prot_Ecto-sp13_S_contig1309.2524.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1309.2524.1
Unique Nameprot_Ecto-sp13_S_contig1309.2524.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length294
Homology
BLAST of mRNA_Ecto-sp13_S_contig1309.2524.1 vs. uniprot
Match: D7G1S0_ECTSI (HSF_DOMAIN domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1S0_ECTSI)

HSP 1 Score: 424 bits (1089), Expect = 3.310e-147
Identity = 216/243 (88.89%), Postives = 224/243 (92.18%), Query Frame = 0
Query:    1 MHPQFRQGRRDLLVSIKRQKDGGHLKRKQDDLRKSDILNTLVVEVGSMRDDLEMANGKLDDVLSLLSGITGTKQPGELFVQQHQGMRGDDDRVIGRGCSNKSTSVRGRFGRWGAGVGGGGDTDQRCLGAYAHGEQLDGSSAPRFHTDQQRRQEWHGHEAFPHSRWPCPAGQYPEENNEHNQMRHHVGQPQQTLPPLAAVTARSSEVAPAMPSYHLLPPMYRSQSRRDSDNSLGPSEHDRGGED 243
            MHPQFRQGRRDLLVSIKRQKDGGHLKRKQDDLRKSDILNTL VEVGSMR DLEMANGKLDDVLSLLSGITGTKQPGEL VQQHQ MRGDD    GRG S++S+SV G FGRWGAGVGGGGDT QRCLGAYAH EQLDGSSAPRFHTDQQRRQEW GH AFPHSRWPCPA QYPEENNEHNQMRHHVGQ QQTLPPLAAVTAR+SEVA  +PSYHLLPPMYRS+SRRDSDNSLGPSEH++GGED
Sbjct:   61 MHPQFRQGRRDLLVSIKRQKDGGHLKRKQDDLRKSDILNTLAVEVGSMRVDLEMANGKLDDVLSLLSGITGTKQPGELSVQQHQSMRGDD----GRGGSDRSSSVHGGFGRWGAGVGGGGDTGQRCLGAYAHSEQLDGSSAPRFHTDQQRRQEWQGHVAFPHSRWPCPAEQYPEENNEHNQMRHHVGQAQQTLPPLAAVTARASEVALTVPSYHLLPPMYRSRSRRDSDNSLGPSEHEQGGED 299          
BLAST of mRNA_Ecto-sp13_S_contig1309.2524.1 vs. uniprot
Match: D7FV29_ECTSI (Heat Shock transcription factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV29_ECTSI)

HSP 1 Score: 102 bits (255), Expect = 4.930e-21
Identity = 94/264 (35.61%), Postives = 120/264 (45.45%), Query Frame = 0
Query:    2 HPQFRQGRRDLLVSIKRQKDGGHLKRKQDDLRKSDILNTLVVEVGSMRDDLEMANGKLDDVLSLLSGITGTKQPGELF--VQQ-HQGMRGDDDRVIGRGCSNKSTSVRGRFGRWGAG-----------VGGG---GDTDQRCLGAYAHGEQLDGSSAPRFHTDQQRRQEWHGHEAFPHSRWP------CPAGQYPEENNEHNQMRHHVGQPQQTLPPLA-AVTARSSEVAPAMPSYHLLPPMYRSQSRRDSDNSLGPSEHDRGG 241
            HP+FR+GRRDLL  IKRQKDGG +KRKQ +L K   L+TL  +V  M  DL  ANGKLDD++ +LSG+ G      +   VQ+ + G  GD     G G S+   +        GA            VG G   G TDQ       +G  LD    P      Q+ Q W GH  +P    P      C            NQ+R+   Q    LP L  AV A +S V+ A P    LPP+      R   N+L  S H++ G
Sbjct:   93 HPEFRRGRRDLLAGIKRQKDGGRVKRKQAELEKLGTLSTLTTDVDMMSVDLRAANGKLDDIMLMLSGMAGGNLHSSMIPPVQRGNMGRGGDGSFGFGIGGSSSDQNSYNTAETAGAAAAAFGGDRQQVVGAGSRDGSTDQEGHDPSVYGAPLDQRHTPCLPVGHQQ-QGWQGHGPYPQPHQPSFSTERCLVAP--------NQVRYQAAQSHPALPSLPLAVAAHASHVSAAEPRRQQLPPLCYPP--RGDGNNLASSGHEQVG 345          
BLAST of mRNA_Ecto-sp13_S_contig1309.2524.1 vs. uniprot
Match: A0A6H5LDD9_9PHAE (HSF_DOMAIN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LDD9_9PHAE)

HSP 1 Score: 92.0 bits (227), Expect = 2.830e-17
Identity = 46/74 (62.16%), Postives = 56/74 (75.68%), Query Frame = 0
Query:    2 HPQFRQGRRDLLVSIKRQKDGGHLKRKQDDLRKSDILNTLVVEVGSMRDDLEMANGKLDDVLSLLSGITGTKQP 75
            HPQFR+GRRDLLV IKRQKDGG LKRK+ D +KSDIL TL  +V ++ +DL  ANGKLD ++S+L G T    P
Sbjct:   77 HPQFRRGRRDLLVGIKRQKDGGRLKRKRADSQKSDILTTLRADVDTLSEDLREANGKLDTIISMLMGATSGNHP 150          
BLAST of mRNA_Ecto-sp13_S_contig1309.2524.1 vs. uniprot
Match: D7G1S2_ECTSI (Heat Shock transcription factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1S2_ECTSI)

HSP 1 Score: 55.5 bits (132), Expect = 5.710e-6
Identity = 26/30 (86.67%), Postives = 28/30 (93.33%), Query Frame = 0
Query:    2 HPQFRQGRRDLLVSIKRQKDGGHLKRKQDD 31
            HPQFR+GRRDLLV IKRQKDGG LKRK+DD
Sbjct:  108 HPQFRRGRRDLLVGIKRQKDGGRLKRKRDD 137          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1309.2524.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7G1S0_ECTSI3.310e-14788.89HSF_DOMAIN domain-containing protein n=1 Tax=Ectoc... [more]
D7FV29_ECTSI4.930e-2135.61Heat Shock transcription factor n=1 Tax=Ectocarpus... [more]
A0A6H5LDD9_9PHAE2.830e-1762.16HSF_DOMAIN domain-containing protein n=1 Tax=Ectoc... [more]
D7G1S2_ECTSI5.710e-686.67Heat Shock transcription factor n=1 Tax=Ectocarpus... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1309contigEcto-sp13_S_contig1309:4565..9384 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1309.2524.1mRNA_Ecto-sp13_S_contig1309.2524.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1309 3875..10893 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1309.2524.1 ID=prot_Ecto-sp13_S_contig1309.2524.1|Name=mRNA_Ecto-sp13_S_contig1309.2524.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=294bp
MHPQFRQGRRDLLVSIKRQKDGGHLKRKQDDLRKSDILNTLVVEVGSMRD
DLEMANGKLDDVLSLLSGITGTKQPGELFVQQHQGMRGDDDRVIGRGCSN
KSTSVRGRFGRWGAGVGGGGDTDQRCLGAYAHGEQLDGSSAPRFHTDQQR
RQEWHGHEAFPHSRWPCPAGQYPEENNEHNQMRHHVGQPQQTLPPLAAVT
ARSSEVAPAMPSYHLLPPMYRSQSRRDSDNSLGPSEHDRGGEDSDIVVWE
GCWKGGVGSSFDAITHTRSEGILVSPTNKGALREVLATAPLDS*
back to top