mRNA_Ecto-sp13_S_contig13099.2530.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig13099.2530.1
Unique NamemRNA_Ecto-sp13_S_contig13099.2530.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig13099.2530.1 vs. uniprot
Match: D7G474_ECTSI (Agmatine deiminase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G474_ECTSI)

HSP 1 Score: 527 bits (1357), Expect = 3.310e-187
Identity = 252/261 (96.55%), Postives = 256/261 (98.08%), Query Frame = 1
Query:    4 RTWMLWPVRPDTWKESARPAQLAFAAVAKAIARFEPVTVGVPSSQLQSAQPLLDATGVGIAVIEQDDAWIRDTGPTFVVGGTRIESSERQRGMRNVRGVDWSFNAWGGEFGGCFSNWDKDDAIASTVLGLVGADRYKANMVLEGGSVHVDGEGTVITTEECLLNPNRNPTFTKDEIEKYLREYLGAKLVLWLGQGVTGDVDTDGHVDNLVAFVRPGEVVLHWTDDAEDPQHAVSLDALRRLEAFIDARGRQLKVHKCPLPG 786
            RTWMLWPVRPDTWKESARPAQLAFAAVAKAIARFEPVTVGVPSSQLQSAQPLLDATG+GIAVIEQDDAWIRDTGPTFVVGGTR ESSERQRGMRNVRGVDWSFNAWGGEFGGCFSNWDKDDAIASTVLGLVGADRYKANMVLEGGSVHVDGEGTVITTEECLLNPNRNPTFTK EIEK+LR+YLG KLVLWLGQGVTGDVDTDGHVDNLVAFV PGEVVLHWTD+ EDPQHAVSLDALRRLEAFIDARGRQLKVHKCPLPG
Sbjct:   31 RTWMLWPVRPDTWKESARPAQLAFAAVAKAIARFEPVTVGVPSSQLQSAQPLLDATGIGIAVIEQDDAWIRDTGPTFVVGGTRSESSERQRGMRNVRGVDWSFNAWGGEFGGCFSNWDKDDAIASTVLGLVGADRYKANMVLEGGSVHVDGEGTVITTEECLLNPNRNPTFTKSEIEKHLRDYLGVKLVLWLGQGVTGDVDTDGHVDNLVAFVHPGEVVLHWTDNTEDPQHAVSLDALRRLEAFIDARGRQLKVHKCPLPG 291          
BLAST of mRNA_Ecto-sp13_S_contig13099.2530.1 vs. uniprot
Match: A0A6H5JHS9_9PHAE (AIH protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHS9_9PHAE)

HSP 1 Score: 307 bits (786), Expect = 2.000e-103
Identity = 161/215 (74.88%), Postives = 163/215 (75.81%), Query Frame = 1
Query:   13 MLWPVRPDTWKESARPAQLAFAAVAKAIARFEPVTVGVPSSQLQSAQPLLDATGVGIAVIEQDDAWIRDTGPTFVVGGTRIESSERQRGMRNVRGVDWSFNAWGGEFGGCFSNWDKDDAIASTVLGLVGADRYKANMVLEGGSVHVDGEGTVITTEECLLNPNRNPTFTKDEIEKYLREYLGAKLVLWLGQGVTGDVDTDGHVDNLVAFVRPGEV 657
            MLWPVRPDTWKESARPAQLAFAAVAKAIARFEPVTVGVPSSQLQSAQPLLDATGV IAVIEQDDAWIRDTGPTFVVGGTRIESSERQRGMRNVRGVDWSFNAWGGEFGGCFS+WDKDDAIASTVLGL+GADRYKANMVLEG                                                   VTGDVDTDGHVDNLVAFVRPGEV
Sbjct:    1 MLWPVRPDTWKESARPAQLAFAAVAKAIARFEPVTVGVPSSQLQSAQPLLDATGVDIAVIEQDDAWIRDTGPTFVVGGTRIESSERQRGMRNVRGVDWSFNAWGGEFGGCFSSWDKDDAIASTVLGLIGADRYKANMVLEG---------------------------------------------------VTGDVDTDGHVDNLVAFVRPGEV 164          
BLAST of mRNA_Ecto-sp13_S_contig13099.2530.1 vs. uniprot
Match: A0A2P6V231_9CHLO (Agmatine deiminase n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6V231_9CHLO)

HSP 1 Score: 309 bits (791), Expect = 4.520e-101
Identity = 147/260 (56.54%), Postives = 190/260 (73.08%), Query Frame = 1
