prot_Ecto-sp13_S_contig13092.2527.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13092.2527.1
Unique Nameprot_Ecto-sp13_S_contig13092.2527.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length162
Homology
BLAST of mRNA_Ecto-sp13_S_contig13092.2527.1 vs. uniprot
Match: D8LSE6_ECTSI (NUOE homolog, NADH dehydrogenase (Ubiquinone) subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSE6_ECTSI)

HSP 1 Score: 299 bits (766), Expect = 1.130e-100
Identity = 149/162 (91.98%), Postives = 151/162 (93.21%), Query Frame = 0
Query:    1 HTTQQHKDTPDNNETTFFDFTDENYARVEKIMAKYPANYRQASIIPLLDLAQRQARGRDRTAHGGWLPLAAMEKVAKIVGQHEMKVYEVATFYTMFNREKRGKYFIQLCGTTPCMVCGSEDIKKTIMDELGIKNGGTTADGMFTLLEVECLGACANAPMVQV 162
            H   QHKDTPDNNETTFFDFTDENYARVEKIMAKYPANYRQASIIPLLDLAQRQ        HGGWLPLAAMEKVAKIVGQHEMKVYEVATFYTMFNREKRGK+FIQLCGTTPCMVCGSEDIKKTIMDELGIKNGGTTADGMFTLLEVECLGACANAPMVQ+
Sbjct:   44 HQLGQHKDTPDNNETTFFDFTDENYARVEKIMAKYPANYRQASIIPLLDLAQRQ--------HGGWLPLAAMEKVAKIVGQHEMKVYEVATFYTMFNREKRGKHFIQLCGTTPCMVCGSEDIKKTIMDELGIKNGGTTADGMFTLLEVECLGACANAPMVQI 197          
BLAST of mRNA_Ecto-sp13_S_contig13092.2527.1 vs. uniprot
Match: A0A7S1VGY5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VGY5_9STRA)

HSP 1 Score: 246 bits (629), Expect = 6.120e-80
Identity = 119/156 (76.28%), Postives = 134/156 (85.90%), Query Frame = 0
Query:    6 HKDTPDNNETTFFDFTDENYARVEKIMAKYPANYRQASIIPLLDLAQRQARGRDRTAHGGWLPLAAMEKVAKIVGQHEMKVYEVATFYTMFNREKRGKYFIQLCGTTPCMVCGSEDIKKTIMDELGIKNGGTTADGMFTLLEVECLGACANAPMVQ 161
            H DTPDNNE TFFDFTDENY RV+ I+ KYP NY+Q+++IPLLDLAQRQ        HGGWLPLAA+EKVAK+VG   ++VYEVA+FYTMFNR K GKYF+QLCGTTPCM+CGSEDIK+TI  ELGIKNG TTADGMFTLLEVECLGACANAPM+Q
Sbjct:   63 HIDTPDNNEETFFDFTDENYKRVDMILGKYPDNYKQSAVIPLLDLAQRQ--------HGGWLPLAAVEKVAKVVGIAPIRVYEVASFYTMFNRTKVGKYFLQLCGTTPCMICGSEDIKQTIEQELGIKNGQTTADGMFTLLEVECLGACANAPMIQ 210          
BLAST of mRNA_Ecto-sp13_S_contig13092.2527.1 vs. uniprot
Match: A0A7S2FXN0_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FXN0_9STRA)

HSP 1 Score: 242 bits (618), Expect = 3.810e-78
Identity = 119/161 (73.91%), Postives = 133/161 (82.61%), Query Frame = 0
Query:    1 HTTQQHKDTPDNNETTFFDFTDENYARVEKIMAKYPANYRQASIIPLLDLAQRQARGRDRTAHGGWLPLAAMEKVAKIVGQHEMKVYEVATFYTMFNREKRGKYFIQLCGTTPCMVCGSEDIKKTIMDELGIKNGGTTADGMFTLLEVECLGACANAPMVQ 161
            H T QH+ T +NN  TFFDFT+ENY  VE ++ KYP NY+QA IIPLLDLAQRQ        +GGWLPLAAM+ VAK+V    M+VYEVATFYTMFNREKRGKYFIQLCGTTPCMVCGSEDIK+TIMDELGI +G TT DG+FTLLEVECLGACANAPM+Q
Sbjct:   38 HATSQHQHTDENNSQTFFDFTEENYKLVENVLGKYPGNYKQAGIIPLLDLAQRQ--------NGGWLPLAAMDCVAKVVEVPPMRVYEVATFYTMFNREKRGKYFIQLCGTTPCMVCGSEDIKQTIMDELGIHDGETTDDGLFTLLEVECLGACANAPMIQ 190          
BLAST of mRNA_Ecto-sp13_S_contig13092.2527.1 vs. uniprot
Match: A0A7S2WTS6_9STRA (Hypothetical protein (Fragment) n=2 Tax=Ochrophyta TaxID=2696291 RepID=A0A7S2WTS6_9STRA)

HSP 1 Score: 239 bits (610), Expect = 2.550e-77
Identity = 117/156 (75.00%), Postives = 130/156 (83.33%), Query Frame = 0
Query:    6 HKDTPDNNETTFFDFTDENYARVEKIMAKYPANYRQASIIPLLDLAQRQARGRDRTAHGGWLPLAAMEKVAKIVGQHEMKVYEVATFYTMFNREKRGKYFIQLCGTTPCMVCGSEDIKKTIMDELGIKNGGTTADGMFTLLEVECLGACANAPMVQ 161
            H +TPDN   T+FDFTDENY RV KI++KYPANY+Q+ IIPLLDLAQRQ        HGGWLP+AAM+KVA+IVG    +VYEVA+FYTMFNR K GKYFIQLCGTTPCM+CGSEDIKKTI   LGIKNG TT DGMFTLLEVECLGACANAPM+Q
Sbjct:   31 HINTPDNTPETYFDFTDENYKRVNKILSKYPANYKQSGIIPLLDLAQRQ--------HGGWLPVAAMDKVAEIVGAAPSRVYEVASFYTMFNRTKVGKYFIQLCGTTPCMICGSEDIKKTIEKHLGIKNGETTKDGMFTLLEVECLGACANAPMIQ 178          
BLAST of mRNA_Ecto-sp13_S_contig13092.2527.1 vs. uniprot
Match: A0A835YYT9_9STRA (NADH dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYT9_9STRA)

HSP 1 Score: 239 bits (610), Expect = 4.130e-77
Identity = 116/161 (72.05%), Postives = 133/161 (82.61%), Query Frame = 0
Query:    1 HTTQQHKDTPDNNETTFFDFTDENYARVEKIMAKYPANYRQASIIPLLDLAQRQARGRDRTAHGGWLPLAAMEKVAKIVGQHEMKVYEVATFYTMFNREKRGKYFIQLCGTTPCMVCGSEDIKKTIMDELGIKNGGTTADGMFTLLEVECLGACANAPMVQ 161
            H   +HKD P N   T F+F+DEN+  VEKI+AKYPANYRQA+ IPLLDLAQRQ        +GGWLPLAAM KVA ++G   M++YEVATFYTMFNREKRG+YFIQLCGTTPCMVCGS DIKKTI +ELGIK+G TTADG+FTLLEVECLG+CANAPM+Q
Sbjct:   34 HVLGKHKDAPGNTTDTHFEFSDENFELVEKILAKYPANYRQAAAIPLLDLAQRQ--------NGGWLPLAAMNKVAAVIGVQPMRIYEVATFYTMFNREKRGQYFIQLCGTTPCMVCGSNDIKKTITEELGIKDGETTADGLFTLLEVECLGSCANAPMIQ 186          
BLAST of mRNA_Ecto-sp13_S_contig13092.2527.1 vs. uniprot
Match: A0A7S2MPT9_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MPT9_9STRA)

HSP 1 Score: 238 bits (608), Expect = 6.640e-77
Identity = 117/156 (75.00%), Postives = 130/156 (83.33%), Query Frame = 0
Query:    6 HKDTPDNNETTFFDFTDENYARVEKIMAKYPANYRQASIIPLLDLAQRQARGRDRTAHGGWLPLAAMEKVAKIVGQHEMKVYEVATFYTMFNREKRGKYFIQLCGTTPCMVCGSEDIKKTIMDELGIKNGGTTADGMFTLLEVECLGACANAPMVQ 161
            H DTPDN   T FDFT ENY RV+ I+AK+PANY+QA IIPLLDLAQRQ        HGGWLP+AAM+KVA+IV  +  +VYEVA+FYTMFNR KRGKYF+QLCGTTPCM+CGSEDIKKTI D LGIKNG TT DGMFTLLEVECLGACANAPM+Q
Sbjct:   32 HLDTPDNTVETKFDFTIENYKRVDSILAKFPANYKQAGIIPLLDLAQRQ--------HGGWLPVAAMDKVAQIVDTNPARVYEVASFYTMFNRTKRGKYFLQLCGTTPCMICGSEDIKKTIEDHLGIKNGETTKDGMFTLLEVECLGACANAPMIQ 179          
BLAST of mRNA_Ecto-sp13_S_contig13092.2527.1 vs. uniprot
Match: A0A7S3Y3J8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y3J8_HETAK)

HSP 1 Score: 233 bits (595), Expect = 1.210e-74
Identity = 112/159 (70.44%), Postives = 130/159 (81.76%), Query Frame = 0
Query:    3 TQQHKDTPDNNETTFFDFTDENYARVEKIMAKYPANYRQASIIPLLDLAQRQARGRDRTAHGGWLPLAAMEKVAKIVGQHEMKVYEVATFYTMFNREKRGKYFIQLCGTTPCMVCGSEDIKKTIMDELGIKNGGTTADGMFTLLEVECLGACANAPMVQ 161
            T QH+  PDNN  TFFDFTD NY +V+KI+ KYP N+++ +IIPLLDLAQRQ        HGGWLP+AAM+KVA++VG   M VYEVATFYTMFNREK GKYFIQLCGTTPCMVCG++DIK+ I D LGI +G TTADG+FTL EVECLGACANAPM+Q
Sbjct:   51 TAQHRYAPDNNPETFFDFTDANYKKVDKILGKYPKNFKKGAIIPLLDLAQRQ--------HGGWLPVAAMDKVAQVVGAPPMAVYEVATFYTMFNREKLGKYFIQLCGTTPCMVCGAQDIKRAITDHLGIHDGETTADGLFTLREVECLGACANAPMIQ 201          
BLAST of mRNA_Ecto-sp13_S_contig13092.2527.1 vs. uniprot
Match: A0A7S1DC55_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1DC55_CYCTE)

HSP 1 Score: 232 bits (591), Expect = 3.470e-74
Identity = 115/156 (73.72%), Postives = 129/156 (82.69%), Query Frame = 0
Query:    6 HKDTPDNNETTFFDFTDENYARVEKIMAKYPANYRQASIIPLLDLAQRQARGRDRTAHGGWLPLAAMEKVAKIVGQHEMKVYEVATFYTMFNREKRGKYFIQLCGTTPCMVCGSEDIKKTIMDELGIKNGGTTADGMFTLLEVECLGACANAPMVQ 161
            H DT DN     FDFT+ENYARV+KI++KYPANY+QA IIPLLDLAQRQ        HGGWLP+AAM+KVA+IVG    +VYEVA+FYTMFNR K GK+FIQLCGTTPCM+CGSEDIK+TI   LGIKNG TT DG+FTLLEVECLGACANAPMVQ
Sbjct:   41 HIDTEDNTVAVKFDFTEENYARVDKILSKYPANYKQAGIIPLLDLAQRQ--------HGGWLPVAAMDKVAQIVGAAPSRVYEVASFYTMFNRTKVGKHFIQLCGTTPCMICGSEDIKQTIEKHLGIKNGETTKDGLFTLLEVECLGACANAPMVQ 188          
BLAST of mRNA_Ecto-sp13_S_contig13092.2527.1 vs. uniprot
Match: K0R6F7_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R6F7_THAOC)

HSP 1 Score: 232 bits (591), Expect = 4.600e-74
Identity = 114/156 (73.08%), Postives = 128/156 (82.05%), Query Frame = 0
Query:    6 HKDTPDNNETTFFDFTDENYARVEKIMAKYPANYRQASIIPLLDLAQRQARGRDRTAHGGWLPLAAMEKVAKIVGQHEMKVYEVATFYTMFNREKRGKYFIQLCGTTPCMVCGSEDIKKTIMDELGIKNGGTTADGMFTLLEVECLGACANAPMVQ 161
            H +TPDN   T+FDFT+ENY  V KI++KYPANY+Q+ IIPLLDLAQRQ        HGGWLP+AAM+KVA IV     +VYEVA+FYTMFNR K GKYFIQLCGTTPCM+CGSEDIKKTI + LGIKNG TT DGMFTLLEVECLGACANAPM+Q
Sbjct:   51 HINTPDNTVETYFDFTEENYKLVNKILSKYPANYKQSGIIPLLDLAQRQ--------HGGWLPVAAMDKVASIVEAAPSRVYEVASFYTMFNRTKVGKYFIQLCGTTPCMICGSEDIKKTIENHLGIKNGETTEDGMFTLLEVECLGACANAPMIQ 198          
BLAST of mRNA_Ecto-sp13_S_contig13092.2527.1 vs. uniprot
Match: A0A6S9HNE8_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S9HNE8_9STRA)

HSP 1 Score: 230 bits (587), Expect = 1.020e-73
Identity = 113/156 (72.44%), Postives = 127/156 (81.41%), Query Frame = 0
Query:    6 HKDTPDNNETTFFDFTDENYARVEKIMAKYPANYRQASIIPLLDLAQRQARGRDRTAHGGWLPLAAMEKVAKIVGQHEMKVYEVATFYTMFNREKRGKYFIQLCGTTPCMVCGSEDIKKTIMDELGIKNGGTTADGMFTLLEVECLGACANAPMVQ 161
            H DTPDN   T FDFT ENY RV+ I++KYPANY+QA IIPLLDLAQRQ        HGGWLP+AAM+KVA+IV     +VYEVA+FYTMFNR K GKYF+QLCGTTPCM+CGSEDIK+TI   LGIKNG TT DG+FTLLEVECLGACANAPM+Q
Sbjct:   32 HLDTPDNTVETKFDFTIENYKRVDSILSKYPANYKQAGIIPLLDLAQRQ--------HGGWLPVAAMDKVAQIVETDPARVYEVASFYTMFNRTKTGKYFLQLCGTTPCMICGSEDIKQTIESHLGIKNGETTKDGLFTLLEVECLGACANAPMIQ 179          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13092.2527.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LSE6_ECTSI1.130e-10091.98NUOE homolog, NADH dehydrogenase (Ubiquinone) subu... [more]
A0A7S1VGY5_9STRA6.120e-8076.28Hypothetical protein (Fragment) n=1 Tax=Grammatoph... [more]
A0A7S2FXN0_9STRA3.810e-7873.91Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2WTS6_9STRA2.550e-7775.00Hypothetical protein (Fragment) n=2 Tax=Ochrophyta... [more]
A0A835YYT9_9STRA4.130e-7772.05NADH dehydrogenase n=1 Tax=Tribonema minus TaxID=3... [more]
A0A7S2MPT9_9STRA6.640e-7775.00Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A7S3Y3J8_HETAK1.210e-7470.44Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S1DC55_CYCTE3.470e-7473.72Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
K0R6F7_THAOC4.600e-7473.08Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A6S9HNE8_9STRA1.020e-7372.44Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR041921NADH-quinone oxidoreductase subunit E, N-terminalGENE3D1.10.10.1590coord: 18..99
e-value: 3.0E-22
score: 80.5
NoneNo IPR availableGENE3D3.40.30.10coord: 101..162
e-value: 2.8E-22
score: 80.7
NoneNo IPR availablePFAMPF012572Fe-2S_thioredxcoord: 28..162
e-value: 1.8E-48
score: 164.1
NoneNo IPR availablePANTHERPTHR10371:SF3NADH DEHYDROGENASE [UBIQUINONE] FLAVOPROTEIN 2, MITOCHONDRIALcoord: 5..162
NoneNo IPR availablePANTHERPTHR10371NADH DEHYDROGENASE UBIQUINONE FLAVOPROTEIN 2, MITOCHONDRIALcoord: 5..162
IPR002023NADH-quinone oxidoreductase subunit E-likeTIGRFAMTIGR01958TIGR01958coord: 28..162
e-value: 2.2E-42
score: 142.7
IPR002023NADH-quinone oxidoreductase subunit E-likePIRSFPIRSF000216NDH-1_Ecoord: 3..162
e-value: 9.3E-60
score: 200.1
IPR002023NADH-quinone oxidoreductase subunit E-likePROSITEPS01099COMPLEX1_24Kcoord: 140..158
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 20..162

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13092contigEcto-sp13_S_contig13092:538..1761 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13092.2527.1mRNA_Ecto-sp13_S_contig13092.2527.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13092 538..1761 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13092.2527.1 ID=prot_Ecto-sp13_S_contig13092.2527.1|Name=mRNA_Ecto-sp13_S_contig13092.2527.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=162bp
HTTQQHKDTPDNNETTFFDFTDENYARVEKIMAKYPANYRQASIIPLLDL
AQRQARGRDRTAHGGWLPLAAMEKVAKIVGQHEMKVYEVATFYTMFNREK
RGKYFIQLCGTTPCMVCGSEDIKKTIMDELGIKNGGTTADGMFTLLEVEC
LGACANAPMVQV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR041921NuoE_N
IPR002023NuoE-like
IPR036249Thioredoxin-like_sf