSLNKKKAEEGGDKEEKM----DWGEMQVRESSNFAVDYPVVCTLFGGINYQIEHHLFPGVSHVHYRDLAPIVRSTCQEFGVPYQ 510
BLAST of mRNA_Ecto-sp13_S_contig13111.2538.1 vs. uniprot
Match: A0A5K0U7T4_9VIRU (Cytochrome b5-like heme/steroid binding domain n=1 Tax=Yasminevirus sp. GU-2018 TaxID=2420051 RepID=A0A5K0U7T4_9VIRU) HSP 1 Score: 102 bits (255), Expect = 1.780e-23 Identity = 51/107 (47.66%), Postives = 69/107 (64.49%), Query Frame = 1
Query: 1 SYFMGISVAYHLCVAPDHDTLESSIVNSIEAKREGERQRAEGYGDDWGEVQVRHSGNFSNGNPFMTQVMGGINYQIEHHLFPSMSHMLYAEIAPIVKDACKEFNIPY 321
+Y + +++ Y + + PDHDT + + N I++ + G DWGE+QVR+SGNF+ N T MGGINYQIEHHLFPS+ H+ Y I+ IVK C EFNIPY
Sbjct: 319 AYIVPLNILYFVGIFPDHDT-QKTADNKIKSTDSTDN----GLDIDWGEMQVRNSGNFATSNKVFTYFMGGINYQIEHHLFPSVCHVHYPAISSIVKKTCAEFNIPY 420
BLAST of mRNA_Ecto-sp13_S_contig13111.2538.1 vs. uniprot
Match: A0A5E8CJX7_9ZZZZ (Fatty acid desaturase n=1 Tax=seawater metagenome TaxID=1561972 RepID=A0A5E8CJX7_9ZZZZ) HSP 1 Score: 101 bits (252), Expect = 3.770e-23 Identity = 53/109 (48.62%), Postives = 65/109 (59.63%), Query Frame = 1
Query: 1 SYFMGISVAYHLCVAPDHDTLESSIVNSIEAKREGERQRAEGYGDDWGEVQVRHSGNFSNGN--PFMTQVMGGINYQIEHHLFPSMSHMLYAEIAPIVKDACKEFNIPY 321
SY + +++Y C+ PDHDT +S I +AK +DWGE QV HS NF + + GGINYQIEHHLFPSM H+ Y EIAPIVK C+EFNI Y
Sbjct: 303 SYLIAANISYGCCILPDHDTYQSMI---NQAKT-----------NDWGEAQVVHSANFETKRFCDYFCYIFGGINYQIEHHLFPSMCHVHYPEIAPIVKKTCQEFNIEY 397
BLAST of mRNA_Ecto-sp13_S_contig13111.2538.1 vs. uniprot
Match: A0A0V0QTF1_PSEPJ (Cytochrome b5-like heme/steroid binding domain n=1 Tax=Pseudocohnilembus persalinus TaxID=266149 RepID=A0A0V0QTF1_PSEPJ) HSP 1 Score: 100 bits (249), Expect = 1.070e-22 Identity = 51/108 (47.22%), Postives = 67/108 (62.04%), Query Frame = 1
Query: 4 YFMGISVAYHLCVAPDHDTLESSIVNSIEAKREGERQRAEGYGDDWGEVQVRHSGNFSNGNPF--MTQVMGGINYQIEHHLFPSMSHMLYAEIAPIVKDACKEFNIPY 321
YF+G ++AY L + PDHDT ++ Q + DWGE QVR+SGNF N F + GGINYQIEHHLFPSM ++ +I+PIV++ CKEFN+PY
Sbjct: 320 YFIGYNMAYSLAIVPDHDTNQT-------------HQNFDPSRKDWGETQVRNSGNFGNKVFFDLYNHIFGGINYQIEHHLFPSMCNVHLNQISPIVQETCKEFNVPY 414
BLAST of mRNA_Ecto-sp13_S_contig13111.2538.1 vs. uniprot
Match: A0A6C0KGR0_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0KGR0_9ZZZZ) HSP 1 Score: 98.6 bits (244), Expect = 5.260e-22 Identity = 48/112 (42.86%), Postives = 68/112 (60.71%), Query Frame = 1
Query: 4 YFMGISVAYHLCVAPDHDTLESSIVNSIEAKREGERQRAEGYGD------DWGEVQVRHSGNFSNGNPFMTQVMGGINYQIEHHLFPSMSHMLYAEIAPIVKDACKEFNIPY 321
+ +G+++ Y + APDHD N ++ + + Q DWGE+QV+HSGNF + P T+ GGINYQIEHHLFP++++ EI+ IVK+ CKEFNIPY
Sbjct: 295 HLVGMNIGYFIGSAPDHDMYP----NHLQIEEHNKEQSXXXXXXXQYIIKDWGEIQVKHSGNFMSNYPLFTRFYGGINYQIEHHLFPTLNNHKLVEISSIVKECCKEFNIPY 402
BLAST of mRNA_Ecto-sp13_S_contig13111.2538.1 vs. uniprot
Match: A0A6C0EHR9_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0EHR9_9ZZZZ) HSP 1 Score: 97.4 bits (241), Expect = 1.200e-21 Identity = 52/110 (47.27%), Postives = 68/110 (61.82%), Query Frame = 1
Query: 4 YFMGISVAYHLCVAPDHDTLESSIVNSIEAKREGERQRAEGYGDDWGEVQVRHSGNFSNGNPF----MTQVMGGINYQIEHHLFPSMSHMLYAEIAPIVKDACKEFNIPY 321
+ +G ++ Y + +PDHD ++ S + G DWGE+QVRHSGNF N + T++MGGINYQIEHHLFP++S AEIAPIVK+ C EFNIPY
Sbjct: 291 HIVGANIGYFIGSSPDHDMYDTHKQVS----------KNNGILMDWGELQVRHSGNFFNTDTIPHILFTKLMGGINYQIEHHLFPTLSSHRLAEIAPIVKEVCIEFNIPY 390
BLAST of mRNA_Ecto-sp13_S_contig13111.2538.1 vs. uniprot
Match: A0A7S4IBV6_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4IBV6_9EUKA) HSP 1 Score: 93.2 bits (230), Expect = 1.750e-21 Identity = 45/107 (42.06%), Postives = 63/107 (58.88%), Query Frame = 1
Query: 1 SYFMGISVAYHLCVAPDHDTLESSIVNSIEAKREGERQRAEGYGDDWGEVQVRHSGNFSNGNPFMTQVMGGINYQIEHHLFPSMSHMLYAEIAPIVKDACKEFNIPY 321
+YF+G ++ Y +AP+HD E ++ + R DWGE QVR S NFS P + ++GGINYQIEHHLFP +SH Y E+ IV+D C++ +PY
Sbjct: 61 AYFLGFNLLYFCSIAPNHDVAEVAVAAQM---------RGAVGTVDWGEAQVRASANFSTNVPLIGLLLGGINYQIEHHLFPGVSHAHYPELQQIVRDECEKRGLPY 158
BLAST of mRNA_Ecto-sp13_S_contig13111.2538.1 vs. uniprot
Match: D7G102_ECTSI (Fatty acid desaturase, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G102_ECTSI) HSP 1 Score: 85.9 bits (211), Expect = 4.300e-20 Identity = 38/39 (97.44%), Postives = 39/39 (100.00%), Query Frame = 1
Query: 205 MGGINYQIEHHLFPSMSHMLYAEIAPIVKDACKEFNIPY 321
MGGINYQIEHHLFPSMSHMLYAEIAPIVKDAC+EFNIPY
Sbjct: 1 MGGINYQIEHHLFPSMSHMLYAEIAPIVKDACEEFNIPY 39
BLAST of mRNA_Ecto-sp13_S_contig13111.2538.1 vs. uniprot
Match: A0A7S1KUI1_9EUKA (Hypothetical protein n=1 Tax=Percolomonas cosmopolitus TaxID=63605 RepID=A0A7S1KUI1_9EUKA) HSP 1 Score: 91.7 bits (226), Expect = 2.110e-19 Identity = 45/106 (42.45%), Postives = 65/106 (61.32%), Query Frame = 1
Query: 4 YFMGISVAYHLCVAPDHDTLESSIVNSIEAKREGERQRAEGYGDDWGEVQVRHSGNFSNGNPFMTQVMGGINYQIEHHLFPSMSHMLYAEIAPIVKDACKEFNIPY 321
++ G+ + Y++ VAP HDT N + K++ DWG+ Q+ HS NFS+ N +T ++GG+NYQIEHHLFPS+S + IA IVK+ C E N+PY
Sbjct: 360 FWAGVGITYYIIVAPGHDT------NVVSFKQK----------QDWGDQQIMHSSNFSHSNKVLTFLVGGMNYQIEHHLFPSVSWIHLPRIAKIVKEVCAERNMPY 449 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13111.2538.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig13111.2538.1 >prot_Ecto-sp13_S_contig13111.2538.1 ID=prot_Ecto-sp13_S_contig13111.2538.1|Name=mRNA_Ecto-sp13_S_contig13111.2538.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=106bp MGISVAYHLCVAPDHDTLESSIVNSIEAKREGERQRAEGYGDDWGEVQVRback to top mRNA from alignment at Ecto-sp13_S_contig13111:3531..4707- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig13111.2538.1 ID=mRNA_Ecto-sp13_S_contig13111.2538.1|Name=mRNA_Ecto-sp13_S_contig13111.2538.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1177bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13111:3531..4707- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig13111:3531..4707- >mRNA_Ecto-sp13_S_contig13111.2538.1 ID=mRNA_Ecto-sp13_S_contig13111.2538.1|Name=mRNA_Ecto-sp13_S_contig13111.2538.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=318bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13111:3531..4707- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |