prot_Ecto-sp13_S_contig10227.252.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig10227.252.1
Unique Nameprot_Ecto-sp13_S_contig10227.252.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length155
Homology
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BLAST of mRNA_Ecto-sp13_S_contig10227.252.1 vs. uniprot
Match: A0A6H5KW87_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW87_9PHAE)

HSP 1 Score: 263 bits (672), Expect = 7.410e-86
Identity = 142/147 (96.60%), Postives = 142/147 (96.60%), Query Frame = 0 
Query:    1 EQLSDSGVSHSKKLAELADVTQELNRTKVALERAERLVFDQRREADERQCDEDRRRAETEALRDKLTRVERKNTELMAKQAAGRLAKRMRGNFGRSSTFCASFCSCFRGKPAYRRVASPAPFAPPPGSSPGDSPWLREETVGSLSGG 147
            EQLSDSGVS SKKLAELADVTQEL RTK ALERAERLVFDQRREADERQCDEDRRRAETEALRDKLTRVERKNTELMAKQAAGRLAKRMRGNFGRSSTFCASFCSCFRGKPAYRRVASPAPFAPP GSSPGDSPWL EETVGSLSGG
Sbjct:  164 EQLSDSGVSQSKKLAELADVTQELKRTKAALERAERLVFDQRREADERQCDEDRRRAETEALRDKLTRVERKNTELMAKQAAGRLAKRMRGNFGRSSTFCASFCSCFRGKPAYRRVASPAPFAPPLGSSPGDSPWLGEETVGSLSGG 310
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BLAST of mRNA_Ecto-sp13_S_contig10227.252.1 vs. uniprot
Match: D8LU91_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU91_ECTSI)

HSP 1 Score: 253 bits (645), Expect = 5.870e-83
Identity = 138/147 (93.88%), Postives = 138/147 (93.88%), Query Frame = 0 
Query:    1 EQLSDSGVSHSKKLAELADVTQELNRTKVALERAERLVFDQRREADERQCDEDRRRAETEALRDKLTRVERKNTELMAKQAAGRLAKRMRGNFGRSSTFCASFCSCFRGKPAYRRVASPAPFAPPPGSSPGDSPWLREETVGSLSGG 147
            EQLSDSGVS SKKLAELADVTQEL  TK ALERAERLVFDQRREADERQ DEDRRRAETEALRDKLTRVERKNTELMAKQAAGRLAKRMRGNFGRSSTFCA FCSCFRGKPAYRRVASPAPFAPPPGSSPGD PWL EETV SLSGG
Sbjct:   85 EQLSDSGVSQSKKLAELADVTQELKLTKAALERAERLVFDQRREADERQRDEDRRRAETEALRDKLTRVERKNTELMAKQAAGRLAKRMRGNFGRSSTFCALFCSCFRGKPAYRRVASPAPFAPPPGSSPGDIPWLGEETVASLSGG 231
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10227.252.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KW87_9PHAE7.410e-8696.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LU91_ECTSI5.870e-8393.88Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 59..79
NoneNo IPR availableCOILSCoilCoilcoord: 14..37

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10227contigEcto-sp13_S_contig10227:54..1451 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10227.252.1mRNA_Ecto-sp13_S_contig10227.252.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig10227 54..1451 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig10227.252.1 ID=prot_Ecto-sp13_S_contig10227.252.1|Name=mRNA_Ecto-sp13_S_contig10227.252.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=155bp
EQLSDSGVSHSKKLAELADVTQELNRTKVALERAERLVFDQRREADERQC
DEDRRRAETEALRDKLTRVERKNTELMAKQAAGRLAKRMRGNFGRSSTFC
ASFCSCFRGKPAYRRVASPAPFAPPPGSSPGDSPWLREETVGSLSGGGGG
GRGL*
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