mRNA_Ecto-sp13_S_contig13101.2534.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig13101.2534.1 vs. uniprot
Match: D8LTN1_ECTSI (Phosphoenolpyruvate carboxylase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTN1_ECTSI) HSP 1 Score: 476 bits (1226), Expect = 4.740e-160 Identity = 236/243 (97.12%), Postives = 237/243 (97.53%), Query Frame = 1
Query: 1 FEPPAVPTEQFRATMDTLSEVSCEAYRDIVRKDPRFVPYFRTATPELELGGLNIGSRPAKRRPTGGVESLRAIPWVFSWTQTRLNLPAWLGVGDALAAVASTKEGVENLSTMYATWPFFKTNIDLFEMIIAKSDTRIAEHYDSELVVDGEAKELGTELRRRLGETTAEILKVSENPELIAFNKLLRWQLALRNPYLDPVNVMQAHILHRLRNGKFGSPAEEQYLQDALILTVTGIAGGMRNTG 729
FEPPAVPTEQFRATMDTLSE SC AYRDIVRKDPRFVPYFRTATPELELGGLNIGSRPAKRRPTGGVESLRAIPWVFSWTQTRLNLPAWLGVGDALAAVASTKEGVENLSTMYATWPFFKTNIDLFEMIIAKSD RIAEHYDSELVVDGEAKELGTELRRRLGET EILKVSENPELIAFNKLLRWQLALRNPYLDPVNVMQAHILHRLRNGKFGSPAEEQ+L DALILTVTGIAGGMRNTG
Sbjct: 707 FEPPAVPTEQFRATMDTLSEASCAAYRDIVRKDPRFVPYFRTATPELELGGLNIGSRPAKRRPTGGVESLRAIPWVFSWTQTRLNLPAWLGVGDALAAVASTKEGVENLSTMYATWPFFKTNIDLFEMIIAKSDARIAEHYDSELVVDGEAKELGTELRRRLGETAGEILKVSENPELIAFNKLLRWQLALRNPYLDPVNVMQAHILHRLRNGKFGSPAEEQHLHDALILTVTGIAGGMRNTG 949
BLAST of mRNA_Ecto-sp13_S_contig13101.2534.1 vs. uniprot
Match: A0A097IUC8_9PHAE (Phosphoenolpyruvate carboxylase n=2 Tax=Scytosiphonaceae TaxID=2891 RepID=A0A097IUC8_9PHAE) HSP 1 Score: 431 bits (1109), Expect = 1.450e-142 Identity = 212/243 (87.24%), Postives = 225/243 (92.59%), Query Frame = 1
Query: 1 FEPPAVPTEQFRATMDTLSEVSCEAYRDIVRKDPRFVPYFRTATPELELGGLNIGSRPAKRRPTGGVESLRAIPWVFSWTQTRLNLPAWLGVGDALAAVASTKEGVENLSTMYATWPFFKTNIDLFEMIIAKSDTRIAEHYDSELVVDGEAKELGTELRRRLGETTAEILKVSENPELIAFNKLLRWQLALRNPYLDPVNVMQAHILHRLRNGKFGSPAEEQYLQDALILTVTGIAGGMRNTG 729
FEPPAVP+E++R TMDTLSEVSCEAYR+IVRKD RFVPYFRTATPELELG LNIGSRPAKRRPTGGVESLRAIPWVFSWTQTRLNLPAWLGVGDALAAVAST EG +L MY WPFF+TNIDLFEMI AKSD +IAE+YD+ELV D EAK+LG ELRRRLGET EILKVSENPELIA+NKLLRWQLALRNPYLDPVNVMQAHILHRLRNGKF SPAEEQ+LQDALI+TVTGIAGGMRNTG
Sbjct: 707 FEPPAVPSEKWRETMDTLSEVSCEAYREIVRKDARFVPYFRTATPELELGALNIGSRPAKRRPTGGVESLRAIPWVFSWTQTRLNLPAWLGVGDALAAVASTPEGKADLRNMYEQWPFFETNIDLFEMIAAKSDVQIAENYDAELVADAEAKDLGAELRRRLGETAGEILKVSENPELIAYNKLLRWQLALRNPYLDPVNVMQAHILHRLRNGKFSSPAEEQHLQDALIITVTGIAGGMRNTG 949
BLAST of mRNA_Ecto-sp13_S_contig13101.2534.1 vs. uniprot
Match: A0A0A0V6T3_SACJA (Phosphoenolpyruvate carboxylase n=1 Tax=Saccharina japonica TaxID=88149 RepID=A0A0A0V6T3_SACJA) HSP 1 Score: 405 bits (1041), Expect = 1.930e-132 Identity = 201/243 (82.72%), Postives = 213/243 (87.65%), Query Frame = 1
Query: 1 FEPPAVPTEQFRATMDTLSEVSCEAYRDIVRKDPRFVPYFRTATPELELGGLNIGSRPAKRRPTGGVESLRAIPWVFSWTQTRLNLPAWLGVGDALAAVASTKEGVENLSTMYATWPFFKTNIDLFEMIIAKSDTRIAEHYDSELVVDGEAKELGTELRRRLGETTAEILKVSENPELIAFNKLLRWQLALRNPYLDPVNVMQAHILHRLRNGKFGSPAEEQYLQDALILTVTGIAGGMRNTG 729
FEPPAVP+ ++R TMD LS VSCEAYR IVRKDPRFVPY RTATPELELG LNIGSRPAKRRPTGGVESLRAIPWVFSWTQTRLNLPAWLGVGDALA VAST EG +L MY WPFF TNIDLFEMI+AKSD RIAEHYD+ELV EAKELG+ELRRRL ET EILKVSEN ELI+ NKLLRWQLALRNPYLDPVN+MQAHILHRLRN KFG+P EE+ LQDAL +TV GIAGGMRNTG
Sbjct: 707 FEPPAVPSPEWRGTMDRLSAVSCEAYRGIVRKDPRFVPYLRTATPELELGALNIGSRPAKRRPTGGVESLRAIPWVFSWTQTRLNLPAWLGVGDALADVASTAEGKADLRGMYEDWPFFATNIDLFEMIVAKSDPRIAEHYDNELVAGAEAKELGSELRRRLKETAGEILKVSENKELISSNKLLRWQLALRNPYLDPVNIMQAHILHRLRNDKFGAPEEEKQLQDALAITVKGIAGGMRNTG 949
BLAST of mRNA_Ecto-sp13_S_contig13101.2534.1 vs. uniprot
Match: A0A097IUD4_9PHAE (Phosphoenolpyruvate carboxylase n=5 Tax=Sargassum TaxID=3015 RepID=A0A097IUD4_9PHAE) HSP 1 Score: 390 bits (1003), Expect = 8.670e-127 Identity = 191/243 (78.60%), Postives = 212/243 (87.24%), Query Frame = 1
Query: 1 FEPPAVPTEQFRATMDTLSEVSCEAYRDIVRKDPRFVPYFRTATPELELGGLNIGSRPAKRRPTGGVESLRAIPWVFSWTQTRLNLPAWLGVGDALAAVASTKEGVENLSTMYATWPFFKTNIDLFEMIIAKSDTRIAEHYDSELVVDGEAKELGTELRRRLGETTAEILKVSENPELIAFNKLLRWQLALRNPYLDPVNVMQAHILHRLRNGKFGSPAEEQYLQDALILTVTGIAGGMRNTG 729
FEPPAVP+ ++R TMD LSEVSCEAYRDIVR+D RFVPYFRTATPELELG LNIGSRPAKRRPTGGVE+LRAIPWVFSWTQTRLNLPAWLGV DAL+ +AST +G L +MY WPFF TNIDLFE I+AKSD IAEHYD ELV D +AKELG ELRRRL ET+AEILKVSE P LIA+N++LRWQL LR PYLDPVNVMQAHILHRLR+G FGS EEQ+L+DAL++T+ GIAGGMRNTG
Sbjct: 708 FEPPAVPSGKWRKTMDRLSEVSCEAYRDIVRRDERFVPYFRTATPELELGSLNIGSRPAKRRPTGGVETLRAIPWVFSWTQTRLNLPAWLGVADALSELASTDDGKATLRSMYDEWPFFATNIDLFETILAKSDVDIAEHYDKELVSDAKAKELGAELRRRLQETSAEILKVSERPGLIAYNEVLRWQLVLRKPYLDPVNVMQAHILHRLRSGAFGSLEEEQHLKDALVITIKGIAGGMRNTG 950
BLAST of mRNA_Ecto-sp13_S_contig13101.2534.1 vs. uniprot
Match: A0A835YNR8_9STRA (Phosphoenolpyruvate carboxylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNR8_9STRA) HSP 1 Score: 300 bits (767), Expect = 2.190e-92 Identity = 149/237 (62.87%), Postives = 181/237 (76.37%), Query Frame = 1
Query: 19 PTEQFRATMDTLSEVSCEAYRDIVRKDPRFVPYFRTATPELELGGLNIGSRPAKRRPTGGVESLRAIPWVFSWTQTRLNLPAWLGVGDALAAVASTKEGVENLSTMYATWPFFKTNIDLFEMIIAKSDTRIAEHYDSELVVDGEAKELGTELRRRLGETTAEILKVSENPELIAFNKLLRWQLALRNPYLDPVNVMQAHILHRLRNGKFGSPAEEQYLQDALILTVTGIAGGMRNTG 729
P + +R TM TLS+VSC YR+IVR DP+FV YFR +TPELELG LNIGSRPAKRRPTGGVE+LRAIPWVF+WTQTRLNLPAWLGVGDAL+AVA K+ L MYA WPFF+TNIDLFEMI+AK+ IA YD +LV + K+LG ELRR + T +L VS N LI N +L+WQL LRNPY+DP+N+MQA +L +LR + + E+ L+DAL+LT+ GI+ GMRNTG
Sbjct: 676 PPQAWRDTMATLSDVSCTKYRNIVRHDPKFVGYFRASTPELELGALNIGSRPAKRRPTGGVETLRAIPWVFAWTQTRLNLPAWLGVGDALSAVA--KKDKATLQEMYAQWPFFRTNIDLFEMILAKASPSIAAIYDDQLVHTPDEKKLGEELRRDMAATVDAVLAVSGNTTLIEKNIMLQWQLLLRNPYVDPLNIMQAALLRKLRTEDYANDEEKHLLEDALVLTINGISAGMRNTG 910
BLAST of mRNA_Ecto-sp13_S_contig13101.2534.1 vs. uniprot
Match: A0A4D9DCS6_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DCS6_9STRA) HSP 1 Score: 279 bits (714), Expect = 4.210e-92 Identity = 136/229 (59.39%), Postives = 172/229 (75.11%), Query Frame = 1
Query: 43 MDTLSEVSCEAYRDIVRKDPRFVPYFRTATPELELGGLNIGSRPAKRRPTGGVESLRAIPWVFSWTQTRLNLPAWLGVGDALAAVASTKEGVENLSTMYATWPFFKTNIDLFEMIIAKSDTRIAEHYDSELVVDGEAKELGTELRRRLGETTAEILKVSENPELIAFNKLLRWQLALRNPYLDPVNVMQAHILHRLRNGKFGSPAEEQYLQDALILTVTGIAGGMRNTG 729
M LS + CE YR VR+DPRFVPYFR ATPE ELG NIGSRP KRRP GGVE+LRAIPWVFSWTQTRL+L AWLGVG+AL AV ++ E L+ MY WPF TN+DL +MI+AK+D IAE+YD LV D E K+LG ELR +L +TT +LK+S +L +N +L+W + LRN Y+DP+N++QAH+L RLR ++ S E+Q LQDAL++T+ GI+ GMRN+G
Sbjct: 1 MKELSSIGCEHYRATVRQDPRFVPYFRAATPEQELGSANIGSRPQKRRP-GGVETLRAIPWVFSWTQTRLHLSAWLGVGEALEAVMASPEHASTLAEMYKHWPFLHTNMDLVDMILAKADKEIAENYDHLLVSDPEQKKLGIELRAKLEDTTKAVLKLSGEQKLQQYNPVLQWAIVLRNAYVDPLNILQAHVLKRLRTEEYKSEEEKQRLQDALVVTINGISAGMRNSG 228
BLAST of mRNA_Ecto-sp13_S_contig13101.2534.1 vs. uniprot
Match: A0A7S3H8Y1_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H8Y1_9STRA) HSP 1 Score: 275 bits (704), Expect = 8.740e-88 Identity = 141/250 (56.40%), Postives = 176/250 (70.40%), Query Frame = 1
Query: 1 FEPPAVPTEQFRATMDTLSEVSCEAYRDIVRKDPRFVPYFRTATPELELGGLNIGSRPAKRRPTGGVESLRAIPWVFSWTQTRLNLPAWLGVGDALAAVASTKEGVENLSTMYATWPFFKTNIDLFEMIIAKSDTRIAEHYDSELVVDGEAKELGTELRRRLGETTAEILKVSENPELIAFNKLLRWQLALRNPYLDPVNVMQAHILHRLRNGKFGSPAEEQY-------LQDALILTVTGIAGGMRNTG 729
F P + A MD LS +SC+AYR IVR+DPRFVPYFRT TPELEL GLN+GSRP KR P GGVESLRAIPWVF+WTQTRLNLP WLGVG+AL T + L MY WP+F+T IDL EM++ KSD+ IA +YD++LV D E+ LG ELR +L ET +L++S +P L + N +L LA+RNPY+DP+NV+QA +L RLR G E++Y LQDAL++T+ GIA GMRN+G
Sbjct: 189 FTPRPAIKPTWAAAMDRLSVISCDAYRAIVREDPRFVPYFRTTTPELELAGLNVGSRPGKRNPKGGVESLRAIPWVFAWTQTRLNLPTWLGVGEALNKELKTDPAL--LKEMYQDWPWFRTFIDLLEMVLVKSDSAIAANYDAQLVTDSESLALGKELRAKLDETAQALLEISGHPSLQSHNSVLLNSLAVRNPYVDPLNVIQAELLKRLRQGD----VEQRYTIEERATLQDALLITINGIANGMRNSG 432
BLAST of mRNA_Ecto-sp13_S_contig13101.2534.1 vs. uniprot
Match: W7TGA1_9STRA (Phosphoenolpyruvate carboxylase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TGA1_9STRA) HSP 1 Score: 288 bits (737), Expect = 1.110e-87 Identity = 141/243 (58.02%), Postives = 179/243 (73.66%), Query Frame = 1
Query: 1 FEPPAVPTEQFRATMDTLSEVSCEAYRDIVRKDPRFVPYFRTATPELELGGLNIGSRPAKRRPTGGVESLRAIPWVFSWTQTRLNLPAWLGVGDALAAVASTKEGVENLSTMYATWPFFKTNIDLFEMIIAKSDTRIAEHYDSELVVDGEAKELGTELRRRLGETTAEILKVSENPELIAFNKLLRWQLALRNPYLDPVNVMQAHILHRLRNGKFGSPAEEQYLQDALILTVTGIAGGMRNTG 729
F+ P P E +R M LS + CE YR VR+DPRFVPYFR ATPE ELG NIGSRP KRRP GGVE+LRAIPWVFSWTQTRL+L AWLGVG+AL AV ++ E L+ MY WPF TN+DL +MI+AK+D IAE+YD LV D E K+LG ELR +L +TT +LK+S +L +N +L+W + LRN Y+DP+N++QAH+L RLR ++ S E+Q LQDAL++T+ GI+ GMRN+G
Sbjct: 720 FQEPVNPPEAWRQVMKELSSIGCEHYRATVRQDPRFVPYFRAATPEQELGSANIGSRPQKRRP-GGVETLRAIPWVFSWTQTRLHLSAWLGVGEALEAVMASPEHASTLAEMYKHWPFLHTNMDLVDMILAKADKEIAENYDHLLVSDPEQKKLGIELRAKLEDTTKAVLKLSGEQKLQQYNPVLQWAIVLRNAYVDPLNILQAHVLKRLRTEEYKSEDEKQRLQDALVVTINGISAGMRNSG 961
BLAST of mRNA_Ecto-sp13_S_contig13101.2534.1 vs. uniprot
Match: A0A482T9M5_9ARCH (Phosphoenolpyruvate carboxylase n=1 Tax=archaeon TaxID=1906665 RepID=A0A482T9M5_9ARCH) HSP 1 Score: 265 bits (678), Expect = 7.430e-80 Identity = 132/243 (54.32%), Postives = 175/243 (72.02%), Query Frame = 1
Query: 1 FEPPAVPTEQFRATMDTLSEVSCEAYRDIVRKDPRFVPYFRTATPELELGGLNIGSRPAKRRPTGGVESLRAIPWVFSWTQTRLNLPAWLGVGDALAAVASTKEGVENLSTMYATWPFFKTNIDLFEMIIAKSDTRIAEHYDSELVVDGEAKELGTELRRRLGETTAEILKVSENPELIAFNKLLRWQLALRNPYLDPVNVMQAHILHRLRNGKFGSPAEEQYLQDALILTVTGIAGGMRNTG 729
F PA+ E ++ M+ ++++SC YR +VR + RFVPYFRTATPE EL GLN+GSRP+KR P GGV+SLRAIPWVFSWTQTRLNLPAWLGVG+AL KE E + M A WP+F+T ID+ EMI+ KS+T+IAE+YD +LV D +++ LG ELR ++ T +L+VS +P L A N +L L +RNPY+DP+N++QA +L RLR S E LQD L++T+ G+A GMRN+G
Sbjct: 612 FNRPAIKPE-WKEMMEKMADISCGVYRGVVRGEERFVPYFRTATPESELAGLNVGSRPSKRNPQGGVDSLRAIPWVFSWTQTRLNLPAWLGVGEALTTCY--KEHPEVMKDMAANWPWFRTLIDMLEMILVKSETKIAENYDKQLVSDAKSQALGQELREKMKFTADAVLQVSGSPYLQANNPMLLRSLLVRNPYVDPLNIIQAEVLKRLRTTSGLSEPERTVLQDTLLITINGVANGMRNSG 851
BLAST of mRNA_Ecto-sp13_S_contig13101.2534.1 vs. uniprot
Match: A0A7S0CA55_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CA55_9STRA) HSP 1 Score: 250 bits (638), Expect = 2.080e-78 Identity = 129/249 (51.81%), Postives = 171/249 (68.67%), Query Frame = 1
Query: 19 PTEQFRATMDTLSEVSCEAYRDIVRKDPRFVPYFRTATPELELGGLNIGSRPAKRRPTGGVESLRAIPWVFSWTQTRLNLPAWLGVGDALAAVASTKEGVENLSTMYATWPFFKTNIDLFEMIIAKSDTRIAEHYDSELVVDGEAKELGTELRRRLGETTAEILKVSENPELIAFNKLLRWQLALRNPYLDPVNVMQAHILHRLRNGKFGSPA------------EEQYLQDALILTVTGIAGGMRNTG 729
PTE++R M+ LSE SC AYRDIVR D RFVPYFR ATPE+EL LNIGSRPAKR+ +GGVESLRAIPW+F+WTQTR LP WLGVG+A++ V + + + L MY W F+T IDL EM+++KS+ I EHY++ LV D E+K LG E+RR+ T +L+++ + EL N+LL+ L +RNPY+D +N++Q L RLR G G E++ L+D L++T+TGIA GM NTG
Sbjct: 141 PTEEWREMMNRLSETSCRAYRDIVRGDERFVPYFRAATPEMELADLNIGSRPAKRKASGGVESLRAIPWIFAWTQTRSMLPTWLGVGEAISEVLQSDDA-DKLRIMYRDWDSFRTTIDLVEMVLSKSEPSITEHYENMLVSDSESKALGVEVRRKHEVTEQAVLELTGHKELSESNELLKRLLKVRNPYVDCLNMLQVETLKRLR-GVTGDDTIEPVTCDNNEKDEKELLKDTLLITITGIANGMGNTG 387 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13101.2534.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig13101.2534.1 >prot_Ecto-sp13_S_contig13101.2534.1 ID=prot_Ecto-sp13_S_contig13101.2534.1|Name=mRNA_Ecto-sp13_S_contig13101.2534.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=244bp FEPPAVPTEQFRATMDTLSEVSCEAYRDIVRKDPRFVPYFRTATPELELGback to top mRNA from alignment at Ecto-sp13_S_contig13101:121..3976+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig13101.2534.1 ID=mRNA_Ecto-sp13_S_contig13101.2534.1|Name=mRNA_Ecto-sp13_S_contig13101.2534.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3856bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13101:121..3976+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig13101:121..3976+ >mRNA_Ecto-sp13_S_contig13101.2534.1 ID=mRNA_Ecto-sp13_S_contig13101.2534.1|Name=mRNA_Ecto-sp13_S_contig13101.2534.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=732bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13101:121..3976+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |