prot_Ecto-sp13_S_contig13095.2529.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13095.2529.1
Unique Nameprot_Ecto-sp13_S_contig13095.2529.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length437
Homology
BLAST of mRNA_Ecto-sp13_S_contig13095.2529.1 vs. uniprot
Match: D7FNP3_ECTSI (Poly(A) binding protein, cytoplasmic 4-like n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNP3_ECTSI)

HSP 1 Score: 508 bits (1307), Expect = 8.670e-173
Identity = 274/306 (89.54%), Postives = 276/306 (90.20%), Query Frame = 0
Query:    1 MSVSIKRDRATGKNLGYGFVKLSSHQQARAAKEAMQGVELGGRRVRVGWAQKNTSLYVGGLEGGAITTEMLVREFARFGPLDKELTTIKPGAKFGFVKYRYRLHAEAAKKELNGRPAFDGLCPGLEIEWNSVESSAQASETAGSEKSTAEXXXXXXXXXXX----KEGGTGGRTRGSSQHVGGVGGAHSRHPRGEVSGHTVHVQFEGDQGHVSAVNEVMIRKCFTKWEPVVDIVIPASRFNGVSPGPRQLPRCWAFVHFPPTPDGERAAANAIKDLNGTTISELRVHCTMSRGGGTRTGSPWRKQG 302
            MSVSIKRDRATGKNLGYGFVKLSSHQ+ARAAKEAMQGVELGGRRVRVGWAQKNTSLYVGGLEGGAITTEMLVREFARFGPLDKELTTIKPGAKFGFVKYRYRLHAEAAKKELN RPAFDGLCP LEIEWNSVESSAQASETAGSEKSTA XXXXXXXXXXX    KE                   AHSRHPRGEVS HTVHVQFEGDQGHVSAVNEVMIRKCFTKWEPVVDIVIPASRFNGVSPGPRQLPRCWAFVHFPPTPDGERAAA+AIK LNGTTISELRVHCTMSRGG TR GSPWRKQG
Sbjct:  232 MSVSIKRDRATGKNLGYGFVKLSSHQEARAAKEAMQGVELGGRRVRVGWAQKNTSLYVGGLEGGAITTEMLVREFARFGPLDKELTTIKPGAKFGFVKYRYRLHAEAAKKELNERPAFDGLCPSLEIEWNSVESSAQASETAGSEKSTAXXXXXXXXXXXXXXXXKEXXXXXXXXXXXXXXXXXXXAHSRHPRGEVSSHTVHVQFEGDQGHVSAVNEVMIRKCFTKWEPVVDIVIPASRFNGVSPGPRQLPRCWAFVHFPPTPDGERAAADAIKGLNGTTISELRVHCTMSRGGSTRAGSPWRKQG 537          
BLAST of mRNA_Ecto-sp13_S_contig13095.2529.1 vs. uniprot
Match: A0A6H5L4J2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4J2_9PHAE)

HSP 1 Score: 510 bits (1313), Expect = 4.500e-172
Identity = 272/306 (88.89%), Postives = 273/306 (89.22%), Query Frame = 0
Query:    1 MSVSIKRDRATGKNLGYGFVKLSSHQQARAAKEAMQGVELGGRRVRVGWAQKNTSLYVGGLEGGAITTEMLVREFARFGPLDKELTTIKPGAKFGFVKYRYRLHAEAAKKELNGRPAFDGLCPGLEIEWNSVESSAQASETAGSEKSTAEXXXXXXXXXXX----KEGGTGGRTRGSSQHVGGVGGAHSRHPRGEVSGHTVHVQFEGDQGHVSAVNEVMIRKCFTKWEPVVDIVIPASRFNGVSPGPRQLPRCWAFVHFPPTPDGERAAANAIKDLNGTTISELRVHCTMSRGGGTRTGSPWRKQG 302
            MSVSIKRDRATGKNLGYGFVKLSSHQ+ARAAKEAMQGVELGGRRVRVGWAQKNTSLYVGGLEGGAITTEMLVREFARFGPLDKELTTIKPGAKFGFVKYRYRLHAEAAKKELN RPAFDGLCP LEIEWNSVESSAQASETAGSEKSTAE   XXXXXXXX    K                    AHSRHPRGEVS HTVHVQFEGDQGHVSAVNEVMIRKCFTKWEPVVDIVIPASRFNGVSPGPRQLPRCWAFVHFPPTPDGERAAANAIKDLNGTTISELRVHCTMSRGGGT  GSPW KQG
Sbjct:   95 MSVSIKRDRATGKNLGYGFVKLSSHQEARAAKEAMQGVELGGRRVRVGWAQKNTSLYVGGLEGGAITTEMLVREFARFGPLDKELTTIKPGAKFGFVKYRYRLHAEAAKKELNERPAFDGLCPSLEIEWNSVESSAQASETAGSEKSTAEDRTXXXXXXXXXXXXKXXXXXXXXXXXXXXXXXXXXAHSRHPRGEVSSHTVHVQFEGDQGHVSAVNEVMIRKCFTKWEPVVDIVIPASRFNGVSPGPRQLPRCWAFVHFPPTPDGERAAANAIKDLNGTTISELRVHCTMSRGGGTSAGSPWSKQG 400          
BLAST of mRNA_Ecto-sp13_S_contig13095.2529.1 vs. uniprot
Match: A0A7S0DL40_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DL40_9EUKA)

HSP 1 Score: 129 bits (323), Expect = 2.930e-29
Identity = 89/292 (30.48%), Postives = 132/292 (45.21%), Query Frame = 0
Query:    1 MSVSIKRDRATGKNLGYGFVKLSSHQQARAAKEAMQGVELGGRRVRVGWAQKNTSLYVGGLEGGAITTEMLVREFARFGPLDKELTTIKPGAKFGFVKYRYRLHAEAAKKELNGRPAFDGLCPGLEIEWNSVESSAQASETAGSEKSTAEXXXXXXXXXXXKEGGTGGRTRGSSQHVGGVGGAHSRHPRGEVSGHTVHVQFEGDQG----HVSAVNEVMIRKCFTKWEPVVDIVIPASRFNGVSPGPRQLPRCWAFVHFPPTPDGERAAANAIKDLNGTTISELRVHCTMSR 288
            ++V IKRDR T  NLGYGFV+  +H+QA  AK+A+ GVE+ GR++R GWAQ+NT+L+VG L+   I   +    F+R+G L  + T  K    FG VK++ R +AE AK ELNG+       P + + W                                                              V  H VHV+F+  +       S ++E +++K F ++  V+ + +P    N +        + + FVHF  T  GE +A  AI +L+GT I  L V C   R
Sbjct:  102 VNVDIKRDRVTNNNLGYGFVQFETHEQALKAKKALHGVEVSGRKIRTGWAQRNTTLFVGDLDN-TIDATVYRTAFSRYGNLVDDETYFKVDKGFGMVKFKTRENAETAKVELNGKRIGQSKRP-VRVIWGDT----------------------------------------------------------SVQKHCVHVKFDVGKEVKSIQESEISEDVLQKVFQEYGQVLTVNLPRHSDNTL--------KGYGFVHFEDTEKGEESAKKAIANLSGTKIGRLVVQCNYGR 325          
BLAST of mRNA_Ecto-sp13_S_contig13095.2529.1 vs. uniprot
Match: W7TSQ6_9STRA (Tia1 cytotoxic granule-associated rna binding protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TSQ6_9STRA)

HSP 1 Score: 129 bits (324), Expect = 1.130e-28
Identity = 92/291 (31.62%), Postives = 142/291 (48.80%), Query Frame = 0
Query:    3 VSIKRDRATGKNLGYGFVKLSSHQQARAAKEAMQGVELGGRRVRVGWAQKNTSLYVGGLEGGAITTEMLVREFARFGPLDKELTTIKPG--AKFGFVKYRYRLHAEAAKKELNGRPAFDGLCPGLEIEWNSVESSAQASETAGSEKSTAEXXXXXXXXXXXKEGGTGGRTRGSSQHVGGVGGAHSRHPRGEVSGHTVHVQFEGDQGHVSAVNEVMIRKCFTKWEPVVDIVIPASRFNGVSPGPRQLPRC---WAFVHFPPTPDGERAAANAIKDLNGTTISELRVHCTMSR 288
            V IKRD+ T +NLGYGFV++SSH+QA  AKE MQG ++ GRR+R+GWAQ+NT+L++G L+      E L R F  FG L    + ++ G   K+G VK+  R  AE A++E++GR   DG  P + + W+  ++  + +  +    S  +              G                   S  P      ++VHV FE D G  + V E +I   F  +  ++ +++P       S     +  C   + FVHF  +  G   A  AI+ L G  ++ +R+ C  SR
Sbjct:  134 VDIKRDKVTMRNLGYGFVQMSSHEQAAVAKERMQGADIQGRRIRIGWAQRNTTLFIGDLDEST-NVEDLHRTFGPFGLLYTNDSYLRQGKCGKYGSVKFMSRKDAETARREMHGRVLRDGTRP-IRVVWHHPQTITKKTGLSVPLPSNEQHSRELVHIPPPPPAGV----------------LVSSRP------YSVHVHFEAD-GMENLVTENLIYGLFAPFGQIIAVILPQGPGILCSDQNEDVSCCRRGYGFVHFTGSALGRLCAIEAIRTLQGEIVAGIRLQCAFSR 399          
BLAST of mRNA_Ecto-sp13_S_contig13095.2529.1 vs. uniprot
Match: A0A7S3Z8S4_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3Z8S4_9EUKA)

HSP 1 Score: 120 bits (301), Expect = 4.410e-26
Identity = 89/292 (30.48%), Postives = 132/292 (45.21%), Query Frame = 0
Query:    1 MSVSIKRDRATGKNLGYGFVKLSSHQQARAAKEAMQGVELGGRRVRVGWAQKNTSLYVGGLEGGAITTEMLVREFARFGPLDKELTTIKPGAKFGFVKYRYRLHAEAAKKELNGRPAFDGLCPGLEIEWNSVESSAQASETAGSEKSTAEXXXXXXXXXXXKEGGTGGRTRGSSQHVGGVGGAHSRHPRGEVSGHTVHVQFE-GDQGHV---SAVNEVMIRKCFTKWEPVVDIVIPASRFNGVSPGPRQLPRCWAFVHFPPTPDGERAAANAIKDLNGTTISELRVHCTMSR 288
            ++V IKRD+ T  NLGYGFV+  +H++A  AK+A+ GV + GR++R GWAQ+NT+L+VG L+     +E     FAR+G L  + T  K    FG VKY+ R +AE AK ELNG+       P + + W                                                              V  H VHV+F+ G +      S ++E  ++K F+++  V  + +P  R N       Q  + + FVHF  +  GE +A  AI +L+GT I  L + C   R
Sbjct:  135 VNVDIKRDKVTHNNLGYGFVQFETHEEAVKAKKALHGVVVSGRKIRTGWAQRNTTLFVGDLDSFVDESEYRAA-FARYGSLVLDETYFKVDKGFGMVKYKTRENAETAKMELNGKKIGKSKRP-VRVIWGDT----------------------------------------------------------SVQKHCVHVKFDVGKEVKTIQDSDISEDDLQKVFSEYGQVQSVNLP--RHND------QSLKGYGFVHFEDSEKGEESAKKAIANLSGTKIGRLVIQCNYGR 358          
BLAST of mRNA_Ecto-sp13_S_contig13095.2529.1 vs. uniprot
Match: A0A836CDW8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDW8_9STRA)

HSP 1 Score: 118 bits (295), Expect = 5.360e-25
Identity = 66/131 (50.38%), Postives = 88/131 (67.18%), Query Frame = 0
Query:    1 MSVSIKRDRATGKNLGYGFVKLSSHQQARAAKEAMQGVELGGRRVRVGWAQKNTSLYVGGLEGGAITTEMLVREFARFGPLDKELTTIKP-GAKFGFVKYRYRLHAEAAKKELNGRPAFDGLCPGLEIEWN 130
            ++V+IKRDR+T KNLGYGFV++ SH +A  AKE M   E+ GRR+RVGWAQKN +L V GL  G +T E +   F  FG L++E T +   G+    VKYR RLHAE A+++LNG  A  G  P L ++W+
Sbjct:   42 LTVNIKRDRSTSKNLGYGFVRMGSHAEACVAKERMHRAEVHGRRIRVGWAQKNAALAVSGLPDG-VTAEQVKALFRPFGALEEENTQLMTDGSGTAVVKYRNRLHAEDARRQLNGSQAL-GPAP-LRVDWS 169          
BLAST of mRNA_Ecto-sp13_S_contig13095.2529.1 vs. uniprot
Match: A0A7S3DFR0_9EUKA (Hypothetical protein n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3DFR0_9EUKA)

HSP 1 Score: 114 bits (284), Expect = 5.990e-24
Identity = 58/134 (43.28%), Postives = 88/134 (65.67%), Query Frame = 0
Query:    1 MSVSIKRDRATGKNLGYGFVKLSSHQQARAAKEAMQGVELGGRRVRVGWAQKNTSLYVGGLEGGAITTEMLVREFARFGPLDKELTTIKPGAKFGFVKYRYRLHAEAAKKELNGRPAFDGLCPGLEIEWNSVES 134
            +++ IKRDR T  +LGYGFV+    + A  AK+ + G  +G R +R+GWAQKNT+L++G L+  ++T+E+L  EF +FGPL +E T +K G  +GFV++R R  AE AK+E+ G+  F G    + I W   +S
Sbjct:   53 INIDIKRDRMTSNSLGYGFVEFQRFEDALEAKKQLSGARIGERAIRLGWAQKNTNLFIGDLDA-SVTSEILFNEFKQFGPLFEEDTFVKEGMSYGFVRFRKREDAETAKREMQGKN-FHGRV--IRIGWGDAKS 182          
BLAST of mRNA_Ecto-sp13_S_contig13095.2529.1 vs. uniprot
Match: L8H825_ACACA (RNA recognition motif domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H825_ACACA)

HSP 1 Score: 112 bits (280), Expect = 1.330e-23
Identity = 58/115 (50.43%), Postives = 82/115 (71.30%), Query Frame = 0
Query:    1 MSVSIKRDRATGKNLGYGFVKLSSHQQARAAKEAMQGVELGGRRVRVGWAQKNTSLYVGGLEGGAITTEMLVREFARFGPLDKELTTIKPGAKFGFVKYRYRLHAEAAKKELNGR 115
            +SV IKRDR T  +LGYGFV L S + A AAK+AM    +GGR +R+GWAQKNT+L++G L+  +IT+  L   F +FGP+ +E T +K    +GFV++R+R HAE AK+E+N +
Sbjct:   89 ISVEIKRDRVTNYSLGYGFVLLKSREDAGAAKKAMHRQVVGGRAIRIGWAQKNTNLFIGDLDP-SITSAQLREVFRQFGPIYEEETFVK-NRNYGFVRFRHRKHAEMAKREMNNK 201          
BLAST of mRNA_Ecto-sp13_S_contig13095.2529.1 vs. uniprot
Match: A0A7S0TF52_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Elphidium margaritaceum TaxID=933848 RepID=A0A7S0TF52_9EUKA)

HSP 1 Score: 109 bits (272), Expect = 3.010e-23
Identity = 85/299 (28.43%), Postives = 127/299 (42.47%), Query Frame = 0
Query:    1 MSVSIKRDRATGKNLGYGFVKLSSHQQARAAKEAMQGVELGGRRVRVGWAQKNTSLYV---GGLEGGAITTEMLVREFARFGPLDKELTTIKPGAKFGFVKYRYRLHAEAAKKELNGRP-----AFDGLCPGLEIEWNSVESSAQASETAGSEKSTAEXXXXXXXXXXXKEGGTGGRTRGSSQHVGGVGGAHSRHPRGEVSGHTVHVQFEGDQGHVSAVNEVMIRKCFTKWEPVVDIVIPA---SRFNGVSPGPRQLPRCWAFVHFPPTPDGERAAANAIKDLNGTTISELRVHCTMSR 288
            + V IKRD+ T  NLGYGFVK  +   A  AK  + G+E+ GR +R+GWAQKNT+L+V   G +E   IT E L   F+ FGP+ +E T +K   K+GFVK+++RLHAE AK  L+G+       +  + P + I W    +                                                              VHVQFE +      + E   ++ F ++  V  + +P     R  G           + F+HF    +GE +AA AI +L  + I  + + C   +
Sbjct:   31 VEVDIKRDKVTKNNLGYGFVKFRNRCHAEQAKRKLNGLEIAGRAIRIGWAQKNTNLFVCLVGDVERH-ITGEHLREIFSEFGPIYEEDTFVKRN-KYGFVKFKHRLHAEKAKAALDGKHLLTKNGYKTMKP-VRIGWGDANTQRNC----------------------------------------------------------VHVQFEQNSASSVDLKEEDFKQQFQRFGVVNKVSLPRYSDKRLKG-----------YGFIHFEENDEGEESAARAITELTASPIKGVVIMCNFGK 257          
BLAST of mRNA_Ecto-sp13_S_contig13095.2529.1 vs. uniprot
Match: X6NQC1_RETFI (Uncharacterized protein (Fragment) n=1 Tax=Reticulomyxa filosa TaxID=46433 RepID=X6NQC1_RETFI)

HSP 1 Score: 107 bits (266), Expect = 8.990e-22
Identity = 91/319 (28.53%), Postives = 136/319 (42.63%), Query Frame = 0
Query:    2 SVSIKRDRATGKNLGYGFVKLSSHQQARAAKEAMQGVELGGRRVRVGWAQKNTSLYV------------GGLEG--------------GAITTEMLVREFARFGPLDKELTTIKPGAKFGFVKYRYRLHAEAAKKELNGR----PAFDGLCPG-LEIEWNSVESSAQASETAGSEKSTAEXXXXXXXXXXXKEGGTGGRTRGSSQHVGGVGGAHSRHPRGEVSGHTVHVQFEGDQ-GHVSAVNEVMIRKCFTKWEPVVDIVIPASRFNGVSPGPRQLPRCWAFVHFPPTPDGERAAANAIKDLNGTTISELRVHCTMSR 288
            +V IKRD+ T  NLGYGFV   S ++A  AK  M G+E+GGR +R+GWAQKNT+L+V            GG+EG                I  E L   F +FGP+  + T +K    +GFVK+++R HAE AK  L+G+    P  D      + I W    +                                                 H +     V+ HT + + +  + G    + E   R+ F ++  VV + +P  RF+      R+L + + F+HF    DGE AAA AI  L+   I+ + + C   +
Sbjct:   15 NVDIKRDKVTKNNLGYGFVTFKSREEAEKAKRNMHGMEIGGRTIRIGWAQKNTNLFVKAFLFVCLFAKGGGVEGCKLYLLRTVVGDLDSRIDAEHLKTIFKQFGPIYNDDTFVKNNG-YGFVKFKHRTHAEKAKATLDGKFLTIPGTDQQTQRPIRIGWGDANTQRNC--------------------------------------------VHVQFDSTHVTHHTGNSKKKKKKRGTQMDLKESDFREVFQRFGRVVKVSLP--RFSD-----RKL-KGYGFIHFEENDDGEEAAARAITTLSYGAINNVVMQCNFGK 280          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13095.2529.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FNP3_ECTSI8.670e-17389.54Poly(A) binding protein, cytoplasmic 4-like n=1 Ta... [more]
A0A6H5L4J2_9PHAE4.500e-17288.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S0DL40_9EUKA2.930e-2930.48Hypothetical protein n=1 Tax=Amorphochlora amoebif... [more]
W7TSQ6_9STRA1.130e-2831.62Tia1 cytotoxic granule-associated rna binding prot... [more]
A0A7S3Z8S4_9EUKA4.410e-2630.48Hypothetical protein n=1 Tax=Lotharella globosa Ta... [more]
A0A836CDW8_9STRA5.360e-2550.38Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S3DFR0_9EUKA5.990e-2443.28Hypothetical protein n=1 Tax=Palpitomonas bilix Ta... [more]
L8H825_ACACA1.330e-2350.43RNA recognition motif domain containing protein n=... [more]
A0A7S0TF52_9EUKA3.010e-2328.43Hypothetical protein (Fragment) n=1 Tax=Elphidium ... [more]
X6NQC1_RETFI8.990e-2228.53Uncharacterized protein (Fragment) n=1 Tax=Reticul... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 1..48
e-value: 4.7
score: 0.6
coord: 55..128
e-value: 0.0086
score: 25.0
coord: 196..285
e-value: 0.74
score: 7.7
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 56..115
e-value: 4.4E-6
score: 26.4
coord: 2..46
e-value: 5.1E-8
score: 32.6
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 54..134
score: 9.405
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 1..52
score: 11.162
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 191..319
e-value: 1.4E-10
score: 43.4
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 1..53
e-value: 1.0E-13
score: 53.5
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 54..142
e-value: 1.5E-9
score: 39.7
NoneNo IPR availablePANTHERPTHR23147SERINE/ARGININE RICH SPLICING FACTORcoord: 56..169
NoneNo IPR availablePANTHERPTHR23147:SF22SERINE AND ARGININE RICH SPLICING FACTOR 3coord: 216..320
NoneNo IPR availablePANTHERPTHR23147SERINE/ARGININE RICH SPLICING FACTORcoord: 216..320
NoneNo IPR availablePANTHERPTHR23147:SF22SERINE AND ARGININE RICH SPLICING FACTOR 3coord: 56..169
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 211..320
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 2..116

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13095contigEcto-sp13_S_contig13095:642..4508 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13095.2529.1mRNA_Ecto-sp13_S_contig13095.2529.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13095 636..4745 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13095.2529.1 ID=prot_Ecto-sp13_S_contig13095.2529.1|Name=mRNA_Ecto-sp13_S_contig13095.2529.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=437bp
MSVSIKRDRATGKNLGYGFVKLSSHQQARAAKEAMQGVELGGRRVRVGWA
QKNTSLYVGGLEGGAITTEMLVREFARFGPLDKELTTIKPGAKFGFVKYR
YRLHAEAAKKELNGRPAFDGLCPGLEIEWNSVESSAQASETAGSEKSTAE
ERTTGGGGGGGKEGGTGGRTRGSSQHVGGVGGAHSRHPRGEVSGHTVHVQ
FEGDQGHVSAVNEVMIRKCFTKWEPVVDIVIPASRFNGVSPGPRQLPRCW
AFVHFPPTPDGERAAANAIKDLNGTTISELRVHCTMSRGGGTRTGSPWRK
QGGGGGGGNRSRRHSTGGGGAMSHAGGGQGFGGRPSRSSLDGPGAPQGRS
GGWGGHVRAYFCIPHPACVCSSQLLFFSVVSCCVQTQPESVCVHRPVFCD
CFLLHECLVLLPVSPVMSRGVDEGEAEHVVTWCFSW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR012677Nucleotide-bd_a/b_plait_sf
IPR035979RBD_domain_sf