mRNA_Ecto-sp13_S_contig1307.2512.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1307.2512.1 vs. uniprot
Match: D8LLI2_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLI2_ECTSI) HSP 1 Score: 1146 bits (2964), Expect = 0.000e+0 Identity = 597/663 (90.05%), Postives = 610/663 (92.01%), Query Frame = 3
Query: 135 MISKEHLVGALSQLGVSVTRMELEEIMNHYSTQDASRVDNFRCQIPHADLLRDATAGGPSLFESGQSITERLMGSARSQGSLLGKSRSAKDESPMIRAFRTKLQQVIDKRVKYAGGSPSRILKSLFLNWDTERIGALDAKQLRGALRTLNMRLSATQAKELTRFYAKNGDPATGCDCMQLVDDVCGYDQGPFVHQLPKEQTDKTGGRDGSAPVMTSDGNPGKSTGEGSDRSYASLHFTARPHEKPSNRVVDRFKVRLRDALEQTIKKKGGVSHAIIREAFLDWDADASGKLDPRELVGALKRMGVYATEDEANAVVEHYDLDGTGEMSYELLCKEIETMSHPMLSYIEEVDVLNGLDRTVREPAVVKNAVERIRVGVTAAARRAAGSASTLPLMSPRDLLEGTILRFDHQDSGLVGVDELRQVWRELKICLRTSETKAVVAWLDRSTTKKLHSSDLCDAVFGMGRSGHDCNGNSPPGLLAANNLGERHSKPRPKPHVVQAHRSAALAMGATSSGSSSEDSGGIAYPPLPLPSKKDRREAAAKKFDRRAAWNWQGPAADAVARRVDSGGKNEGSNKPVAGGGGGWTGGDGGSAVSRGAAPLRLGGVLQASGEAVVAEKARIEKRLKELRREKALLLREKNGMESWGERGRGPNPSCAPMNKCAG 2123
MISKEHLVGALSQLGVSVTRMELEE MNHYSTQDASRV+N RCQIPHADLLRDA AG PSLFE GQSITERLMGSARSQGSLLGKSRSAKDESPMIRAFRTKLQQVIDKRVKYAGGSPSRILKSLFLNWDTERIGALD KQLRGALRTLNMRLSATQAKELTRFYAKNGDPA GCDCMQLVDDVCGYDQG FV+QLPKEQTDKTGG DGSAPV+ SDGNPG ST EGSDR++ASL FTARPHEKPSNRVVDRFK+RLRDALEQTIK KGGVSHAIIREAFLDWDADASGKLDPRELVGALKRMGVYATEDEANAVVE+YDLDGTGEMSYELLCKEI+TMSHPMLSYIEEVDVLNGLDRTVREPAVVKNAVERIRVGVTAAA+RAAGSASTLPL+SPRDLLEGTILRFDHQDSGLVGVDELRQVWRELKICLRTSETKAVVAWLDRST KKLH+SDLCDAVFG+ RSGHDCNGNSPPGLLA NNLGERHSKPRPKPHVVQAHRSAALAMGA SSGSSSEDSG IAYPPLPLPSKKDRRE AAKKFDRRAAWNWQGPAADAVA+RVD GGKNEGSNKPVAGG SGEAVVAEKARIEKRLKELRREKALLLREKNGME WGERGRG NPS PMNKCAG
Sbjct: 1 MISKEHLVGALSQLGVSVTRMELEETMNHYSTQDASRVENARCQIPHADLLRDAAAGAPSLFECGQSITERLMGSARSQGSLLGKSRSAKDESPMIRAFRTKLQQVIDKRVKYAGGSPSRILKSLFLNWDTERIGALDTKQLRGALRTLNMRLSATQAKELTRFYAKNGDPAAGCDCMQLVDDVCGYDQGLFVNQLPKEQTDKTGGWDGSAPVVASDGNPGNSTSEGSDRNHASLQFTARPHEKPSNRVVDRFKMRLRDALEQTIKTKGGVSHAIIREAFLDWDADASGKLDPRELVGALKRMGVYATEDEANAVVEYYDLDGTGEMSYELLCKEIKTMSHPMLSYIEEVDVLNGLDRTVREPAVVKNAVERIRVGVTAAAKRAAGSASTLPLISPRDLLEGTILRFDHQDSGLVGVDELRQVWRELKICLRTSETKAVVAWLDRSTAKKLHTSDLCDAVFGVSRSGHDCNGNSPPGLLAPNNLGERHSKPRPKPHVVQAHRSAALAMGAASSGSSSEDSGSIAYPPLPLPSKKDRREVAAKKFDRRAAWNWQGPAADAVAQRVDPGGKNEGSNKPVAGGX---------------XXXXXXXXXXXXSGEAVVAEKARIEKRLKELRREKALLLREKNGMECWGERGRGSNPSYVPMNKCAG 648
BLAST of mRNA_Ecto-sp13_S_contig1307.2512.1 vs. uniprot
Match: A0A7S1TRY6_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TRY6_9STRA) HSP 1 Score: 216 bits (551), Expect = 5.420e-57 Identity = 160/538 (29.74%), Postives = 259/538 (48.14%), Query Frame = 3
Query: 3 PSQVVNTVLKRIRYMSDRQVKEHGGQAGSNLRRIFIHWDQNNSGMISKEHLVGALSQLGVSVTRMELEEIMNHYSTQDASRVDNFRCQIPHADLLRDATAGGPSLFESGQSITERLMGSARSQGSLLGKSRSAKDESP-------MIRAFRTKLQQVIDKRVKYAGGSPSRILKSLFLNWDTERIGALDAKQLRGALRTLNMRLSATQAKELTRFYAKNGDPATGCDCMQLVDDVCGYDQGPFVHQLPKEQTDKTGGRDGSAPVMTSDGNPGKSTGEGSDRSYASLHFTARPHEKPSNRVVDRFKVRLRDALEQTIKKKGGVSHAIIREAFLDWDADASGKLDPRELVGALKRMGVYATEDEANAVVEHYDLDGTGEMSYELLCKEIETMSHPMLSYIEEVDVLN----------------------GLDR--------------TVREPAVVKNAVERIRVGV-TAAARRAAGSASTLPLMSPRDLLEGTILRFDHQDSGLVGVDELRQVWRELKIC-LRTSETKAVVAWLDRSTTK 1481
P++ V V++RI+ ++ +K+ GG A S LR F++WD + SG ++ + LV A LGV ++R E +++ +Y + +I + DLL D + G P + T RL DE P +++ F +L+Q++ K+++ GG+ I++ +FL WD ++ G LD ++LRGA R +RLSA +A + +Y+ + A +LV D+ H L G D + ++ + R+ + FTARP KP N +V+ KVR+R LE+ +K+KGG + IRE FL WD DASGKLD E+ GAL+R+ +Y ++DEA+A+V +YD GEMSYELL +++ + P L E+ D +N +R TVR P V+ + ++ V +AAA++ S +S RD GT+LR D + SG++ E+ R++ I +R + + W R K
Sbjct: 66 PNEAVTRVMQRIKVAVNQVMKKRGGTAMSILRSAFLNWDSDASGEMNPDELVNACRMLGVLLSRREAVDLIEYYDQEGDG-------EIKYTDLLEDISKGAPHFLQHAVGSTPRL----------------PPDEIPEPKVMPGLVKDFIGRLRQLLLKKMRVDGGTEFSIIRKVFLGWDADQSGQLDKEELRGAARDFGLRLSAREAGIIVDYYSDT-EGAHEMSYQKLVKDLT----NGTTHYLQH-----ISGNDVRRELESA-------RARSTCRTEREVFFTARPKRKPRNMMVEALKVRIRRRLEELMKEKGGTVTSHIREVFLFWDGDASGKLDAGEVKGALQRLHIYCSDDEASAMVHYYDAGTAGEMSYELLIQDV-SRGVPSLLEQEKFDSINWTTTMSDLGNFRPAPEVASTAPSTERFSEMRLPVANSGAVTVRIPGSVRTILSNLQTAVESAAAQKNLKVTSMAQQVSGRDYFHGTLLRKDTRGSGVLSGREILAAIRDMHITSVREDDVTRLAQWFHRGDGK 562
BLAST of mRNA_Ecto-sp13_S_contig1307.2512.1 vs. uniprot
Match: A0A482SPZ1_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SPZ1_9ARCH) HSP 1 Score: 162 bits (410), Expect = 6.140e-38 Identity = 128/494 (25.91%), Postives = 228/494 (46.15%), Query Frame = 3
Query: 60 VKEHGGQAGSNLRRIFIHWDQNNSGMISKEHLVGALSQLGVSVTRMELEEIMNHYSTQDASRVDNFRCQIPHADLLRDATAGGPSLFESGQSITERLMGSARSQGSLLGKSRSAK--DESPMIRAFRTKLQQVIDKRVKYAGGSPSRILKSLFLNWDTERIGALDAKQLRGALRT-LNMRLSATQAKELTRFYAKNGDPATGCDCMQLVDDVCGYDQGP---FVHQLPKEQTDKTGGRDGSAPVMTSDGNPGKSTGEGSDRSYASLHFTARPHEKPSNRVVDRFKVRLRDALEQTIKKKGGVSHAIIREAFLDWDADASGKL-DPRELVGALKRMGVYATEDEANAVVEHYDLDGTGEMSYELLCKEIETMSHPMLSYIEEVDVLNGLDRTVREPAVVKNAVERIRVGVTAAARRAAGSASTLPLMSPRDLLEGTILRFDHQDSGLVGVDELRQVWRELKICLRTSETKAVVAWLDRSTTKKLHSSDLCDAVFG 1520
++ GG S +R +FI+WD + SG I L + LGV VT E EI+N+Y + A R ++ + +LL+D G PS+ + + R Q L + S K P+++ F ++ + ++ GG+P + ++ +F +D + LD K+L A R + + ++ QAK++ +Y + G + + ++DVC D P F P+ + ++RS F + P N+V+++FK + D L + I GG + IR+AF+ WD + +GK+ DP L GA KR+GV ++++A+ ++ YD+ TGEM Y L +++ LS ++ + + T R P V+N + I+ + +++ G + +DLL GT +RFD Q SG V +R+ + EL++ + W D + + + L V+G
Sbjct: 129 MRHKGGTPYSIIRSMFIYWDADKSGNIDANELQSCMKSLGVKVTLDECREIVNYY--RPAERPGE---EMDYQELLQDIQRGEPSII----AFVSQKEEEDRDQKELRFEEVSDKFVQMPPIVKKFLEAVRNYLMVTMRKQGGTPYQHIRFMFTFYDFDYSNGLDPKELVAACRRRMKLVITEDQAKQIVEYYDRKGLGQIYYE--KFLEDVC-QDVKPILTFTELTPRSV-------------------------DAANRSLQMNPFIPKAFRPPPNKVLEKFKQEVTDTLAKRIHGTGGTFASWIRDAFVSWDRNGTGKISDPEHLKGAAKRLGVELSDEDAHILIRCYDVHNTGEMHYHQLMEDMMRQDTHFLSDPKQ-HLPSLATPTQRTPQGVQNTIRHIQQALEKFVKKSKGR------IDSKDLLHGTFMRFDPQRSGRVDQTGMRRAFDELRVSYTERDVVDTCRWFDTNGSDTCDYNTLTQQVYG 578
BLAST of mRNA_Ecto-sp13_S_contig1307.2512.1 vs. uniprot
Match: A0A836CKG4_9STRA (EF-hand domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKG4_9STRA) HSP 1 Score: 150 bits (378), Expect = 5.610e-34 Identity = 129/434 (29.72%), Postives = 180/434 (41.47%), Query Frame = 3
Query: 315 LFESGQSITERLMGSARSQGSLLGKSRSAK------DESPMIRAFRTKLQQVIDKRVKYAGGSPSRILKSLFLNWDTERIGALDAKQLRGALRTLNMRLSATQAKELTRFYAKNGDPATGCDCMQL------------------------VDDVCGYDQGPFVHQLPKEQTDKTGGRDGSAPVMTSDGNPGKSTGEGSDRS----------YASLHFTARPHEKPSNRVVDRFKVRLRDALEQTIKKKGGVSHAIIREAFLDWDADASGKLDPRELVGALKRMGVYATEDEANAVVEHYDLDGTGEMSYELLCKEIETMSHPMLSYIEEVDVLNGLDRTVREPAVVKNAVERIRVGVTAAARRA------AGSASTLPLMSPRDLLEGTILRFDHQDSGLVGVDELRQVWRELKICLRTSETKAVVAWLDRSTT 1478
L SG E L+G+ RS G + + + + +I AFR KL+ ++ +R++ GGS ILK+LFL W+T R A A +RGALR L M L+ +QA E+ +Y A C +D +D +H + K G ++ P + E R + FTARP KP NR V++FK+RLRD LE I+ +GG+ HA EM Y LLC+EIE MSH +LSY+E+ DVL GLD VREP + +R GV A AG+A ++PRDL GT LRFD +G+V LR+V EL + L+ +E + W + T
Sbjct: 102 LDNSGAIAVEELLGACRSIGVPITRQEAEEVVYCYDARDTVIIAFRAKLKDLLARRIREQGGSEMGILKALFLKWNTSRSFATSADDVRGALRKLGMNLTRSQADEVVGYYTPRSAAAQARMCASAYCDNGXXXXXXXXXXXXXXXXXXXLDAASYFDFRELIHDIVK----------GERSILAF---PSQEEMEAVQREGLVQETHRECLNDMAFTARPVRKPRNREVEKFKLRLRDRLELIIEHRGGIHHA--------------------------------------------------REMDYTLLCREIEGMSHDILSYVEDCDVLRGLDHAVREPPLNAEVRAYVRGGVERAXXXXXXXXXXAGAA-----IAPRDLFLGTCLRFDAGSTGMVDGAGLRRVCSELGVALKLAEADKMCMWYELGLT 467
BLAST of mRNA_Ecto-sp13_S_contig1307.2512.1 vs. uniprot
Match: F0YH50_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YH50_AURAN) HSP 1 Score: 111 bits (278), Expect = 1.770e-21 Identity = 83/266 (31.20%), Postives = 129/266 (48.50%), Query Frame = 3
Query: 402 KDESPMIRA--FRTKLQQVIDKRVKYAGGSPSRILKSLFLNWDTERIGALDAKQLRGALRTLNMRLSATQAKELTRFYAKNGDPATGCDCMQLVDDVCGYDQGPFVHQLPKEQTDKTGGRDGSAPVMTSDGNPGKSTGEGSDRSYASLHFTARPHEKPSNRVVDRFKVRLRDALEQTIKKKGGVSHAIIREAFLDWDADASGKLDPRELVGALKRMGVYATEDEANAVVEHYDLDGTGEMSYELLCKEI-ETMSHPMLSYIEEVDV 1190
K + P +R F +L++ +DKRV+ GG+ S +L++ FL+WD + GAL ++ + A+ +L ++ +A + +Y D V+DV + H T ++G D S G+P +V RF +LR L +IKK G +IR AFL+WDADASG+LD RELVGAL ++GV +E EA+ +V YD G M Y+ L +++ E + H + E+ DV
Sbjct: 405 KKDRPDLRIVDFCQRLRRHLDKRVRELGGTESSVLRTAFLDWDGDCSGALSVREFKRAVESLGFVVADDEASYVVGYYG--ADSGGEMRYATFVEDVARLGRHFMEHSDVGAATARSGAGDRS-------GHPA---------------------------IVRRFIKKLRAKLLTSIKKNGEYERILIRRAFLNWDADASGQLDARELVGALAQLGVTLSESEASQIVAAYDASNQGAMRYQALVEDVCEGVPH-FIESAEDPDV 633
BLAST of mRNA_Ecto-sp13_S_contig1307.2512.1 vs. uniprot
Match: A0A7S2BI80_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BI80_9STRA) HSP 1 Score: 108 bits (269), Expect = 6.930e-21 Identity = 98/363 (27.00%), Postives = 163/363 (44.90%), Query Frame = 3
Query: 429 FRTKLQQVIDKRVKYAGGSPSRILKSLFLNWDTERIGALDAKQLRGALRTLNMRLSATQAKELTRFYAKNGDPATGCDCMQLVDDVCGYDQGPFVHQLPKEQTDKTGGRDGSAPVMTSDGNPGKSTGEGSDRSYASLHFTARPHEKP--SNRVVDRFKVRLRDALEQTIKKKGGVSHAIIREAFLDWDADASGKLDPRELVGALKRMGVYATEDEANAVVEHYDLDGTGEMSYELLCKEIET-----MSHPMLSYIEEVDV-------LNGLDRTVREPAVVKNA-VERIRVGVTAAAR----RAAGSASTLPLMSPRDLLEGTILRFDHQDSGLVGVDELRQVWRELKICLRTSETKAVVAW 1460
F KLQ+ + +R+K +GG+ +L+ FLNWD + G L + + GALR+L +S +A+ + +Y GD LV+DV + H P++++ +T SAP + SD +ARPH K + + F +LR L + +++ G ++R AFL+WDAD+SG + EL GA+ ++G++ EA +V+ YD+ GE Y+ L ++ M HP +DV + G T R NA VER + +T R G+ +++ + L +D SG + V E + + + L +E VV +
Sbjct: 2 FIQKLQRFLRRRMKESGGTEGSVLRQAFLNWDADCSGELSSTEFMGALRSLGCLISQREAQIIVDYYDLEGDGEMTYP--PLVEDVSRGSRHFLQH--PEKESART-----SAP-------------DHSD--------SARPHRKNPHGDDFMSAFLQKLRKILMKHMRRYGENEKILVRRAFLNWDADSSGCISAAELKGAMNQLGMFINNTEAARIVDFYDVYKKGEFGYKTLVDDVSNGVPTFMEHPESEGKSHLDVPDEDDLAVAGRMFTARPTQRSDNALVERFKRSLTQCLEDKMIREGGTIASI--------MREAFLFWDSDSSGALDVAEFKGAINRVGLALSNAEASQVVRY 326
BLAST of mRNA_Ecto-sp13_S_contig1307.2512.1 vs. uniprot
Match: A0A7R9U8E9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U8E9_9STRA) HSP 1 Score: 100 bits (250), Expect = 2.010e-18 Identity = 64/219 (29.22%), Postives = 113/219 (51.60%), Query Frame = 3
Query: 861 EKPSNRVVDRFKVRLRDALEQTIKKKGGVSHAIIREAFLDWDADASGKLDPRELVGALKRMGVYATEDEANAVVEHYDLDGTGEMSYELLCKEIETMSHPMLSYIEEVDVLNGLDRTVRE---PAVVKNAVERIRVGVTAAARRAAGSASTLPLMSPRDLLEGTILRFDHQDSGLVGVDELRQVWRELKICLRTSETKAVVAWLDRSTTKKLHSSDLCD 1508
+K VV+R RLR AL + +KK GG +I+R +FL WDADASG+++P ELV A + +GV T EA +++E+YD +G GE+ Y L +++ + L + D + P +V++ + R++ + RR G+ ++ + L++D +G++ +ELR R+ + L E VVA+ + + +H +L +
Sbjct: 10 KKKCGGVVERVMQRLRVALTKKMKKSGGTPLSILRASFLHWDADASGQMNPFELVKACRTLGVALTLQEARSLIEYYDEEGDGEIRYTDLTEDLRKTTPSFLVHAAGTTPRLPPDEVPKAKEMPPLVQDFIRRMKALLLKKMRRDGGTEFSI--------VRQIFLKWDADQNGMLCAEELRGAARDFTLTLSRKEADVVVAYYTKEGSDGMHYQELLE 220
BLAST of mRNA_Ecto-sp13_S_contig1307.2512.1 vs. uniprot
Match: A0A8J2WKT0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WKT0_9STRA) HSP 1 Score: 98.6 bits (244), Expect = 1.260e-17 Identity = 77/264 (29.17%), Postives = 121/264 (45.83%), Query Frame = 3
Query: 429 FRTKLQQVIDKRVKYAGGSPSRILKSLFLNWDTERIGALDAKQLRGALRTLNMRLSATQAKELTRFYAKNGDPATGCDCMQLVDDVCGYDQ-GPFVHQLPKEQTDKTGGRDGSAPVMTSDGNPGKSTGEGSDRSYASLHFTARPHEKPSNRVVDRFKVRLRDALEQTIKKKGGVSHAIIREAFLDWDADASGKLDPRELVGALKRMGVYATEDEANAVVEHYDLDGTGEMSYELLCKEIET-MSHPMLSYIEE--VDVLNGLDR 1208
F ++++V+DK+ + GG+ L+ FLNWD + G +D+ + R A+R+L + +S A L +Y T ++ D+ D H L + P+ S ARP + P V+ RF ++R L + I KG ++R AFL+WD DASGKLD E A+ ++ + +EDEA +V+ YD G GEM Y+ L K+I + H Y + ++ L LDR
Sbjct: 73 FVRRIRRVLDKKSREHGGTEGTYLRECFLNWDADCSGTIDSTEFRKAIRSLGLDISQADASYLVGYYGGVESAYTSVQKNEMTYDLLIEDVVNASTHFLQPQP-----------PIPKS----------------------ARP-DGPFPPVLRRFIKKVRQKLFRHIAGKGENERYLVRNAFLNWDKDASGKLDYDEFRNAMWQLNLAMSEDEAVQIVDLYDSTGKGEMRYDQLVKDITAGVPHFTKQYNDAATLETLRKLDR 302
BLAST of mRNA_Ecto-sp13_S_contig1307.2512.1 vs. uniprot
Match: A0A7S1U271_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U271_9STRA) HSP 1 Score: 59.3 bits (142), Expect = 3.490e-5 Identity = 51/203 (25.12%), Postives = 92/203 (45.32%), Query Frame = 3
Query: 903 LRDALEQTIKKKGGVSHAIIREAFLDWDADASGKLDPRELVGALKRMGVYATEDEANAVVEHYDLDGTGEMSY-ELLCKEIETMSHPMLSYIEEVDVLNGLDRTVREPAVVKNAVERIRVGVTAAARRAAGSASTLPLMSPRDLLEGTILRFDHQDSGLVGVDELRQVWRELKICLRTSETKAVVAWLDRSTTKKLHSSDLCD 1508
L++ +++ +K+ +S +E F ++D D SG + E AL ++ V + E +VE +D DG G +SY E L E+ + P + R R+ + A + ++ V RRA + T SP++L FD SG + DE ++ ++L++ L SE +V D S + ++ C+
Sbjct: 1498 LKEEIQREVKRAFRLSRESPKELFAEFDDDESGSISRDEFKRALVKLRVRLDDSELYDIVEAFDADGDGHISYAEFL--EVAGVEKPPSRPSSXXXXPSRERRDSRDGGRNRRAFDGLKDHVQREVRRAFRVSRT----SPKELFA----EFDDDASGNISRDEFKRALKKLRVRLDDSELYDIVEAFDSSNDGHISYAEFCE 1690
BLAST of mRNA_Ecto-sp13_S_contig1307.2512.1 vs. uniprot
Match: F0YFF7_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YFF7_AURAN) HSP 1 Score: 53.9 bits (128), Expect = 6.340e-5 Identity = 22/54 (40.74%), Postives = 40/54 (74.07%), Query Frame = 3
Query: 960 IREAFLDWDADASGKLDPRELVGALKRMGVYATEDEANAVVEHYDLDGTGEMSY 1121
+R+AFL++D + SGK++ RE AL+R+G + D+ + +V+ +D+DG G++SY
Sbjct: 77 LRDAFLEFDDNDSGKINKREFRRALERLGFELSADDVDGLVDRFDVDGDGKVSY 130 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1307.2512.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1307.2512.1 >prot_Ecto-sp13_S_contig1307.2512.1 ID=prot_Ecto-sp13_S_contig1307.2512.1|Name=mRNA_Ecto-sp13_S_contig1307.2512.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=694bp MSDRQVKEHGGQAGSNLRRIFIHWDQNNSGMISKEHLVGALSQLGVSVTRback to top mRNA from alignment at Ecto-sp13_S_contig1307:514..11505+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1307.2512.1 ID=mRNA_Ecto-sp13_S_contig1307.2512.1|Name=mRNA_Ecto-sp13_S_contig1307.2512.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=10992bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1307:514..11505+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1307:514..11505+ >mRNA_Ecto-sp13_S_contig1307.2512.1 ID=mRNA_Ecto-sp13_S_contig1307.2512.1|Name=mRNA_Ecto-sp13_S_contig1307.2512.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=2082bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1307:514..11505+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |