prot_Ecto-sp13_S_contig13095.2529.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m
|
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig13095.2529.1 vs. uniprot
Match: D7FNP3_ECTSI (Poly(A) binding protein, cytoplasmic 4-like n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNP3_ECTSI) HSP 1 Score: 508 bits (1307), Expect = 8.670e-173 Identity = 274/306 (89.54%), Postives = 276/306 (90.20%), Query Frame = 0
Query: 1 MSVSIKRDRATGKNLGYGFVKLSSHQQARAAKEAMQGVELGGRRVRVGWAQKNTSLYVGGLEGGAITTEMLVREFARFGPLDKELTTIKPGAKFGFVKYRYRLHAEAAKKELNGRPAFDGLCPGLEIEWNSVESSAQASETAGSEKSTAEXXXXXXXXXXX----KEGGTGGRTRGSSQHVGGVGGAHSRHPRGEVSGHTVHVQFEGDQGHVSAVNEVMIRKCFTKWEPVVDIVIPASRFNGVSPGPRQLPRCWAFVHFPPTPDGERAAANAIKDLNGTTISELRVHCTMSRGGGTRTGSPWRKQG 302
MSVSIKRDRATGKNLGYGFVKLSSHQ+ARAAKEAMQGVELGGRRVRVGWAQKNTSLYVGGLEGGAITTEMLVREFARFGPLDKELTTIKPGAKFGFVKYRYRLHAEAAKKELN RPAFDGLCP LEIEWNSVESSAQASETAGSEKSTA XXXXXXXXXXX KE AHSRHPRGEVS HTVHVQFEGDQGHVSAVNEVMIRKCFTKWEPVVDIVIPASRFNGVSPGPRQLPRCWAFVHFPPTPDGERAAA+AIK LNGTTISELRVHCTMSRGG TR GSPWRKQG
Sbjct: 232 MSVSIKRDRATGKNLGYGFVKLSSHQEARAAKEAMQGVELGGRRVRVGWAQKNTSLYVGGLEGGAITTEMLVREFARFGPLDKELTTIKPGAKFGFVKYRYRLHAEAAKKELNERPAFDGLCPSLEIEWNSVESSAQASETAGSEKSTAXXXXXXXXXXXXXXXXKEXXXXXXXXXXXXXXXXXXXAHSRHPRGEVSSHTVHVQFEGDQGHVSAVNEVMIRKCFTKWEPVVDIVIPASRFNGVSPGPRQLPRCWAFVHFPPTPDGERAAADAIKGLNGTTISELRVHCTMSRGGSTRAGSPWRKQG 537
BLAST of mRNA_Ecto-sp13_S_contig13095.2529.1 vs. uniprot
Match: A0A6H5L4J2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4J2_9PHAE) HSP 1 Score: 510 bits (1313), Expect = 4.500e-172 Identity = 272/306 (88.89%), Postives = 273/306 (89.22%), Query Frame = 0
Query: 1 MSVSIKRDRATGKNLGYGFVKLSSHQQARAAKEAMQGVELGGRRVRVGWAQKNTSLYVGGLEGGAITTEMLVREFARFGPLDKELTTIKPGAKFGFVKYRYRLHAEAAKKELNGRPAFDGLCPGLEIEWNSVESSAQASETAGSEKSTAEXXXXXXXXXXX----KEGGTGGRTRGSSQHVGGVGGAHSRHPRGEVSGHTVHVQFEGDQGHVSAVNEVMIRKCFTKWEPVVDIVIPASRFNGVSPGPRQLPRCWAFVHFPPTPDGERAAANAIKDLNGTTISELRVHCTMSRGGGTRTGSPWRKQG 302
MSVSIKRDRATGKNLGYGFVKLSSHQ+ARAAKEAMQGVELGGRRVRVGWAQKNTSLYVGGLEGGAITTEMLVREFARFGPLDKELTTIKPGAKFGFVKYRYRLHAEAAKKELN RPAFDGLCP LEIEWNSVESSAQASETAGSEKSTAE XXXXXXXX K AHSRHPRGEVS HTVHVQFEGDQGHVSAVNEVMIRKCFTKWEPVVDIVIPASRFNGVSPGPRQLPRCWAFVHFPPTPDGERAAANAIKDLNGTTISELRVHCTMSRGGGT GSPW KQG
Sbjct: 95 MSVSIKRDRATGKNLGYGFVKLSSHQEARAAKEAMQGVELGGRRVRVGWAQKNTSLYVGGLEGGAITTEMLVREFARFGPLDKELTTIKPGAKFGFVKYRYRLHAEAAKKELNERPAFDGLCPSLEIEWNSVESSAQASETAGSEKSTAEDRTXXXXXXXXXXXXKXXXXXXXXXXXXXXXXXXXXAHSRHPRGEVSSHTVHVQFEGDQGHVSAVNEVMIRKCFTKWEPVVDIVIPASRFNGVSPGPRQLPRCWAFVHFPPTPDGERAAANAIKDLNGTTISELRVHCTMSRGGGTSAGSPWSKQG 400
BLAST of mRNA_Ecto-sp13_S_contig13095.2529.1 vs. uniprot
Match: A0A7S0DL40_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DL40_9EUKA) HSP 1 Score: 129 bits (323), Expect = 2.930e-29 Identity = 89/292 (30.48%), Postives = 132/292 (45.21%), Query Frame = 0
Query: 1 MSVSIKRDRATGKNLGYGFVKLSSHQQARAAKEAMQGVELGGRRVRVGWAQKNTSLYVGGLEGGAITTEMLVREFARFGPLDKELTTIKPGAKFGFVKYRYRLHAEAAKKELNGRPAFDGLCPGLEIEWNSVESSAQASETAGSEKSTAEXXXXXXXXXXXKEGGTGGRTRGSSQHVGGVGGAHSRHPRGEVSGHTVHVQFEGDQG----HVSAVNEVMIRKCFTKWEPVVDIVIPASRFNGVSPGPRQLPRCWAFVHFPPTPDGERAAANAIKDLNGTTISELRVHCTMSR 288
++V IKRDR T NLGYGFV+ +H+QA AK+A+ GVE+ GR++R GWAQ+NT+L+VG L+ I + F+R+G L + T K FG VK++ R +AE AK ELNG+ P + + W V H VHV+F+ + S ++E +++K F ++ V+ + +P N + + + FVHF T GE +A AI +L+GT I L V C R
Sbjct: 102 VNVDIKRDRVTNNNLGYGFVQFETHEQALKAKKALHGVEVSGRKIRTGWAQRNTTLFVGDLDN-TIDATVYRTAFSRYGNLVDDETYFKVDKGFGMVKFKTRENAETAKVELNGKRIGQSKRP-VRVIWGDT----------------------------------------------------------SVQKHCVHVKFDVGKEVKSIQESEISEDVLQKVFQEYGQVLTVNLPRHSDNTL--------KGYGFVHFEDTEKGEESAKKAIANLSGTKIGRLVVQCNYGR 325
BLAST of mRNA_Ecto-sp13_S_contig13095.2529.1 vs. uniprot
Match: W7TSQ6_9STRA (Tia1 cytotoxic granule-associated rna binding protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TSQ6_9STRA) HSP 1 Score: 129 bits (324), Expect = 1.130e-28 Identity = 92/291 (31.62%), Postives = 142/291 (48.80%), Query Frame = 0
Query: 3 VSIKRDRATGKNLGYGFVKLSSHQQARAAKEAMQGVELGGRRVRVGWAQKNTSLYVGGLEGGAITTEMLVREFARFGPLDKELTTIKPG--AKFGFVKYRYRLHAEAAKKELNGRPAFDGLCPGLEIEWNSVESSAQASETAGSEKSTAEXXXXXXXXXXXKEGGTGGRTRGSSQHVGGVGGAHSRHPRGEVSGHTVHVQFEGDQGHVSAVNEVMIRKCFTKWEPVVDIVIPASRFNGVSPGPRQLPRC---WAFVHFPPTPDGERAAANAIKDLNGTTISELRVHCTMSR 288
V IKRD+ T +NLGYGFV++SSH+QA AKE MQG ++ GRR+R+GWAQ+NT+L++G L+ E L R F FG L + ++ G K+G VK+ R AE A++E++GR DG P + + W+ ++ + + + S + G S P ++VHV FE D G + V E +I F + ++ +++P S + C + FVHF + G A AI+ L G ++ +R+ C SR
Sbjct: 134 VDIKRDKVTMRNLGYGFVQMSSHEQAAVAKERMQGADIQGRRIRIGWAQRNTTLFIGDLDEST-NVEDLHRTFGPFGLLYTNDSYLRQGKCGKYGSVKFMSRKDAETARREMHGRVLRDGTRP-IRVVWHHPQTITKKTGLSVPLPSNEQHSRELVHIPPPPPAGV----------------LVSSRP------YSVHVHFEAD-GMENLVTENLIYGLFAPFGQIIAVILPQGPGILCSDQNEDVSCCRRGYGFVHFTGSALGRLCAIEAIRTLQGEIVAGIRLQCAFSR 399
BLAST of mRNA_Ecto-sp13_S_contig13095.2529.1 vs. uniprot
Match: A0A7S3Z8S4_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3Z8S4_9EUKA) HSP 1 Score: 120 bits (301), Expect = 4.410e-26 Identity = 89/292 (30.48%), Postives = 132/292 (45.21%), Query Frame = 0
Query: 1 MSVSIKRDRATGKNLGYGFVKLSSHQQARAAKEAMQGVELGGRRVRVGWAQKNTSLYVGGLEGGAITTEMLVREFARFGPLDKELTTIKPGAKFGFVKYRYRLHAEAAKKELNGRPAFDGLCPGLEIEWNSVESSAQASETAGSEKSTAEXXXXXXXXXXXKEGGTGGRTRGSSQHVGGVGGAHSRHPRGEVSGHTVHVQFE-GDQGHV---SAVNEVMIRKCFTKWEPVVDIVIPASRFNGVSPGPRQLPRCWAFVHFPPTPDGERAAANAIKDLNGTTISELRVHCTMSR 288
++V IKRD+ T NLGYGFV+ +H++A AK+A+ GV + GR++R GWAQ+NT+L+VG L+ +E FAR+G L + T K FG VKY+ R +AE AK ELNG+ P + + W V H VHV+F+ G + S ++E ++K F+++ V + +P R N Q + + FVHF + GE +A AI +L+GT I L + C R
Sbjct: 135 VNVDIKRDKVTHNNLGYGFVQFETHEEAVKAKKALHGVVVSGRKIRTGWAQRNTTLFVGDLDSFVDESEYRAA-FARYGSLVLDETYFKVDKGFGMVKYKTRENAETAKMELNGKKIGKSKRP-VRVIWGDT----------------------------------------------------------SVQKHCVHVKFDVGKEVKTIQDSDISEDDLQKVFSEYGQVQSVNLP--RHND------QSLKGYGFVHFEDSEKGEESAKKAIANLSGTKIGRLVIQCNYGR 358
BLAST of mRNA_Ecto-sp13_S_contig13095.2529.1 vs. uniprot
Match: A0A836CDW8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDW8_9STRA) HSP 1 Score: 118 bits (295), Expect = 5.360e-25 Identity = 66/131 (50.38%), Postives = 88/131 (67.18%), Query Frame = 0
Query: 1 MSVSIKRDRATGKNLGYGFVKLSSHQQARAAKEAMQGVELGGRRVRVGWAQKNTSLYVGGLEGGAITTEMLVREFARFGPLDKELTTIKP-GAKFGFVKYRYRLHAEAAKKELNGRPAFDGLCPGLEIEWN 130
++V+IKRDR+T KNLGYGFV++ SH +A AKE M E+ GRR+RVGWAQKN +L V GL G +T E + F FG L++E T + G+ VKYR RLHAE A+++LNG A G P L ++W+
Sbjct: 42 LTVNIKRDRSTSKNLGYGFVRMGSHAEACVAKERMHRAEVHGRRIRVGWAQKNAALAVSGLPDG-VTAEQVKALFRPFGALEEENTQLMTDGSGTAVVKYRNRLHAEDARRQLNGSQAL-GPAP-LRVDWS 169
BLAST of mRNA_Ecto-sp13_S_contig13095.2529.1 vs. uniprot
Match: A0A7S3DFR0_9EUKA (Hypothetical protein n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3DFR0_9EUKA) HSP 1 Score: 114 bits (284), Expect = 5.990e-24 Identity = 58/134 (43.28%), Postives = 88/134 (65.67%), Query Frame = 0
Query: 1 MSVSIKRDRATGKNLGYGFVKLSSHQQARAAKEAMQGVELGGRRVRVGWAQKNTSLYVGGLEGGAITTEMLVREFARFGPLDKELTTIKPGAKFGFVKYRYRLHAEAAKKELNGRPAFDGLCPGLEIEWNSVES 134
+++ IKRDR T +LGYGFV+ + A AK+ + G +G R +R+GWAQKNT+L++G L+ ++T+E+L EF +FGPL +E T +K G +GFV++R R AE AK+E+ G+ F G + I W +S
Sbjct: 53 INIDIKRDRMTSNSLGYGFVEFQRFEDALEAKKQLSGARIGERAIRLGWAQKNTNLFIGDLDA-SVTSEILFNEFKQFGPLFEEDTFVKEGMSYGFVRFRKREDAETAKREMQGKN-FHGRV--IRIGWGDAKS 182
BLAST of mRNA_Ecto-sp13_S_contig13095.2529.1 vs. uniprot
Match: L8H825_ACACA (RNA recognition motif domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H825_ACACA) HSP 1 Score: 112 bits (280), Expect = 1.330e-23 Identity = 58/115 (50.43%), Postives = 82/115 (71.30%), Query Frame = 0
Query: 1 MSVSIKRDRATGKNLGYGFVKLSSHQQARAAKEAMQGVELGGRRVRVGWAQKNTSLYVGGLEGGAITTEMLVREFARFGPLDKELTTIKPGAKFGFVKYRYRLHAEAAKKELNGR 115
+SV IKRDR T +LGYGFV L S + A AAK+AM +GGR +R+GWAQKNT+L++G L+ +IT+ L F +FGP+ +E T +K +GFV++R+R HAE AK+E+N +
Sbjct: 89 ISVEIKRDRVTNYSLGYGFVLLKSREDAGAAKKAMHRQVVGGRAIRIGWAQKNTNLFIGDLDP-SITSAQLREVFRQFGPIYEEETFVK-NRNYGFVRFRHRKHAEMAKREMNNK 201
BLAST of mRNA_Ecto-sp13_S_contig13095.2529.1 vs. uniprot
Match: A0A7S0TF52_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Elphidium margaritaceum TaxID=933848 RepID=A0A7S0TF52_9EUKA) HSP 1 Score: 109 bits (272), Expect = 3.010e-23 Identity = 85/299 (28.43%), Postives = 127/299 (42.47%), Query Frame = 0
Query: 1 MSVSIKRDRATGKNLGYGFVKLSSHQQARAAKEAMQGVELGGRRVRVGWAQKNTSLYV---GGLEGGAITTEMLVREFARFGPLDKELTTIKPGAKFGFVKYRYRLHAEAAKKELNGRP-----AFDGLCPGLEIEWNSVESSAQASETAGSEKSTAEXXXXXXXXXXXKEGGTGGRTRGSSQHVGGVGGAHSRHPRGEVSGHTVHVQFEGDQGHVSAVNEVMIRKCFTKWEPVVDIVIPA---SRFNGVSPGPRQLPRCWAFVHFPPTPDGERAAANAIKDLNGTTISELRVHCTMSR 288
+ V IKRD+ T NLGYGFVK + A AK + G+E+ GR +R+GWAQKNT+L+V G +E IT E L F+ FGP+ +E T +K K+GFVK+++RLHAE AK L+G+ + + P + I W + VHVQFE + + E ++ F ++ V + +P R G + F+HF +GE +AA AI +L + I + + C +
Sbjct: 31 VEVDIKRDKVTKNNLGYGFVKFRNRCHAEQAKRKLNGLEIAGRAIRIGWAQKNTNLFVCLVGDVERH-ITGEHLREIFSEFGPIYEEDTFVKRN-KYGFVKFKHRLHAEKAKAALDGKHLLTKNGYKTMKP-VRIGWGDANTQRNC----------------------------------------------------------VHVQFEQNSASSVDLKEEDFKQQFQRFGVVNKVSLPRYSDKRLKG-----------YGFIHFEENDEGEESAARAITELTASPIKGVVIMCNFGK 257
BLAST of mRNA_Ecto-sp13_S_contig13095.2529.1 vs. uniprot
Match: X6NQC1_RETFI (Uncharacterized protein (Fragment) n=1 Tax=Reticulomyxa filosa TaxID=46433 RepID=X6NQC1_RETFI) HSP 1 Score: 107 bits (266), Expect = 8.990e-22 Identity = 91/319 (28.53%), Postives = 136/319 (42.63%), Query Frame = 0
Query: 2 SVSIKRDRATGKNLGYGFVKLSSHQQARAAKEAMQGVELGGRRVRVGWAQKNTSLYV------------GGLEG--------------GAITTEMLVREFARFGPLDKELTTIKPGAKFGFVKYRYRLHAEAAKKELNGR----PAFDGLCPG-LEIEWNSVESSAQASETAGSEKSTAEXXXXXXXXXXXKEGGTGGRTRGSSQHVGGVGGAHSRHPRGEVSGHTVHVQFEGDQ-GHVSAVNEVMIRKCFTKWEPVVDIVIPASRFNGVSPGPRQLPRCWAFVHFPPTPDGERAAANAIKDLNGTTISELRVHCTMSR 288
+V IKRD+ T NLGYGFV S ++A AK M G+E+GGR +R+GWAQKNT+L+V GG+EG I E L F +FGP+ + T +K +GFVK+++R HAE AK L+G+ P D + I W + H + V+ HT + + + + G + E R+ F ++ VV + +P RF+ R+L + + F+HF DGE AAA AI L+ I+ + + C +
Sbjct: 15 NVDIKRDKVTKNNLGYGFVTFKSREEAEKAKRNMHGMEIGGRTIRIGWAQKNTNLFVKAFLFVCLFAKGGGVEGCKLYLLRTVVGDLDSRIDAEHLKTIFKQFGPIYNDDTFVKNNG-YGFVKFKHRTHAEKAKATLDGKFLTIPGTDQQTQRPIRIGWGDANTQRNC--------------------------------------------VHVQFDSTHVTHHTGNSKKKKKKRGTQMDLKESDFREVFQRFGRVVKVSLP--RFSD-----RKL-KGYGFIHFEENDDGEEAAARAITTLSYGAINNVVMQCNFGK 280 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13095.2529.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_Ecto-sp13_S_contig13095.2529.1 ID=prot_Ecto-sp13_S_contig13095.2529.1|Name=mRNA_Ecto-sp13_S_contig13095.2529.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=437bpback to top |