mRNA_Ecto-sp13_S_contig13082.2521.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig13082.2521.1 vs. uniprot
Match: D8LP21_ECTSI (Methyl transferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP21_ECTSI) HSP 1 Score: 395 bits (1014), Expect = 1.480e-134 Identity = 203/216 (93.98%), Postives = 207/216 (95.83%), Query Frame = 1
Query: 187 MPPVAELVRQFMSELDAVEGDVLDLACGSGQNGLFVAQSDQDKGRRNRKVVLLDRNIGEAVRRTAELPEATRELVVHQETDLETEENPSPLPEEAFGAVLVFNYLHRPLVANLRDSVKPGGLVLYKTFTWQHPSVGVRPSNPAFLLGPGELKDEMFAGWEVIDFFEGVVVVEGTASADGGGVRRAAVSSIVCRKPVPAVV--DKSVPTETSTPVEL 828
MPPVAELVRQFMSELDAVEGDVLDLACGSGQNGLFVAQSDQDKGRR+RKVVLLDRNIGEAVR TA+LPEATRELVVHQETDLETEENPSPLP E FGAVLVFNYLHRPLVANLRDSVKPGGLVLYKTFTWQHPSVGVRPSNPAFLLGPGELKDEMFAGWEVIDFFEGVVVVEG ASA+G GVRR AVSSIVCRKPVPAVV D+SVPTETS PVEL
Sbjct: 1 MPPVAELVRQFMSELDAVEGDVLDLACGSGQNGLFVAQSDQDKGRRDRKVVLLDRNIGEAVRCTADLPEATRELVVHQETDLETEENPSPLPRETFGAVLVFNYLHRPLVANLRDSVKPGGLVLYKTFTWQHPSVGVRPSNPAFLLGPGELKDEMFAGWEVIDFFEGVVVVEGNASAEGSGVRRVAVSSIVCRKPVPAVVVVDRSVPTETSAPVEL 216
BLAST of mRNA_Ecto-sp13_S_contig13082.2521.1 vs. uniprot
Match: A0A6H5JPT9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPT9_9PHAE) HSP 1 Score: 374 bits (961), Expect = 2.850e-126 Identity = 198/232 (85.34%), Postives = 201/232 (86.64%), Query Frame = 1
Query: 220 MSELDAVEGDVLDLACGSGQNGLFVAQSDQDKGRRNRKVVLLDRNIGEAVRRTAELPEATRELVVHQE-----------------------------TDLETEENPSPLPEEAFGAVLVFNYLHRPLVANLRDSVKPGGLVLYKTFTWQHPSVGVRPSNPAFLLGPGELKDEMFAGWEVIDFFEGVVVVEGTASADGGGVRRAAVSSIVCRKPVPAVVDKSVPTETSTPVEL 828
MSELDAVEGDVLDLACGSGQNGLFVAQSDQDKGRRNRKVVLLDRNIGEA RRTAELPEATRELVVHQE TDLETEENPSPLPEEAFGAVLVFNYLHRPLVANLRDSV+PGGLVLYKTFTWQHPSVGVRPSNPAFLLGPGELKDEMFAGWEVIDFFEGVVVVEGTASADGGGVRRAAVSSIVCRKPV AVVDKSVPTETSTPV++
Sbjct: 1 MSELDAVEGDVLDLACGSGQNGLFVAQSDQDKGRRNRKVVLLDRNIGEAARRTAELPEATRELVVHQEVALVWFGTEVDSQGFPPLYFSPCLYLLAQTDLETEENPSPLPEEAFGAVLVFNYLHRPLVANLRDSVQPGGLVLYKTFTWQHPSVGVRPSNPAFLLGPGELKDEMFAGWEVIDFFEGVVVVEGTASADGGGVRRAAVSSIVCRKPVAAVVDKSVPTETSTPVQV 232
BLAST of mRNA_Ecto-sp13_S_contig13082.2521.1 vs. uniprot
Match: A0A7X7SNU5_9ACTN (Methyltransferase domain-containing protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X7SNU5_9ACTN) HSP 1 Score: 123 bits (309), Expect = 1.040e-29 Identity = 80/182 (43.96%), Postives = 107/182 (58.79%), Query Frame = 1
Query: 232 DAVEGDVLDLACGSGQNGLFVAQSDQDKGRRNRKVVLLDRNIGE--AVRRTAELPEATRELVVHQETDLETEENPSPLPEEAFGAVLVFNYLHRPLVANLRDSVKPGGLVLYKTFTWQHPSVGVRPSNPAFLLGPGELKDEMFAGWEVIDFFEGVVVVEGTASADGGGVRRAAVSSIVCRKP 771