Query:    4 RTWMLWPVRPDTWKESARPAQLAFAAVAKAIARFEPVTVGVPSSQLQSAQPLLDATGVGIAVIEQDDAWIRDTGPTFVVGGTRIESSERQRGMRNVRGVDWSFNAWGGEFGGCFSNWDKDDAIASTVLGLVGADRYKANMVLEGGSVHVDGEGTVITTEECLLNPNRNPTFTKDEIEKYLREYLGAKLVLWLGQGVTGDVDTDGHVDNLVAFVRPGEVVLHWTDDAEDPQHAVSLDALRRLEAFIDARGRQLKVHKCPLP 783
            RTWM WP RPD W++   PAQ AFAAVA AIA+FEPVTV    +Q+ +A+ +L A+ V +  I QDDAW+RDTGPTFV+   R E+S    G R++ G+DW FNAWGG  GG ++ W++D A+A+TVL    A R+   +V+EGGS+H DGEGT++TTEECLLNPNRNP+ ++DEIE +LR  LG + V+WL +G+ GD DT+GH+DN   F RPG V+L WTDDA DPQH +S++ALR L    DA+GRQLKV K P P
Sbjct:   39 RTWMGWPERPDNWRQGGAPAQRAFAAVAAAIAQFEPVTVAANEAQVANARAMLPAS-VEVVCIPQDDAWLRDTGPTFVL---REEAS----GQRSLGGIDWVFNAWGGGEGGMYATWERDQAVAATVLQAASARRFACPIVMEGGSLHADGEGTLLTTEECLLNPNRNPSLSRDEIEGWLRRMLGVQKVIWLPRGLCGDDDTNGHIDNFACFARPGTVLLAWTDDASDPQHEISVEALRVLSQATDAKGRQLKVVKVPCP 290          
BLAST of mRNA_Ecto-sp13_S_contig13099.2530.1 vs. uniprot
Match: A0A078MFJ6_9PSED (Agmatine deiminase n=2 Tax=Pseudomonadaceae TaxID=135621 RepID=A0A078MFJ6_9PSED)

HSP 1 Score: 304 bits (778), Expect = 1.480e-99
Identity = 147/262 (56.11%), Postives = 179/262 (68.32%), Query Frame = 1
Query:    4 RTWMLWPVRPDTWKESARPAQLAFAAVAKAIARFEPVTVGVPSSQLQSAQPLLDATGVGIAVIEQDDAWIRDTGPTFVVGGTRIESSERQRGMRNVRGVDWSFNAWGGEFGGCFSNWDKDDAIASTVLGLVGADRYKAN-MVLEGGSVHVDGEGTVITTEECLLNPNRNPTFTKDEIEKYLREYLGAKLVLWLGQGVTGDVDTDGHVDNLVAFVRPGEVVLHWTDDAEDPQHAVSLDALRRLEAFIDARGRQLKVHKCPLPG 786
            +TWM+WP RPD W+ +  PAQ AFA VAKAIA FEPVTVGV ++Q   A  LLD   + +  +  DDAW+RDTGPTFV  G              +RGVDW+FNAWGG  GG +S WD+DD +A  +LGL    RY+    VLEGG++HVDGEGT+ITTEECLLN NRNP   + EIE+ LREYLG   ++WL +G+  D +TDGHVDN   FVRPGEV+L WTDD  DP HA    ALR LE   DA+GR+L VH+ P+PG
Sbjct:   24 QTWMIWPERPDNWRLAGEPAQAAFAEVAKAIASFEPVTVGVSAAQYARANQLLDHPAIRVVELSSDDAWVRDTGPTFVTNG-----------QGGLRGVDWTFNAWGGLDGGLYSPWDRDDQVADKILGLERCPRYRTEGFVLEGGAIHVDGEGTLITTEECLLNSNRNPHLQRHEIEQMLREYLGVDSIIWLPEGLYND-ETDGHVDNFCCFVRPGEVLLAWTDDDSDPNHARCQAALRVLETTRDAQGRELVVHRMPIPG 273          
BLAST of mRNA_Ecto-sp13_S_contig13099.2530.1 vs. uniprot
Match: A0A534D6J5_9GAMM (Putative agmatine deiminase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A534D6J5_9GAMM)

HSP 1 Score: 303 bits (775), Expect = 6.160e-99
Identity = 150/259 (57.92%), Postives = 182/259 (70.27%), Query Frame = 1
Query:   10 WMLWPVRPDTWKESARPAQLAFAAVAKAIARFEPVTVGVPSSQLQSAQPLLDATGVGIAVIEQDDAWIRDTGPTFVVGGTRIESSERQRGMRNVRGVDWSFNAWGGEFGGCFSNWDKDDAIASTVLGLVGADRYKANMVLEGGSVHVDGEGTVITTEECLLNPNRNPTFTKDEIEKYLREYLGAKLVLWLGQGVTGDVDTDGHVDNLVAFVRPGEVVLHWTDDAEDPQHAVSLDALRRLEAFIDARGRQLKVHKCPLPG 786
            WMLWP RPD W+E+ARPAQLAFA VA AIARFEPVTVGV +    +A+ LL A  V +  +  DDAW+RD GPT VV G         RG   VRGVDW FNAWGG  GG +  WD+DD +A  VL +   DRY+A +V EGG++HVDG+GT + TEECLLN NRNP   +++IE+ LR+YLG   ++WLG+GV  D +TDGH+DNL  FVRPGEV L WTD   DPQHA+S DA  RL    DARGR+LKV + P+PG
Sbjct:   27 WMLWPERPDNWREAARPAQLAFAQVAAAIARFEPVTVGVSNPHYTAARALLPAD-VRVVEMAHDDAWMRDVGPTCVVDG---------RGT--VRGVDWRFNAWGGLAGGLYFPWDQDDLVARKVLEIERLDRYRAALVNEGGAIHVDGDGTAMVTEECLLNANRNPRLAREDIERCLRDYLGVSHMIWLGRGVFND-ETDGHIDNLACFVRPGEVCLTWTDRRRDPQHAISFDAWERLHEARDARGRRLKVQRLPMPG 272          
BLAST of mRNA_Ecto-sp13_S_contig13099.2530.1 vs. uniprot
Match: A0A7U7I7N6_9PSED (Agmatine deiminase n=2 Tax=Pseudomonas TaxID=286 RepID=A0A7U7I7N6_9PSED)

HSP 1 Score: 302 bits (774), Expect = 6.560e-99
Identity = 150/262 (57.25%), Postives = 184/262 (70.23%), Query Frame = 1
Query:    4 RTWMLWPVRPDTWKESARPAQLAFAAVAKAIARFEPVTVGVPSSQLQSAQPLLDATGVGIAVIEQDDAWIRDTGPTFVVGGTRIESSERQRGMRNVRGVDWSFNAWGGEFGGCFSNWDKDDAIASTVLGLVGADRYKAN-MVLEGGSVHVDGEGTVITTEECLLNPNRNPTFTKDEIEKYLREYLGAKLVLWLGQGVTGDVDTDGHVDNLVAFVRPGEVVLHWTDDAEDPQHAVSLDALRRLEAFIDARGRQLKVHKCPLPG 786
            +TWM+WP RPD W+   +PAQ AF AVAKAIARFEPVTV V + Q ++A+  LDA  + +  I  DDAW+RDTGPTFVV        +RQ G   VRGVDW+FNAWGG  GG ++NW +DD +AS +L +   DRY+    VLEGGS+HVDGEGT+ITTEECLLN NRNP  +++EIE  LRE+L    V+WL  G+  D +TDGHVDN   +VRPGEV+L WTDD  DP H     A+R LE   DA+GRQL VHK P+PG
Sbjct:   24 QTWMVWPERPDNWRLGGKPAQAAFTAVAKAIARFEPVTVCVSAGQYENARARLDADNIRVVEITTDDAWVRDTGPTFVV--------DRQGG---VRGVDWTFNAWGGLDGGLYANWVRDDQVASKILEIERCDRYRTEGFVLEGGSIHVDGEGTLITTEECLLNRNRNPHLSREEIEAVLREHLAIDTVIWLPDGLFND-ETDGHVDNFCCYVRPGEVLLAWTDDPADPNHPRCQAAMRVLETARDAKGRQLVVHKMPIPG 273          
BLAST of mRNA_Ecto-sp13_S_contig13099.2530.1 vs. uniprot
Match: A0A2W4M3D4_9PROT (Putative agmatine deiminase n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4M3D4_9PROT)

HSP 1 Score: 302 bits (773), Expect = 1.160e-98
Identity = 151/259 (58.30%), Postives = 180/259 (69.50%), Query Frame = 1
Query:   10 WMLWPVRPDTWKESARPAQLAFAAVAKAIARFEPVTVGVPSSQLQSAQPLLDATGVGIAVIEQDDAWIRDTGPTFVVGGTRIESSERQRGMRNVRGVDWSFNAWGGEFGGCFSNWDKDDAIASTVLGLVGADRYKANMVLEGGSVHVDGEGTVITTEECLLNPNRNPTFTKDEIEKYLREYLGAKLVLWLGQGVTGDVDTDGHVDNLVAFVRPGEVVLHWTDDAEDPQHAVSLDALRRLEAFIDARGRQLKVHKCPLPG 786
            WMLWP RPD W+  A+PAQ AFAAVA AIA  EPVTVGV   Q  +A+ +L  T V +  +  DDAW+RD GPTFVV          +RG R  RGVDW FNAWGG  GG +  WD+D  +A  VL + G DRY+A  VLEGG++HVDG+GT++TTEECLLNPNRNP   + ++E  L EYLG   V+WLG+GV  D +TDGH+DNL  FVRPGEV L WTDD  DPQ+ +SLDA  RL    DARGR+LKVHK P PG
Sbjct:   27 WMLWPERPDNWRLGAKPAQQAFAAVAAAIATGEPVTVGVSGRQFVNARAMLPET-VRVVELSSDDAWMRDVGPTFVVD---------RRGER--RGVDWGFNAWGGIAGGLYFPWDQDALVARKVLEVEGCDRYRAPFVLEGGAIHVDGQGTLLTTEECLLNPNRNPQLDRGQLEILLHEYLGVTHVIWLGKGVVDD-ETDGHIDNLCCFVRPGEVALTWTDDKRDPQYRISLDAYERLMEARDARGRRLKVHKLPQPG 272          
BLAST of mRNA_Ecto-sp13_S_contig13099.2530.1 vs. uniprot
Match: A0A1H6AT50_9GAMM (Putative agmatine deiminase n=2 Tax=Marinobacterium TaxID=48075 RepID=A0A1H6AT50_9GAMM)

HSP 1 Score: 301 bits (771), Expect = 1.540e-98
Identity = 144/260 (55.38%), Postives = 178/260 (68.46%), Query Frame = 1
Query:    4 RTWMLWPVRPDTWKESARPAQLAFAAVAKAIARFEPVTVGVPSSQLQSAQPLLDATGVGIAVIEQDDAWIRDTGPTFVVGGTRIESSERQRGMRNVRGVDWSFNAWGGEFGGCFSNWDKDDAIASTVLGLVGADRYKANMVLEGGSVHVDGEGTVITTEECLLNPNRNPTFTKDEIEKYLREYLGAKLVLWLGQGVTGDVDTDGHVDNLVAFVRPGEVVLHWTDDAEDPQHAVSLDALRRLEAFIDARGRQLKVHKCPLP 783
            R WM+WP R D W++ A PAQ AF AVAKAIA FEPVTVG  +SQ   AQ  LD  G+ +  I  DDAW RDTGPTFV  G            + VR VDW FNAWGGE GG +++WDKD+ +A+ +  + G DRY A+ VLEGGS+HVDGEGT+ITTEECLLNPNRNP  ++ ++E+ L +YLG   V+WL +G+  D +TDGHVDN   FV PGE+VL WTDD  +P +     AL  +E   DA+GR+LKVHK PLP
Sbjct:   23 RVWMIWPERTDNWRDGAVPAQQAFTAVAKAIAEFEPVTVGASASQYDRAQLALDYPGISVVEISSDDAWARDTGPTFVSNG------------KTVRAVDWRFNAWGGENGGLYASWDKDERVAAKMAAVAGCDRYAADFVLEGGSIHVDGEGTLITTEECLLNPNRNPHLSRADLEQLLGDYLGVSKVIWLPEGLYND-ETDGHVDNCCCFVAPGELVLAWTDDPANPNYERCRAALAVIEQSRDAKGRELKVHKMPLP 269          
BLAST of mRNA_Ecto-sp13_S_contig13099.2530.1 vs. uniprot
Match: A0A537YNC7_9ACTN (Putative agmatine deiminase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A537YNC7_9ACTN)

HSP 1 Score: 301 bits (771), Expect = 1.810e-98
Identity = 151/259 (58.30%), Postives = 184/259 (71.04%), Query Frame = 1
Query:   10 WMLWPVRPDTWKESARPAQLAFAAVAKAIARFEPVTVGVPSSQLQSAQPLLDATGVGIAVIEQDDAWIRDTGPTFVVGGTRIESSERQRGMRNVRGVDWSFNAWGGEFGGCFSNWDKDDAIASTVLGLVGADRYKANMVLEGGSVHVDGEGTVITTEECLLNPNRNPTFTKDEIEKYLREYLGAKLVLWLGQGVTGDVDTDGHVDNLVAFVRPGEVVLHWTDDAEDPQHAVSLDALRRLEAFIDARGRQLKVHKCPLPG 786
            WM WP RPD W+  A+PAQ A+AAVA AIA  EPVT+ V  +Q ++ + LL A  V +  I  DDAWIRD GPTFV+G           G R  RGVDW FNAWGG  GG +  WD+D+ +A+ VL + G DRY+A +VLEGG++HVDGEGTV+TTEECLLNPNRNP  +K++IE+ L EYLGA+ VLWLG GV  D +TDGHVDNL  F  PG+V+L W+DD +DPQHA+S DA  RLEA  DARGR L+V   P PG
Sbjct:   27 WMAWPERPDNWRLGAKPAQEAYAAVAAAIAESEPVTMAVSDAQFENCRALLPAE-VRVVEISSDDAWIRDHGPTFVIGA----------GGR--RGVDWHFNAWGGTDGGLYFPWDRDERVAAKVLEIEGDDRYRAPIVLEGGAIHVDGEGTVLTTEECLLNPNRNPDLSKEQIERVLLEYLGAEKVLWLGAGVFED-ETDGHVDNLACFAAPGKVLLTWSDDEDDPQHAISHDARERLEAATDARGRSLEVVFLPSPG 271          
BLAST of mRNA_Ecto-sp13_S_contig13099.2530.1 vs. uniprot
Match: A0A1I4PGT0_9PSED (Agmatine deiminase n=1 Tax=Pseudomonas yangmingensis TaxID=1720063 RepID=A0A1I4PGT0_9PSED)

HSP 1 Score: 301 bits (770), Expect = 2.410e-98
Identity = 147/263 (55.89%), Postives = 181/263 (68.82%), Query Frame = 1
Query:    1 LRTWMLWPVRPDTWKESARPAQLAFAAVAKAIARFEPVTVGVPSSQLQSAQPLLDATGVGIAVIEQDDAWIRDTGPTFVVGGTRIESSERQRGMRNVRGVDWSFNAWGGEFGGCFSNWDKDDAIASTVLGLVGADRYKAN-MVLEGGSVHVDGEGTVITTEECLLNPNRNPTFTKDEIEKYLREYLGAKLVLWLGQGVTGDVDTDGHVDNLVAFVRPGEVVLHWTDDAEDPQHAVSLDALRRLEAFIDARGRQLKVHKCPLPG 786
            ++TWMLWP RPD W+  A+PAQ AFA VA+AIA FEPVTVGV ++Q  +A   LD  G+ +  +  DDAW+RDTGPTFVV G              +RGVDW+FNAWGG  GG +  W +DD +A  +L L    RY+    VLEGG+ HVDGEGT+ITTEECLLN NRNP   ++EIE  L +YLG   V+WL QG+  D +TDGHVDN   FVRPGEV+L WTDD +DP HA    ALR L+A  DARGR+L+VH+ P+PG
Sbjct:   23 VQTWMLWPERPDNWRLGAKPAQAAFAEVARAIAGFEPVTVGVSAAQYGNASSQLDHPGIRVVELSSDDAWVRDTGPTFVVNG-----------QGGLRGVDWTFNAWGGFNGGLYWPWQRDDQVAGKILSLERCPRYRTEGFVLEGGAFHVDGEGTLITTEECLLNANRNPQLLREEIELKLADYLGIDKVIWLPQGLYND-ETDGHVDNFCCFVRPGEVLLAWTDDPDDPNHARCQTALRVLQASRDARGRELQVHRMPIPG 273          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13099.2530.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G474_ECTSI3.310e-18796.55Agmatine deiminase n=1 Tax=Ectocarpus siliculosus ... [more]
A0A6H5JHS9_9PHAE2.000e-10374.88AIH protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
A0A2P6V231_9CHLO4.520e-10156.54Agmatine deiminase n=1 Tax=Micractinium conductrix... [more]
A0A078MFJ6_9PSED1.480e-9956.11Agmatine deiminase n=2 Tax=Pseudomonadaceae TaxID=... [more]
A0A534D6J5_9GAMM6.160e-9957.92Putative agmatine deiminase n=1 Tax=Gammaproteobac... [more]
A0A7U7I7N6_9PSED6.560e-9957.25Agmatine deiminase n=2 Tax=Pseudomonas TaxID=286 R... [more]
A0A2W4M3D4_9PROT1.160e-9858.30Putative agmatine deiminase n=1 Tax=Proteobacteria... [more]
A0A1H6AT50_9GAMM1.540e-9855.38Putative agmatine deiminase n=2 Tax=Marinobacteriu... [more]
A0A537YNC7_9ACTN1.810e-9858.30Putative agmatine deiminase n=1 Tax=Actinomycetia ... [more]
A0A1I4PGT0_9PSED2.410e-9855.89Agmatine deiminase n=1 Tax=Pseudomonas yangmingens... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13099contigEcto-sp13_S_contig13099:3..3623 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score516.9
Seed ortholog evalue5.3e-144
Seed eggNOG ortholog2880.D7G474
Model size786
KEGG rclassRC00177
KEGG koko:K10536
KEGG ReactionR01416
KEGG Pathwayko00330,ko01100,map00330,map01100
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0006576,GO:0006595,GO:0006596,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009308,GO:0009309,GO:0009987,GO:0016787,GO:0016810,GO:0016813,GO:0034641,GO:0042401,GO:0044106,GO:0044237,GO:0044249,GO:0044271,GO:0047632,GO:0071704,GO:1901564,GO:1901566,GO:1901576
Exons5
EggNOG free text desc.Porphyromonas-type peptidyl-arginine deiminase
EggNOG OGs2QUHM@2759,COG2957@1
Ec32 ortholog descriptionagmatine deiminase
Ec32 orthologEc-02_001540.1
EC3.5.3.12
Cds size774
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13099.2530.1prot_Ecto-sp13_S_contig13099.2530.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig13099 3..3611 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462701.5694005-CDS-Ecto-sp13_S_contig13099:2..261681462701.5694005-CDS-Ecto-sp13_S_contig13099:2..26Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13099 3..26 -
1681462701.5813408-CDS-Ecto-sp13_S_contig13099:1904..20121681462701.5813408-CDS-Ecto-sp13_S_contig13099:1904..2012Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13099 1905..2012 -
1681462701.5901084-CDS-Ecto-sp13_S_contig13099:2567..27181681462701.5901084-CDS-Ecto-sp13_S_contig13099:2567..2718Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13099 2568..2718 -
1681462701.6077695-CDS-Ecto-sp13_S_contig13099:2967..30381681462701.6077695-CDS-Ecto-sp13_S_contig13099:2967..3038Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13099 2968..3038 -
1681462701.623354-CDS-Ecto-sp13_S_contig13099:3191..36111681462701.623354-CDS-Ecto-sp13_S_contig13099:3191..3611Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13099 3192..3611 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462701.6410568-UTR-Ecto-sp13_S_contig13099:3611..36231681462701.6410568-UTR-Ecto-sp13_S_contig13099:3611..3623Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig13099 3612..3623 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig13099.2530.1

>prot_Ecto-sp13_S_contig13099.2530.1 ID=prot_Ecto-sp13_S_contig13099.2530.1|Name=mRNA_Ecto-sp13_S_contig13099.2530.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=258bp
MLWPVRPDTWKESARPAQLAFAAVAKAIARFEPVTVGVPSSQLQSAQPLL
DATGVGIAVIEQDDAWIRDTGPTFVVGGTRIESSERQRGMRNVRGVDWSF
NAWGGEFGGCFSNWDKDDAIASTVLGLVGADRYKANMVLEGGSVHVDGEG
TVITTEECLLNPNRNPTFTKDEIEKYLREYLGAKLVLWLGQGVTGDVDTD
GHVDNLVAFVRPGEVVLHWTDDAEDPQHAVSLDALRRLEAFIDARGRQLK
VHKCPLPG
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mRNA from alignment at Ecto-sp13_S_contig13099:3..3623-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig13099.2530.1 ID=mRNA_Ecto-sp13_S_contig13099.2530.1|Name=mRNA_Ecto-sp13_S_contig13099.2530.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3621bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13099:3..3623- (Ectocarpus species13 EcNAP12_S_4_19m)
CTCAGAACCTGGATGCTGTGGCCGGTGCGACCAGACACTTGGAAAGAGTC TGCACGTCCAGCCCAACTCGCTTTCGCCGCAGTGGCAAAGGCGATCGCGC GGTTCGAGCCAGTGACAGTCGGCGTTCCTTCGAGCCAGTTGCAATCAGCG CAGCCTCTACTGGATGCAACGGGCGTTGGCATTGCAGTGATTGAACAAGA CGATGCTTGGATCCGAGATACAGGACCTACATTCGTGGTCGGTGGTACCC GTATTGAAAGCTCGGAACGGCAGCGCGGAATGCGAAATGTTCGGGGCGTG GATTGGTCCTTCAACGCGTGGGGGGGCGAGTTTGGGGGTTGCTTCTCGAA CTGGGACAAGGACGACGCTATTGCAAGTACGGTGCTGGGGCTTGTTGGCG CTGATCGCTACAAGGCAAACATGGTTTTGGAGGTAGTGTGCTGGAATGCA TTTGCGCCGACCGTCCCTGACAGGGATACTCGAGTTGTGTTGCAAAAAAG TCTCTTTTGTGAAGGGCGCATACAATCAGTATTTCTCCGTGTTCAAGTCG TGAAGCGCCGTTGACGTGTTCCCGTCTTGCATCAGGGGGGATCTGTCCAC GTCGATGGAGAAGGAACGGTTATCACCACGGAAGAATGCCTCCTCAACCC CAACAGGTGGGGCCTGCCCTTCTCCGGCACGGACGAAACATATATGCGGA GCATATAGGATAGCTCCCGAGTGTGAACCGAAGGCGGTCAAGATTGATGA GTATACTATCCATGTTCACAGTACCAAACAGCAGAGATACAGGTTTCTTG AGGCAGGCTGCGATGACGTACATCCCCGCAGGACTTGCCACTGTTTTGAC ACGTTTGAAGTTGACGGATGTTTTCGCCGTTTCTTGGTTTGTTTGTTTAT GCCAGAAACCCGACCTTCACGAAGGACGAGATTGAGAAGTACCTGAGGGA GTACCTTGGGGCGAAATTGGTGCTTTGGCTCGGGCAGGGAGTGACGGGCG ATGTTGATACCGATGGGCACGTCGACAATCTTGTCGCATTCGTGCGTCCT GGAGAGGTGATCGTTGTGGCAGGAAAGTTCTTCGTACGAGATTGGTGGTG ATTCCTTGCTCGCCACTGAGGTGTCTCAGGCAAGCGAAGGGCCTGGCTTG AGAAGGCCAAGCCTAACACACAAATGCCTGGGTCATGAGAAAGTACGCCA ATTATTGCTCGAGCCGAAATGTGTGTCATCCGTGAAGGCTCTGTGAAGGC TGCAACCCACGAAGGGAGATCGTCGGACACGCCTTGGACGATAGAGAAAC CAATACTTGTGCGGTCGTTGATGGCATCCCGCCGCACCCACCAGCCAGGA GTCGCTCGCTCGCCACCCGGTACATTTGATTCAATCCACTGCACGAGGGT TTGGTTTGGTTTGGTTTGGTTTGGTTGTCCGAAGGCACGGTGTGCTACAG CATTCCTTTGTTGACGTATTTGAATCGGAGATGGTAGAAGAATCATGTCG GCTGCTAATCATCATGCCTCACGTTGTTGACGGCAGGACGTGTGATTGTC CGAGCGGGGACCTCAATCATCTCCGTACCCGACTGATTCACCTTCTGTCG TTGCGCTGCAGGTAGTCCTGCACTGGACGGACGACGCTGAGGATCCGCAG CACGCCGTCTCTTTGGATGCTCTCAGAAGGCTGGAGGCATTTATAGATGC GAGAGGACGACAACTGAAGGTACAGTATTGAGTAATATCCATATTCCGCG GTGTCAAAAAACGAACATACGGCGGGGCAGTGGCATCGCATAGTAGGGCT CTCTTTAGTCTTGGTTTTCGAGTCCCCTGTGCGCACACTCGTGACAAAAA TTGTCGTGTTGATTCAGAACAACGATCAGATCGAACGTTCTTGGTTTTTG TTGTCATTGCGTTGACCACGTGAGCAATCGTTCTGACCGCCTCACTCGTT CAATGGCAAACACACGAATATCCGCAGTGAACTGAAACGAATTACATGTG CCAAGAAGTCGCAGCTTTCTTCAAGTGAAAACTTCCGGGAATCACAGAAA TGAAAACTGCAGATGAGGGCACGGACAACGCCGAAACTCACGTACAAGCG CCGTACAGTCGGAGAGATGGCACCGGTCAGGGAGATGGCACCGGGGTGCG CACATAACAACAAGAACGGCATGATTTAATTCGATTTACACACCGGGGTC GGTGAGATCAAACCAGGTGCGATCTCTCCAACCCCTAATCTAAGATTAAG ATTGAGGTCATTTTCAGCTGATTGCACGAAGTACAAATATGCATACGTGC GAACATTTTACCTTGCGGGGACGGTGTTAGCGTCACTCTCGCATGTACGT ATGCATGGTCGCGGTTCACGTGGGATGCCACTTGTTTGCATTTTTAAATT GGTATGGAAGTTGCCAACCGTATACTCCACCAAACACACGAACGTACAAG CCGCACCCTACCCCCCCTTATACAAACGCGAAACTATCGTACTGCTGCGT ACGTACTGGTATCCGTAGGGGAAGACCGAAACGAAAGCGGGAGACAACTG ATACCGTATGTAACAGTACCTCAGATGGAAACGACATATTTTGTTGTCGT CACGTCGTCACGCCATAGCCAACCTCCCACCAAACACAAGACCACTCGCT GCATGGAAAGCTGTTACGTACCAGCCTACGTTGCCGTTACCGGTTTGCTT CCAACCAGCAACAACGGTACCTACACGTTGGTTCCACTGATCAACAGCAT TGTCAACTAGCGATGTGTCGTAACTCCGTCTGCCTACACTGGTATCAGTA CTACGTACCGGTCGGGAAGATGGCACCGGAGTTCTTGCATACAACACCAT ACAACACCTGTGTGTACTTTATCGGGGATCGCACCAGTCGGAGAGATCGC ACCGGTCGGAGACATCGAGTCGGGGGTGCCTTGCAAAAGCTAAACGAAAC GATTTAATTGCATACCCGCACCGGGGTCGGAGAGATCGCACCGGTGTGCG ATGAAAAAACCGAGGAAGAACATCGGAAAAAATGATCGCACCCGGTGCCA TCTCTCCGAGTATTACGGTAGAAGTCATTGATCCGTTGAATCTGAAGTTG AGTCACCCCATACCTTAACCTTCGCCTGTACCCCTTGTTGACTTACATGG CCAGATCAGCATGTGTCTCAAGATGCCAATCGGAGCTTTGCGCAGATTTA GAGCAAGAGTTTGCGCAGAGTTAGAGCAAGAGTGTTACGAGGAAGGAATG CAAACATTGGGGAAACAGGCATCTACCACGACACGACACAGCAGTTAGAC AACGAAAGGAACAGTACCCATCGATGTCAACTCAAGCCGGAGTTCGAGGC TTCGTTTATACCAAGCTACTTCAAAGTACGTTGTTTCGCACGACTGGAAT CTGTACAACAGAAATACAACGTACCCTCAACATTTGGAGGTTTGTATGTC TGTAGCCGGGAAGCTGCTCGATAAAAGGAAGGCTCGGCAAGATTATAATA CAAATAGCCGAAATTCGTGTTGGTGACACGGTTATTAGTTCAAAGCAGTT GTATTGCACCGAATCTGAATGCCCACGTTCGTCCATGGTCAAAAAAGGTG CACAAGTGCCCTCTTCCGGGC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig13099:3..3623-

>mRNA_Ecto-sp13_S_contig13099.2530.1 ID=mRNA_Ecto-sp13_S_contig13099.2530.1|Name=mRNA_Ecto-sp13_S_contig13099.2530.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=774bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13099:3..3623- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCTGTGGCCGGTGCGACCAGACACTTGGAAAGAGTCTGCACGTCCAGC
CCAACTCGCTTTCGCCGCAGTGGCAAAGGCGATCGCGCGGTTCGAGCCAG
TGACAGTCGGCGTTCCTTCGAGCCAGTTGCAATCAGCGCAGCCTCTACTG
GATGCAACGGGCGTTGGCATTGCAGTGATTGAACAAGACGATGCTTGGAT
CCGAGATACAGGACCTACATTCGTGGTCGGTGGTACCCGTATTGAAAGCT
CGGAACGGCAGCGCGGAATGCGAAATGTTCGGGGCGTGGATTGGTCCTTC
AACGCGTGGGGGGGCGAGTTTGGGGGTTGCTTCTCGAACTGGGACAAGGA
CGACGCTATTGCAAGTACGGTGCTGGGGCTTGTTGGCGCTGATCGCTACA
AGGCAAACATGGTTTTGGAGGGGGGATCTGTCCACGTCGATGGAGAAGGA
ACGGTTATCACCACGGAAGAATGCCTCCTCAACCCCAACAGAAACCCGAC
CTTCACGAAGGACGAGATTGAGAAGTACCTGAGGGAGTACCTTGGGGCGA
AATTGGTGCTTTGGCTCGGGCAGGGAGTGACGGGCGATGTTGATACCGAT
GGGCACGTCGACAATCTTGTCGCATTCGTGCGTCCTGGAGAGGTAGTCCT
GCACTGGACGGACGACGCTGAGGATCCGCAGCACGCCGTCTCTTTGGATG
CTCTCAGAAGGCTGGAGGCATTTATAGATGCGAGAGGACGACAACTGAAG
GTGCACAAGTGCCCTCTTCCGGGC
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