D +EG VLDLACG G+NGLF+A S V+L DR+ A RR+AE E DLET+ N PL +E + +LVF YLHRPL+ ++R+ V+ GG+++Y+TFT + P G +P NPA+LL PGEL FA WE++ FEG++ R AV+ IVCRKP
Sbjct: 17 DDLEGPVLDLACGDGENGLFLAASGVP-------VILADRSTAALTAARRSAERRGIAARF---WEVDLETDAN--PLRQEYYRGILVFRYLHRPLMPHIREGVRKGGVLIYETFTTEQPRYG-KPRNPAYLLEPGELTG-WFADWEILHCFEGLLEDP-----------RRAVAQIVCRKP 173
BLAST of mRNA_Ecto-sp13_S_contig13082.2521.1 vs. uniprot
Match: A0A7X8ULF5_9ACTN (Class I SAM-dependent methyltransferase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X8ULF5_9ACTN) HSP 1 Score: 122 bits (307), Expect = 2.070e-29 Identity = 81/186 (43.55%), Postives = 110/186 (59.14%), Query Frame = 1
Query: 217 FMSELDAVEGDVLDLACGSGQNGLFVAQSDQDKGRRNRKVVLLDRNIGEAVRRTAELPEATRELVVH-QETDLETEENPSPLPEEAFGAVLVFNYLHRPLVANLRDSVKPGGLVLYKTFTWQHPSVGVRPSNPAFLLGPGELKDEMFAGWEVIDFFEGVVVVEGTASADGGGVRRAAVSSIVCRKP 771
++ E +A+EG +LDLACG G+NGL++A V+L DR++ EA+R TA A R L E DLET N PL E+ + A+LVF YLHRPL+ LR++V+ GG+++Y+TFT + P G RP NP +LL PGEL F W+ + +FEGV+ A A IVCRKP
Sbjct: 12 YLLEDEALEGPILDLACGRGENGLYLAGLGLP-------VILADRSL-EALR-TARRSAAERGLTARFWEVDLETGAN--PLEEDHYRAILVFRYLHRPLIPRLRNAVREGGILIYETFTNEQPKYG-RPHNPEYLLQPGELAG-WFEDWQTVHYFEGVLEAPLRAMAQ-----------IVCRKP 173
BLAST of mRNA_Ecto-sp13_S_contig13082.2521.1 vs. uniprot
Match: A0A1V4XH51_9DELT (Putative S-adenosyl-L-methionine-dependent methyltransferase TehB n=1 Tax=Syntrophus sp. PtaB.Bin001 TaxID=1811710 RepID=A0A1V4XH51_9DELT) HSP 1 Score: 123 bits (309), Expect = 2.800e-29 Identity = 79/180 (43.89%), Postives = 106/180 (58.89%), Query Frame = 1
Query: 235 AVEGDVLDLACGSGQNGLFVAQSDQDKGRRNRKVVLLDRNIGEAVRRTAELPEATRELVVHQETDLETEENPSPLPEEAFGAVLVFNYLHRPLVANLRDSVKPGGLVLYKTFTWQHPSVGVRPSNPAFLLGPGELKDEMFAGWEVIDFFEGVVVVEGTASADGGGVRRAAVSSIVCRKPV 774
++EG VLDLACG+G+NGLF+A D V+L DR+ GEA+ + E E DLET N PL EE + A+LVF YLHRPL+ +R ++ GG+++Y+TFT + P G RP NP +LL PGEL D F W+ I +FEG++ E A V+ IVCRKP+
Sbjct: 55 SLEGPVLDLACGNGKNGLFLAGLDLP-------VILADRS-GEALEEAKKAAEDKGLQARFWEVDLETGRN--PLEEEYYRAILVFRYLHRPLIPCIRKGIRKGGILIYETFTIEQPKYG-RPHNPDYLLKPGELAD-WFKDWQTIHYFEGLL--ENPPRA---------VAQIVCRKPI 211
BLAST of mRNA_Ecto-sp13_S_contig13082.2521.1 vs. uniprot
Match: A0A1V5DMX6_9DELT (Putative S-adenosyl-L-methionine-dependent methyltransferase TehB n=1 Tax=Syntrophus sp. PtaU1.Bin208 TaxID=1811713 RepID=A0A1V5DMX6_9DELT) HSP 1 Score: 120 bits (300), Expect = 2.510e-28 Identity = 81/195 (41.54%), Postives = 110/195 (56.41%), Query Frame = 1
Query: 190 PPVAELVR-QFMSELDAVEGDVLDLACGSGQNGLFVAQSDQDKGRRNRKVVLLDRNIGEAVRRTAELPEATRELVVHQETDLETEENPSPLPEEAFGAVLVFNYLHRPLVANLRDSVKPGGLVLYKTFTWQHPSVGVRPSNPAFLLGPGELKDEMFAGWEVIDFFEGVVVVEGTASADGGGVRRAAVSSIVCRKP 771
PP + LV + + VEG +LDLACG GQNGLF+A N V+L D + EA++ + E V +E DLET +N PL E+ + A+LVF YLHRPL+ LR +++ GG+++Y+TFT + P G RP NP FLL P EL D F WE++ FEG++ A A +VCRKP
Sbjct: 11 PPDSLLVNFSHLLQRQDVEGPILDLACGKGQNGLFLAGL-------NLPVILADGS-PEALKEARQTAEEKGLQVQFREVDLETGDN--PLQEDYYRAILVFRYLHRPLIPYLRRAIRKGGILIYETFTIEQPRYG-RPHNPDFLLKPEELAD-WFRDWEILHSFEGLLENPPRAMAQ-----------LVCRKP 182
BLAST of mRNA_Ecto-sp13_S_contig13082.2521.1 vs. uniprot
Match: A0A1V4XZK1_9DELT (Putative S-adenosyl-L-methionine-dependent methyltransferase TehB n=2 Tax=unclassified Syntrophus (in: Bacteria) TaxID=2676560 RepID=A0A1V4XZK1_9DELT) HSP 1 Score: 119 bits (299), Expect = 3.480e-28 Identity = 81/179 (45.25%), Postives = 105/179 (58.66%), Query Frame = 1
Query: 241 EGDVLDLACGSGQNGLFVAQSDQDKGRRNRKVVLLD--RNIGEAVRRTAELPEATRELVVHQETDLETEENPSPLPEEAFGAVLVFNYLHRPLVANLRDSVKPGGLVLYKTFTWQHPSVGVRPSNPAFLLGPGELKDEMFAGWEVIDFFEGVVVVEGTASADGGGVRRAAVSSIVCRKP 771
EG +LDLACG+GQNGLF+A N V+L D R E RR+AE A V +E DLET EN PL E+ + A++VF YLHRPL+ +LR +++ GG+++Y+TFT + P G RP NP FLL PGEL F WE+I FEG++ A A +VCRKP
Sbjct: 29 EGPILDLACGAGQNGLFLAGL-------NLPVILADQSREALEDARRSAE---ARGLQVQFREIDLETGEN--PLQEDYYRAIMVFRYLHRPLMPSLRRAIRRGGILIYETFTIEQPRYG-RPRNPDFLLRPGELAG-WFRDWEIIHSFEGLLENPTRAMAQ-----------LVCRKP 182
BLAST of mRNA_Ecto-sp13_S_contig13082.2521.1 vs. uniprot
Match: UPI0019D93D20 (Class I SAM-dependent methyltransferase n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=UPI0019D93D20) HSP 1 Score: 119 bits (299), Expect = 5.660e-28 Identity = 83/195 (42.56%), Postives = 111/195 (56.92%), Query Frame = 1
Query: 205 LVRQFMSELD--AVEGDVLDLACGSGQNGLFVAQSDQDKGRRNRKVVLLDRNIGEAVRRTAELPEATREL----VVHQETDLETEENPSPLPEEAFGAVLVFNYLHRPLVANLRDSVKPGGLVLYKTFTWQHPSVGVRPSNPAFLLGPGELKDEMFAGWEVIDFFEGVVVVEGTASADGGGVRRAAVSSIVCRKP 771
L+R ++ EL+ A G +LDLACGSG+NGL++ ++ N VV D + A L E EL + DLE +P + FG +LV+NYLHRPL+ NL+ +V PGGLV Y+TFT + G RPSNP FLL PGEL+D F W+V+ FEGVV E G G R A++ +V +KP
Sbjct: 8 LLRPYLKELEFAANAGPILDLACGSGRNGLYLIEN-------NIPVVFADVRPEALAQVQATLEEKGLELEGQLASSWQVDLELT-GVNPFDDRLFGGILVYNYLHRPLMQNLKRAVLPGGLVFYETFTTEQVKFG-RPSNPDFLLRPGELRD-CFKQWQVLHDFEGVVENE-----SGSGAR--AIAQLVAKKP 185
BLAST of mRNA_Ecto-sp13_S_contig13082.2521.1 vs. uniprot
Match: A0A2E4JWY9_9GAMM (Methyltransf_25 domain-containing protein n=9 Tax=root TaxID=1 RepID=A0A2E4JWY9_9GAMM) HSP 1 Score: 119 bits (297), Expect = 7.680e-28 Identity = 84/204 (41.18%), Postives = 114/204 (55.88%), Query Frame = 1
Query: 178 PIMMPPVAELVRQFMSELDAVEGD--VLDLACGSGQNGLFVAQSDQDKGRRNRKVVLLDRNIGEAVRRTAELPEATRELVVHQETDLETEENPSPLPEEAFGAVLVFNYLHRPLVANLRDSVKPGGLVLYKTFTWQHPSVGVRPSNPAFLLGPGELKDEMFAGWEVIDFFEGVVVVEGTASADGGGVRRAAVSSIVCRKPVPAV 783
P+ + L+ + MS L + D VLDLACGSG+NGL +A+ N V D + G+ EL + E V Q DLET + PL + F VLVFNYLHRPL+A++R+ V+PGGL++Y+TFT P G +P+NP +LL PGEL E F WEV +FEG + G R A +S++ RKP A+
Sbjct: 2 PLSNASASRLLVENMSLLKTLSFDNGVLDLACGSGRNGLLLARD-------NIHVTFADCDRGKLGLLAGELRDQGLEGVCWQ-VDLETTSS-DPLSHKWFDLVLVFNYLHRPLMASIREVVRPGGLIVYETFTVHQPQFG-KPTNPDYLLRPGELL-ESFGEWEVEHYFEGEI-------QSGSKKNRCAKASLIARKPKQAL 187
BLAST of mRNA_Ecto-sp13_S_contig13082.2521.1 vs. uniprot
Match: A0A1H7XZK2_9DELT (Methyltransferase domain-containing protein n=1 Tax=Syntrophus gentianae TaxID=43775 RepID=A0A1H7XZK2_9DELT) HSP 1 Score: 117 bits (294), Expect = 1.790e-27 Identity = 76/178 (42.70%), Postives = 101/178 (56.74%), Query Frame = 1
Query: 238 VEGDVLDLACGSGQNGLFVAQSDQDKGRRNRKVVLLDRNIGEAVRRTAELPEATRELVVHQETDLETEENPSPLPEEAFGAVLVFNYLHRPLVANLRDSVKPGGLVLYKTFTWQHPSVGVRPSNPAFLLGPGELKDEMFAGWEVIDFFEGVVVVEGTASADGGGVRRAAVSSIVCRKP 771
+EG +LDLACG GQNGLF+A N V+L D + EA+ E V E DLE N PLPE+ + A+LVF YLHRPL+ +LR +++ GG+++Y+TFT + P G RP NP +LL GEL D F WE+I +FEG++ A A +VCRKP
Sbjct: 28 LEGPILDLACGKGQNGLFLAGL-------NLPVILADGS-PEALNEARRSAEGKGFKVQFWEVDLEAGGN--PLPEDYYRAILVFRYLHRPLIPSLRRAIRKGGILIYETFTIEQPRYG-RPHNPDYLLKAGELAD-WFRDWEIIHYFEGLLENPPRAMAQ-----------LVCRKP 182 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13082.2521.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig13082.2521.1 >prot_Ecto-sp13_S_contig13082.2521.1 ID=prot_Ecto-sp13_S_contig13082.2521.1|Name=mRNA_Ecto-sp13_S_contig13082.2521.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=245bp MGQRSATCLLSFLALVVVRSSFGRENHPIMMPPVAELVRQFMSELDAVEGback to top mRNA from alignment at Ecto-sp13_S_contig13082:1482..4332+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig13082.2521.1 ID=mRNA_Ecto-sp13_S_contig13082.2521.1|Name=mRNA_Ecto-sp13_S_contig13082.2521.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2851bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13082:1482..4332+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig13082:1482..4332+ >mRNA_Ecto-sp13_S_contig13082.2521.1 ID=mRNA_Ecto-sp13_S_contig13082.2521.1|Name=mRNA_Ecto-sp13_S_contig13082.2521.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=735bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13082:1482..4332+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |